FFCP PHASE1:Mm9::chr1:129101876..129101896,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=107895|HGNC=|UniProt=Q8R4G6,Q059T5|association_with_transcript=313bp_to_ENSMUST00000038361,NM_145128,uc007ckp.1,uc007ckq.1,uc007ckr.1_5end|description=CAGE_peak_4_at_Mgat5_5end|id=chr1:129101876..129101896,+|ontology_enrichment_celltype=CL:0000117!6.25e-10!23;CL:0000337!6.25e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.62e-11,23;CL:0000337,4.62e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.19e-17!94;UBERON:0007811!8.53e-17!86;UBERON:0001049!9.13e-14!52;UBERON:0005068!9.13e-14!52;UBERON:0006241!9.13e-14!52;UBERON:0007135!9.13e-14!52;UBERON:0000955!2.29e-13!50;UBERON:0006238!2.29e-13!50;UBERON:0002616!6.34e-13!49;UBERON:0000064!1.32e-12!99;UBERON:0000033!2.51e-12!63;UBERON:0001017!1.84e-11!73;UBERON:0005743!1.84e-11!73;UBERON:0003056!3.40e-11!49;UBERON:0002346!9.23e-11!71;UBERON:0003075!9.23e-11!71;UBERON:0007284!9.23e-11!71;UBERON:0000073!1.68e-10!75;UBERON:0001016!1.68e-10!75;UBERON:0003080!3.21e-10!40;UBERON:0002780!9.80e-10!39;UBERON:0001890!9.80e-10!39;UBERON:0006240!9.80e-10!39;UBERON:0002020!3.22e-09!34;UBERON:0004121!3.15e-08!102;UBERON:0000924!3.15e-08!102;UBERON:0006601!3.15e-08!102;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0000063!2.64e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.48e-15,54;UBERON:0001049,1.97e-13,52;UBERON:0005068,1.97e-13,52;UBERON:0006241,1.97e-13,52;UBERON:0007135,1.97e-13,52;UBERON:0002346,1.89e-12,64;UBERON:0003075,1.89e-12,64;UBERON:0007284,1.89e-12,64;UBERON:0000955,1.01e-11,47;UBERON:0006238,1.01e-11,47;UBERON:0001017,1.27e-11,73;UBERON:0002616,3.49e-11,46;UBERON:0010371,5.30e-11,73;UBERON:0001016,6.62e-11,75;UBERON:0004121,5.26e-10,95;UBERON:0000924,5.26e-10,95;UBERON:0006601,5.26e-10,95;UBERON:0003056,2.18e-09,49;UBERON:0003080,5.32e-09,40;UBERON:0002780,2.01e-08,39;UBERON:0001890,2.01e-08,39;UBERON:0006240,2.01e-08,39;UBERON:0000072,5.43e-08,27;UBERON:0011216,6.99e-08,194;UBERON:0002020,7.32e-08,34;UBERON:0002370,3.89e-07,23;UBERON:0000974,3.89e-07,23;UBERON:0004807,3.89e-07,23;UBERON:0005058,3.89e-07,23;UBERON:0003351,3.89e-07,23;UBERON:0009113,3.89e-07,23;UBERON:0003295,3.89e-07,23;UBERON:0009722,3.89e-07,23;UBERON:0005562,3.89e-07,23;UBERON:0007690,3.89e-07,23|phase1_expression=0,1.39590163055744,0,1.51232105653415,0.500895729946347,1.00727563147134,0.934450562382103,2.84071311571468,1.267098499365,1.63845168425395,1.71217968225505,1.19658238493005,0.171200729931206,1.04904482902797,0,0,0,0.473193248037357,0.822686601634433,0,0.255129870453209,1.19149141441062,0.261199789138935,1.11994695955385,0.91763712426868,0,0,1.50829862880122,1.33016393619462,1.00812051903972,0.665191531965914,0,0,0,1.44425809875637,1.49611180822643,2.24586291888606,0,0,0.523523743973798,0,0.683045484958446,0,1.00717454380462,1.11514624341466,1.46837401729345,0,1.09012578190223,0.878744730937887,0.777719596297134,0.699932108126813,0,0.335565212115473,2.17608642603403,1.34437519656986,0.514518872071894,0.286533439938757,0,2.02316460859598,2.11596391708813,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,1.76272340924412,0.675029691658453,1.68259969081106,0.856952953211411,1.54607978666129,0.979926393719632,1.62937300731002,1.83843757322004,2.20231761998777,2.042997409363,1.84327839907492,2.63772575460388,4.29991924931325,2.08365348222704,2.23346399201105,2.8138130501584,1.83357897332172,2.94628585473668,2.56269025438385,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.702222100658759,0.170430322578058,0,0,0.563373679106722,0,0,0,1.73192832808971,1.52015919285059,2.02209778005913,0.45673551887624,0.776813650941515,0.148442139064825,0.867426633830679,0.608930956624282,0,0.753613202763113,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0.484875253135222,1.86391761218122,2.34224637609238,2.09446706813455,1.53274233125155,2.39630249011841,1.19980546198682,2.1601938602421,2.24685959107234,1.37250180845588,1.63350657746724,1.39059456153821,1.53429274398198,1.24672826735736,2.43361894601636,0.305518091550949,0.248813941220186,0.252722758433675,0.631325567659422,1.04096354370163,0.689706313300419,1.0803727788321,1.20563854268572,1.08858398642125,1.66547836370305,0.749613796477831,1.81092359517311,1.07783996466421,0.756424320671277,0.879755620819744,0.876782929710299,1.66828349535359,1.39300866608867,0.205782136407943,0.398068533636986,1.40442637462647,2.05878325691772,3.9782889915383,1.03562886267751,0.938104239924385,0.180062061461015,0.473489471170421,0.787056926989615,0.154267112887378,0.465067889500816,0.536546802799238,0,0.329119699826961,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0.630869845692382,0.514523061896422,1.98251269790279,1.05780226665418,0.426576501070468,0.464473343720877,0.257734922644187,1.21010114774006,1.11189021922435,0.760902504450237,0.474529061544512,1.31759163779209,0.502670417600539,1.39269530428806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| ||
|EntrezGene=107895 | |||
|HGNC= | |||
|UniProt=Q8R4G6,Q059T5 | |||
|association_with_transcript=313bp_to_ENSMUST00000038361,NM_145128,uc007ckp.1,uc007ckq.1,uc007ckr.1_5end | |||
|description=CAGE_peak_4_at_Mgat5_5end | |||
|id=chr1:129101876..129101896,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.25e-10!23;CL:0000337!6.25e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.62e-11,23;CL:0000337,4.62e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.19e-17!94;UBERON:0007811!8.53e-17!86;UBERON:0001049!9.13e-14!52;UBERON:0005068!9.13e-14!52;UBERON:0006241!9.13e-14!52;UBERON:0007135!9.13e-14!52;UBERON:0000955!2.29e-13!50;UBERON:0006238!2.29e-13!50;UBERON:0002616!6.34e-13!49;UBERON:0000064!1.32e-12!99;UBERON:0000033!2.51e-12!63;UBERON:0001017!1.84e-11!73;UBERON:0005743!1.84e-11!73;UBERON:0003056!3.40e-11!49;UBERON:0002346!9.23e-11!71;UBERON:0003075!9.23e-11!71;UBERON:0007284!9.23e-11!71;UBERON:0000073!1.68e-10!75;UBERON:0001016!1.68e-10!75;UBERON:0003080!3.21e-10!40;UBERON:0002780!9.80e-10!39;UBERON:0001890!9.80e-10!39;UBERON:0006240!9.80e-10!39;UBERON:0002020!3.22e-09!34;UBERON:0004121!3.15e-08!102;UBERON:0000924!3.15e-08!102;UBERON:0006601!3.15e-08!102;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0000063!2.64e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.48e-15,54;UBERON:0001049,1.97e-13,52;UBERON:0005068,1.97e-13,52;UBERON:0006241,1.97e-13,52;UBERON:0007135,1.97e-13,52;UBERON:0002346,1.89e-12,64;UBERON:0003075,1.89e-12,64;UBERON:0007284,1.89e-12,64;UBERON:0000955,1.01e-11,47;UBERON:0006238,1.01e-11,47;UBERON:0001017,1.27e-11,73;UBERON:0002616,3.49e-11,46;UBERON:0010371,5.30e-11,73;UBERON:0001016,6.62e-11,75;UBERON:0004121,5.26e-10,95;UBERON:0000924,5.26e-10,95;UBERON:0006601,5.26e-10,95;UBERON:0003056,2.18e-09,49;UBERON:0003080,5.32e-09,40;UBERON:0002780,2.01e-08,39;UBERON:0001890,2.01e-08,39;UBERON:0006240,2.01e-08,39;UBERON:0000072,5.43e-08,27;UBERON:0011216,6.99e-08,194;UBERON:0002020,7.32e-08,34;UBERON:0002370,3.89e-07,23;UBERON:0000974,3.89e-07,23;UBERON:0004807,3.89e-07,23;UBERON:0005058,3.89e-07,23;UBERON:0003351,3.89e-07,23;UBERON:0009113,3.89e-07,23;UBERON:0003295,3.89e-07,23;UBERON:0009722,3.89e-07,23;UBERON:0005562,3.89e-07,23;UBERON:0007690,3.89e-07,23 | |||
|phase1_expression=0,1.39590163055744,0,1.51232105653415,0.500895729946347,1.00727563147134,0.934450562382103,2.84071311571468,1.267098499365,1.63845168425395,1.71217968225505,1.19658238493005,0.171200729931206,1.04904482902797,0,0,0,0.473193248037357,0.822686601634433,0,0.255129870453209,1.19149141441062,0.261199789138935,1.11994695955385,0.91763712426868,0,0,1.50829862880122,1.33016393619462,1.00812051903972,0.665191531965914,0,0,0,1.44425809875637,1.49611180822643,2.24586291888606,0,0,0.523523743973798,0,0.683045484958446,0,1.00717454380462,1.11514624341466,1.46837401729345,0,1.09012578190223,0.878744730937887,0.777719596297134,0.699932108126813,0,0.335565212115473,2.17608642603403,1.34437519656986,0.514518872071894,0.286533439938757,0,2.02316460859598,2.11596391708813,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,1.76272340924412,0.675029691658453,1.68259969081106,0.856952953211411,1.54607978666129,0.979926393719632,1.62937300731002,1.83843757322004,2.20231761998777,2.042997409363,1.84327839907492,2.63772575460388,4.29991924931325,2.08365348222704,2.23346399201105,2.8138130501584,1.83357897332172,2.94628585473668,2.56269025438385,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.702222100658759,0.170430322578058,0,0,0.563373679106722,0,0,0,1.73192832808971,1.52015919285059,2.02209778005913,0.45673551887624,0.776813650941515,0.148442139064825,0.867426633830679,0.608930956624282,0,0.753613202763113,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0.484875253135222,1.86391761218122,2.34224637609238,2.09446706813455,1.53274233125155,2.39630249011841,1.19980546198682,2.1601938602421,2.24685959107234,1.37250180845588,1.63350657746724,1.39059456153821,1.53429274398198,1.24672826735736,2.43361894601636,0.305518091550949,0.248813941220186,0.252722758433675,0.631325567659422,1.04096354370163,0.689706313300419,1.0803727788321,1.20563854268572,1.08858398642125,1.66547836370305,0.749613796477831,1.81092359517311,1.07783996466421,0.756424320671277,0.879755620819744,0.876782929710299,1.66828349535359,1.39300866608867,0.205782136407943,0.398068533636986,1.40442637462647,2.05878325691772,3.9782889915383,1.03562886267751,0.938104239924385,0.180062061461015,0.473489471170421,0.787056926989615,0.154267112887378,0.465067889500816,0.536546802799238,0,0.329119699826961,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0.630869845692382,0.514523061896422,1.98251269790279,1.05780226665418,0.426576501070468,0.464473343720877,0.257734922644187,1.21010114774006,1.11189021922435,0.760902504450237,0.474529061544512,1.31759163779209,0.502670417600539,1.39269530428806,1.75467678407208,0.898819408654221,1.29682829924817,1.39398891278057,0.379335801906163,1.02823661348756,1.1270773567308,0.610953983535943,1.16371492300575,0.701358198903186,0.316182685621286,0.295220295959204,0.627994911365499,0.616985819609003,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0.624075346229121,0,0,0,0.739012760666419,0.37898282354097,0.325929952884052,0.848725428875941,0.234690248288502,0.502518772325447,0.714130922658041,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0.690739927463582,0.867894351489069,0,1.08781136763742,0,0,2.88991061978026,2.34423373184406,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,1.16902343164525,0,1.92792789853084,0.99358059645788,0.534196811001766,0.162886959353576,0.989820737835213,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,3.06395645178409,1.62054984628179,0.517434735131018,1.07168517515796,1.41872186913819,1.24858172321449,1.81003922662333,0.913394847343798,0.704015124191131,0.63549621259146,0,0.49465875882444,0.322928853391811,0.72375509913787,2.626191568069,2.9545361954111,1.45740418314925,1.48340241608408,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,3.22959016988325,3.21888340344413,4.28419918793714,0,0,0.406638934253697,0.648032044930808,0,0.655087691238533,0.404593039154462,0.247960367176008,0,0.90730481304255,0,0,0.598066184175915,0.66183396182839,0,0,0.675824501963113,0.117357238645754,0.2604087696879,0.734015410979976,0,0,1.89606672376907,1.01362607645082,1.1298205288131,0.649604114888975,1.9692936523423,1.98681354781265,2.76449533895928,2.80610101631697,2.52416124870369,2.362411006305,2.72230699869469,1.55932609183604,3.36741445741153,3.62318396762864,0.453460767230423,0.665957860122194,1.52513556236109,0.335769232728157,0.965947970160952,0.187682475451182,0.73260649706906,0.428736758158132,0,0,0.920650473014354,2.86447756719698,1.89038500578056,0.685082519770642,0.755393897389701,1.35004500046361,3.15224842256954,2.71885445390523,2.5888015587591,0.31136204275253,1.19707462020309,2.04880326904961,0.486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| |||
|short_description=p4@Mgat5 | |||
}} | |||
Revision as of 18:41, 13 September 2013
| Short description: | p4@Mgat5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Mgat5_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 313bp_to_ENSMUST00000038361, NM_145128, uc007ckp.1, uc007ckq.1, uc007ckr.1_5end |
| EntrezGene: | Mgat5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 4.62e-11 | 23 |
| neuroblast (sensu Vertebrata) | 4.62e-11 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
