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FFCP PHASE1:Mm9::chr3:88259614..88259629,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20351|HGNC=|MCL_coexpression_id=3|UniProt=D3YWV5|association_with_transcript=0bp_to_ENSMUST00000107531_5end|description=CAGE_peak_2_at_Sema4a_5end|id=chr3:88259614..88259629,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!9.28e-15!128;UBERON:0001555!9.28e-15!128;UBERON:0007026!9.28e-15!128;UBERON:0004119!4.57e-14!130;UBERON:0000925!4.57e-14!130;UBERON:0006595!4.57e-14!130;UBERON:0004921!5.91e-14!126;UBERON:0004185!5.91e-14!126;UBERON:0005409!1.32e-10!59;UBERON:0000160!3.51e-07!43;UBERON:0003102!3.69e-07!23;UBERON:0003104!5.19e-07!131;UBERON:0009142!5.19e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.55e-13,47;UBERON:0001007,5.80e-13,116;UBERON:0001555,5.80e-13,116;UBERON:0007026,5.80e-13,116;UBERON:0004119,3.22e-12,118;UBERON:0000925,3.22e-12,118;UBERON:0006595,3.22e-12,118;UBERON:0004921,3.69e-12,114;UBERON:0000160,1.13e-09,31;UBERON:0003102,5.69e-07,22;UBERON:0000344,8.02e-07,15|phase1_expression=0,14.6569671208532,13.6499771816861,6.65421264875026,11.520601788766,5.20425742926858,6.07392865548367,0.387369970324729,0.140788722151667,0.936258105287974,0,0.0797721589953364,0.856003649656029,0.874204024189974,0.999329285446988,1.21485160433896,0.699561878128147,0.157731082679119,0.411343300817216,0.84877930359606,5.10259740906419,0,0,10.7194923271582,13.9939661450974,13.7815671387605,9.04600191934057,11.2045040996662,18.6222951067246,16.3819584343955,10.8647950221099,0,0,0,5.19932915552294,5.15327400611326,6.53341940039581,191.268955246767,96.8855827209512,141.351410872926,191.17523361008,159.832643480276,181.580872033651,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0.771778308107841,0.286533439938757,7.21940929188419,0,0.528990979272033,0,0,0,2.2497492932035,1.97773272513395,2.8419204597844,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,3.47837386442013,11.185510400758,22.4390540123558,30.7630819233556,45.4843492213368,30.0178014355215,11.7973312910672,0,0,0,0,0,0,0,1.5154372870785,0.760079596425296,1.51657333504435,15.7573754012303,2.58937883647172,0.593768556259299,0,0,0.230615497256059,0,0.705532242814229,1.88499886994513,4.94389935468748,1.73519228303894,25.6537060065464,1.94120219936891,3.3126227769059,4.363877278217,18.6391761218122,0,0,14.3055950916811,0.359445373517761,1.19980546198682,0.381210681219194,0,0,0,0.521472960576829,0,0,0,0.81471491080253,20.6515571212754,76.5749958054034,5.05060454127538,0,0.919608417733892,0.900310649026746,2.56198190320716,0.884474488967262,1.15302348256365,1.12442069471675,2.06962696591213,0.431135985865684,0.378212160335639,0.527853372491847,2.19195732427575,14.7365042089567,20.1986256582857,24.2822920961373,0.398068533636986,1.40442637462647,2.05878325691772,5.39910648851626,0,0.469052119962192,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0.536825675041487,0,0,17.8426142811251,10.8424732332053,0,0.232236671860439,1.28867461322093,4.03367049246685,6.22658522765637,10.2721838100782,10.9141684155238,12.8465184684728,9.80207314321051,8.95304124185179,9.94316844307513,9.88701349519644,8.86166004486246,12.7450414882795,0.379335801906163,1.02823661348756,1.1270773567308,2.24016460629846,2.32742984601151,2.59502533594179,3.28829993046138,7.52811754695971,8.32093257559286,11.8461277364928,45.3572519443338,0.166845105716094,0.196558995113203,0.449724224769707,1.01430060694251,1.92941727801933,1.52775511068852,5.17853047411459,4.05338066937588,4.94210543738547,4.31304619582064,7.81495990103857,8.7370548472077,19.7011524798747,14.5311904952749,41.9725863586129,8.68339993783042,0,0.162964976442026,0.339490171550376,0.938760993154008,1.50755631697634,3.57065461329021,4.87834119644497,1.89162172927429,5.3151525515706,4.30527875375215,10.3233888270915,10.3610989119537,10.5593812764503,1.50791283939272,5.4390568381871,2.95058563811422,5.51873492609465,0,0,0,1.00988370881749,0.315508219416257,0,0,0,0,0,0,0,0,0,4.82596289708113,0.890328018336276,1.30309567482861,7.09371528781903,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,2.06711325016541,0.922305443831782,3.87642439752332,1.81766864738753,0.356497378384721,2.21225730555071,3.16255825724996,1.03135543248187,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0.42366414172764,101.443063105282,34.4612268647693,26.1572371247367,22.7982856228429,30.2012030327935,36.6034206431487,8.74442509889552,0.18542530201051,6.4930934703184,2.47664241555867,6.11141940320049,3.95573759709851,1.36694227721025,0.686334519619568,0.339956859987711,1.39951452323658,0.967399816630967,17.184071124272,0,6.70954241518601,11.6645768087545,21.7451827855047,20.7444435558869,21.7131597679561,17.4398791580459,17.0141362289619,18.2757112341428,13.6694648879124,0,0.448549638131936,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.58678619322877,0.651021924219751,0,0,0,2.21207784439725,1.82452693761148,1.33524244314275,0.389762468933385,0.716106782669926,0.993406773906324,0.841368146639782,0.590758108698309,0.908698049533329,0.609654453239999,0.302478555410522,1.55932609183604,0.577271049841977,1.16876902181569,32.19571447336,0,0,0,42.8880898751463,86.5216211829949,31.6852309982369,49.0903588091061,57.6807919640668,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.512200817262403,7.05009479498053,1.25767897576789,1.65459157605013,3.55594764482584,3.5025959730612,3.53011130550997,2.52697211763797,3.29523089857312,3.39527414494937,2.62196220915671,2.43295579138503,2.69946704091382,3.81034953026459,1.85414921511769,1.92909220463705,1.23625770240992,3.38557516309114,2.74295401908332,4.08194354166476,1.66905332963125,2.90692833264657,3.85848459702856,3.80765735512544,2.19513567447327,4.20911538300549,2.44447404922551,2.24456908663095,1.77952527186261,2.65962102414021,1.63692417267876,1.85924209423159,11.5743966588685,9.49280196164194,7.01794825336225,9.23945532407683,2.48674831689496,9.04424818390014,3.47801753430632|short_description=p2@Sema4a}}
|EntrezGene=20351
|HGNC=
|MCL_coexpression_id=3
|UniProt=D3YWV5
|association_with_transcript=0bp_to_ENSMUST00000107531_5end
|description=CAGE_peak_2_at_Sema4a_5end
|id=chr3:88259614..88259629,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!9.28e-15!128;UBERON:0001555!9.28e-15!128;UBERON:0007026!9.28e-15!128;UBERON:0004119!4.57e-14!130;UBERON:0000925!4.57e-14!130;UBERON:0006595!4.57e-14!130;UBERON:0004921!5.91e-14!126;UBERON:0004185!5.91e-14!126;UBERON:0005409!1.32e-10!59;UBERON:0000160!3.51e-07!43;UBERON:0003102!3.69e-07!23;UBERON:0003104!5.19e-07!131;UBERON:0009142!5.19e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.55e-13,47;UBERON:0001007,5.80e-13,116;UBERON:0001555,5.80e-13,116;UBERON:0007026,5.80e-13,116;UBERON:0004119,3.22e-12,118;UBERON:0000925,3.22e-12,118;UBERON:0006595,3.22e-12,118;UBERON:0004921,3.69e-12,114;UBERON:0000160,1.13e-09,31;UBERON:0003102,5.69e-07,22;UBERON:0000344,8.02e-07,15
|phase1_expression=0,14.6569671208532,13.6499771816861,6.65421264875026,11.520601788766,5.20425742926858,6.07392865548367,0.387369970324729,0.140788722151667,0.936258105287974,0,0.0797721589953364,0.856003649656029,0.874204024189974,0.999329285446988,1.21485160433896,0.699561878128147,0.157731082679119,0.411343300817216,0.84877930359606,5.10259740906419,0,0,10.7194923271582,13.9939661450974,13.7815671387605,9.04600191934057,11.2045040996662,18.6222951067246,16.3819584343955,10.8647950221099,0,0,0,5.19932915552294,5.15327400611326,6.53341940039581,191.268955246767,96.8855827209512,141.351410872926,191.17523361008,159.832643480276,181.580872033651,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0.771778308107841,0.286533439938757,7.21940929188419,0,0.528990979272033,0,0,0,2.2497492932035,1.97773272513395,2.8419204597844,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,3.47837386442013,11.185510400758,22.4390540123558,30.7630819233556,45.4843492213368,30.0178014355215,11.7973312910672,0,0,0,0,0,0,0,1.5154372870785,0.760079596425296,1.51657333504435,15.7573754012303,2.58937883647172,0.593768556259299,0,0,0.230615497256059,0,0.705532242814229,1.88499886994513,4.94389935468748,1.73519228303894,25.6537060065464,1.94120219936891,3.3126227769059,4.363877278217,18.6391761218122,0,0,14.3055950916811,0.359445373517761,1.19980546198682,0.381210681219194,0,0,0,0.521472960576829,0,0,0,0.81471491080253,20.6515571212754,76.5749958054034,5.05060454127538,0,0.919608417733892,0.900310649026746,2.56198190320716,0.884474488967262,1.15302348256365,1.12442069471675,2.06962696591213,0.431135985865684,0.378212160335639,0.527853372491847,2.19195732427575,14.7365042089567,20.1986256582857,24.2822920961373,0.398068533636986,1.40442637462647,2.05878325691772,5.39910648851626,0,0.469052119962192,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0.536825675041487,0,0,17.8426142811251,10.8424732332053,0,0.232236671860439,1.28867461322093,4.03367049246685,6.22658522765637,10.2721838100782,10.9141684155238,12.8465184684728,9.80207314321051,8.95304124185179,9.94316844307513,9.88701349519644,8.86166004486246,12.7450414882795,0.379335801906163,1.02823661348756,1.1270773567308,2.24016460629846,2.32742984601151,2.59502533594179,3.28829993046138,7.52811754695971,8.32093257559286,11.8461277364928,45.3572519443338,0.166845105716094,0.196558995113203,0.449724224769707,1.01430060694251,1.92941727801933,1.52775511068852,5.17853047411459,4.05338066937588,4.94210543738547,4.31304619582064,7.81495990103857,8.7370548472077,19.7011524798747,14.5311904952749,41.9725863586129,8.68339993783042,0,0.162964976442026,0.339490171550376,0.938760993154008,1.50755631697634,3.57065461329021,4.87834119644497,1.89162172927429,5.3151525515706,4.30527875375215,10.3233888270915,10.3610989119537,10.5593812764503,1.50791283939272,5.4390568381871,2.95058563811422,5.51873492609465,0,0,0,1.00988370881749,0.315508219416257,0,0,0,0,0,0,0,0,0,4.82596289708113,0.890328018336276,1.30309567482861,7.09371528781903,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,2.06711325016541,0.922305443831782,3.87642439752332,1.81766864738753,0.356497378384721,2.21225730555071,3.16255825724996,1.03135543248187,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0.42366414172764,101.443063105282,34.4612268647693,26.1572371247367,22.7982856228429,30.2012030327935,36.6034206431487,8.74442509889552,0.18542530201051,6.4930934703184,2.47664241555867,6.11141940320049,3.95573759709851,1.36694227721025,0.686334519619568,0.339956859987711,1.39951452323658,0.967399816630967,17.184071124272,0,6.70954241518601,11.6645768087545,21.7451827855047,20.7444435558869,21.7131597679561,17.4398791580459,17.0141362289619,18.2757112341428,13.6694648879124,0,0.448549638131936,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.58678619322877,0.651021924219751,0,0,0,2.21207784439725,1.82452693761148,1.33524244314275,0.389762468933385,0.716106782669926,0.993406773906324,0.841368146639782,0.590758108698309,0.908698049533329,0.609654453239999,0.302478555410522,1.55932609183604,0.577271049841977,1.16876902181569,32.19571447336,0,0,0,42.8880898751463,86.5216211829949,31.6852309982369,49.0903588091061,57.6807919640668,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.512200817262403,7.05009479498053,1.25767897576789,1.65459157605013,3.55594764482584,3.5025959730612,3.53011130550997,2.52697211763797,3.29523089857312,3.39527414494937,2.62196220915671,2.43295579138503,2.69946704091382,3.81034953026459,1.85414921511769,1.92909220463705,1.23625770240992,3.38557516309114,2.74295401908332,4.08194354166476,1.66905332963125,2.90692833264657,3.85848459702856,3.80765735512544,2.19513567447327,4.20911538300549,2.44447404922551,2.24456908663095,1.77952527186261,2.65962102414021,1.63692417267876,1.85924209423159,11.5743966588685,9.49280196164194,7.01794825336225,9.23945532407683,2.48674831689496,9.04424818390014,3.47801753430632
|short_description=p2@Sema4a
}}

Revision as of 02:46, 14 September 2013

Short description:p2@Sema4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sema4a_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000107531_5end
EntrezGene:Sema4a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Sema4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.99
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I211.20
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C116.38
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8191.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H196.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3141.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9191.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2159.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4181.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C422.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.76
Mouse hepatocyte, donor6.CNhs13090.11822-124F445.48
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.02
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.65
epididymis, adult.CNhs10490.58-23B276.57
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E714.74
forelimb, embryo E17.CNhs10598.1517-43C420.20
forelimb, embryo E18.CNhs11008.1520-43B524.28
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I317.84
intestine, adult.CNhs10496.178-9A310.84
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A59.94
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E38.86
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I17.53
kidney, neonate N25.CNhs11122.1353-25F38.32
kidney, neonate N30.CNhs11203.1385-42H111.85
liver, adult pregnant day01.CNhs10466.508-5B245.36
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A319.70
liver, neonate N25.CNhs11198.1368-26H114.53
liver, neonate N30.CNhs11106.1382-42D141.97
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A410.32
lung, neonate N25.CNhs11119.1359-25C710.36
lung, neonate N30.CNhs11133.1394-42H210.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F8101.44
skin, adult.CNhs10492.30-1C334.46
skin, neonate N00.CNhs11124.650-25G426.16
skin, neonate N03.CNhs11215.662-22H322.80
skin, neonate N06.CNhs11097.693-20I530.20
skin, neonate N10.CNhs11108.762-6C436.60
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D411.66
stomach, embryo E17.CNhs11006.1035-18D521.75
stomach, embryo E18.CNhs10999.1286-20C620.74
stomach, neonate N03.CNhs11193.1340-24B821.71
stomach, neonate N07.CNhs11210.718-18A917.44
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I118.28
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B432.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E442.89
uterus, adult pregnant day19.CNhs10497.590-15F586.52
uterus, adult.CNhs10509.92-27E531.69
vagina, adult.CNhs10502.89-27D549.09
vesicular gland, adult.CNhs10491.51-27F857.68
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D19.04
whole body, neonate N10.CNhs10518.761-6B43.48





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system2.55e-1347
digestive system5.80e-13116
digestive tract5.80e-13116
primitive gut5.80e-13116
endoderm-derived structure3.22e-12118
endoderm3.22e-12118
presumptive endoderm3.22e-12118
subdivision of digestive tract3.69e-12114
intestine1.13e-0931
surface structure5.69e-0722
mucosa8.02e-0715







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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