FFCP PHASE1:Mm9::chr19:7876675..7876690,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=196|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:7876675..7876690,-|id=chr19:7876675..7876690,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.42e-25!22;UBERON:0007499!2.42e-25!22;UBERON:0006925!2.42e-25!22;UBERON:0009497!2.42e-25!22;UBERON:0000015!2.42e-25!22;UBERON:0002423!2.42e-25!22;UBERON:0006235!2.42e-25!22;UBERON:0008835!2.42e-25!22;UBERON:0003894!2.42e-25!22;UBERON:0004161!2.42e-25!22;UBERON:0008836!2.42e-25!22;UBERON:0009854!3.13e-24!23;UBERON:0009856!3.13e-24!23;UBERON:0002365!2.84e-22!25;UBERON:0002330!2.84e-22!25;UBERON:0003914!1.08e-11!47;UBERON:0005256!1.08e-11!47;UBERON:0005172!3.37e-11!49;UBERON:0005173!3.37e-11!49;UBERON:0002417!3.37e-11!49;UBERON:0000916!3.37e-11!49;UBERON:0005057!9.63e-11!51;UBERON:0003929!6.26e-10!55;UBERON:0002368!4.60e-09!60;UBERON:0002530!2.49e-08!65;UBERON:0000490!3.39e-08!66;UBERON:0009569!3.39e-08!66;UBERON:0005911!8.10e-08!69;UBERON:0002405!1.07e-07!70;UBERON:0000949!1.80e-07!72;UBERON:0000466!9.24e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.00e-20,22;UBERON:0007499,1.00e-20,22;UBERON:0006925,1.00e-20,22;UBERON:0009497,1.00e-20,22;UBERON:0000015,1.00e-20,22;UBERON:0002423,1.00e-20,22;UBERON:0006235,1.00e-20,22;UBERON:0008835,1.00e-20,22;UBERON:0003894,1.00e-20,22;UBERON:0004161,1.00e-20,22;UBERON:0008836,1.00e-20,22;UBERON:0009854,7.69e-20,23;UBERON:0009856,7.69e-20,23;UBERON:0002365,2.79e-18,25;UBERON:0002330,2.79e-18,25;UBERON:0005256,2.89e-10,45;UBERON:0003914,7.77e-10,47;UBERON:0005172,1.93e-09,49;UBERON:0005173,1.93e-09,49;UBERON:0002417,1.93e-09,49;UBERON:0000916,1.93e-09,49;UBERON:0003929,1.99e-08,55;UBERON:0002368,9.83e-08,60;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0002530,3.81e-07,65;UBERON:0000490,4.87e-07,66;UBERON:0009569,4.87e-07,66;UBERON:0005911,9.79e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.4197575398848,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,2.02063102357689,1.61457672169721,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:7876675..7876690,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=196 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:7876675..7876690,- | |||
|id=chr19:7876675..7876690,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.42e-25!22;UBERON:0007499!2.42e-25!22;UBERON:0006925!2.42e-25!22;UBERON:0009497!2.42e-25!22;UBERON:0000015!2.42e-25!22;UBERON:0002423!2.42e-25!22;UBERON:0006235!2.42e-25!22;UBERON:0008835!2.42e-25!22;UBERON:0003894!2.42e-25!22;UBERON:0004161!2.42e-25!22;UBERON:0008836!2.42e-25!22;UBERON:0009854!3.13e-24!23;UBERON:0009856!3.13e-24!23;UBERON:0002365!2.84e-22!25;UBERON:0002330!2.84e-22!25;UBERON:0003914!1.08e-11!47;UBERON:0005256!1.08e-11!47;UBERON:0005172!3.37e-11!49;UBERON:0005173!3.37e-11!49;UBERON:0002417!3.37e-11!49;UBERON:0000916!3.37e-11!49;UBERON:0005057!9.63e-11!51;UBERON:0003929!6.26e-10!55;UBERON:0002368!4.60e-09!60;UBERON:0002530!2.49e-08!65;UBERON:0000490!3.39e-08!66;UBERON:0009569!3.39e-08!66;UBERON:0005911!8.10e-08!69;UBERON:0002405!1.07e-07!70;UBERON:0000949!1.80e-07!72;UBERON:0000466!9.24e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.00e-20,22;UBERON:0007499,1.00e-20,22;UBERON:0006925,1.00e-20,22;UBERON:0009497,1.00e-20,22;UBERON:0000015,1.00e-20,22;UBERON:0002423,1.00e-20,22;UBERON:0006235,1.00e-20,22;UBERON:0008835,1.00e-20,22;UBERON:0003894,1.00e-20,22;UBERON:0004161,1.00e-20,22;UBERON:0008836,1.00e-20,22;UBERON:0009854,7.69e-20,23;UBERON:0009856,7.69e-20,23;UBERON:0002365,2.79e-18,25;UBERON:0002330,2.79e-18,25;UBERON:0005256,2.89e-10,45;UBERON:0003914,7.77e-10,47;UBERON:0005172,1.93e-09,49;UBERON:0005173,1.93e-09,49;UBERON:0002417,1.93e-09,49;UBERON:0000916,1.93e-09,49;UBERON:0003929,1.99e-08,55;UBERON:0002368,9.83e-08,60;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0002530,3.81e-07,65;UBERON:0000490,4.87e-07,66;UBERON:0009569,4.87e-07,66;UBERON:0005911,9.79e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.4197575398848,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,2.02063102357689,1.61457672169721,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:7876675..7876690,- | |||
}} |
Revision as of 18:26, 13 September 2013
Short description: | p@chr19:7876675..7876690, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7876675..7876690, - |
Coexpression cluster: | MCL_coexpression_mm9:196 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.00e-20 | 22 |
epithelial sac | 1.00e-20 | 22 |
digestive gland | 1.00e-20 | 22 |
epithelium of foregut-midgut junction | 1.00e-20 | 22 |
anatomical boundary | 1.00e-20 | 22 |
hepatobiliary system | 1.00e-20 | 22 |
foregut-midgut junction | 1.00e-20 | 22 |
hepatic diverticulum | 1.00e-20 | 22 |
liver primordium | 1.00e-20 | 22 |
septum transversum | 1.00e-20 | 22 |
liver bud | 1.00e-20 | 22 |
digestive tract diverticulum | 7.69e-20 | 23 |
sac | 7.69e-20 | 23 |
exocrine gland | 2.79e-18 | 25 |
exocrine system | 2.79e-18 | 25 |
trunk mesenchyme | 2.89e-10 | 45 |
epithelial tube | 7.77e-10 | 47 |
abdomen element | 1.93e-09 | 49 |
abdominal segment element | 1.93e-09 | 49 |
abdominal segment of trunk | 1.93e-09 | 49 |
abdomen | 1.93e-09 | 49 |
gut epithelium | 1.99e-08 | 55 |
endocrine gland | 9.83e-08 | 60 |
mesenchyme | 1.31e-07 | 61 |
entire embryonic mesenchyme | 1.31e-07 | 61 |
gland | 3.81e-07 | 65 |
unilaminar epithelium | 4.87e-07 | 66 |
subdivision of trunk | 4.87e-07 | 66 |
endo-epithelium | 9.79e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.