FFCP PHASE1:Mm9::chr10:108447746..108447779,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20979|HGNC=|MCL_coexpression_id=2|UniProt=P46096|association_with_transcript=-71bp_to_uc007gzg.1,uc007gzh.1,uc007gzi.1_5end|description=CAGE_peak_5_at_Syt1_5end|id=chr10:108447746..108447779,-|ontology_enrichment_celltype=CL:0000540!8.56e-16!33;CL:0000047!8.56e-16!33;CL:0000031!8.56e-16!33;CL:0000404!8.56e-16!33;CL:0000393!3.07e-11!39;CL:0000211!3.07e-11!39;CL:0000117!5.70e-11!23;CL:0000337!5.70e-11!23;CL:0000221!2.33e-10!44;CL:0000133!2.33e-10!44;CL:0002319!2.89e-10!43;CL:0000055!4.31e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-18,33;CL:0000047,1.84e-18,33;CL:0000031,1.84e-18,33;CL:0000404,1.84e-18,33;CL:0000393,1.60e-14,39;CL:0000211,1.60e-14,39;CL:0000117,9.34e-13,23;CL:0000337,9.34e-13,23;CL:0002319,1.60e-12,43;CL:0000221,4.40e-12,44;CL:0000133,4.40e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.58e-30!71;UBERON:0003075!6.58e-30!71;UBERON:0007284!6.58e-30!71;UBERON:0000073!8.38e-30!75;UBERON:0001016!8.38e-30!75;UBERON:0001017!1.39e-29!73;UBERON:0005743!1.39e-29!73;UBERON:0004121!4.24e-29!102;UBERON:0000924!4.24e-29!102;UBERON:0006601!4.24e-29!102;UBERON:0000033!8.33e-26!63;UBERON:0003056!1.14e-22!49;UBERON:0001049!1.71e-22!52;UBERON:0005068!1.71e-22!52;UBERON:0006241!1.71e-22!52;UBERON:0007135!1.71e-22!52;UBERON:0000955!8.29e-22!50;UBERON:0006238!8.29e-22!50;UBERON:0002616!4.95e-21!49;UBERON:0003080!8.11e-18!40;UBERON:0007811!8.43e-18!86;UBERON:0002780!3.63e-17!39;UBERON:0001890!3.63e-17!39;UBERON:0006240!3.63e-17!39;UBERON:0002020!1.06e-16!34;UBERON:0000153!1.16e-14!94;UBERON:0002791!1.10e-13!29;UBERON:0003528!1.10e-13!29;UBERON:0001893!1.10e-13!29;UBERON:0002021!1.51e-09!10;UBERON:0000411!1.51e-09!10;UBERON:0001950!1.51e-09!10;UBERON:0000956!4.37e-09!21;UBERON:0001869!4.37e-09!21;UBERON:0000203!4.37e-09!21;UBERON:0002619!6.06e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.03e-40,95;UBERON:0000924,8.03e-40,95;UBERON:0006601,8.03e-40,95;UBERON:0001017,8.13e-40,73;UBERON:0002346,2.91e-39,64;UBERON:0003075,2.91e-39,64;UBERON:0007284,2.91e-39,64;UBERON:0001016,2.29e-38,75;UBERON:0010371,2.48e-34,73;UBERON:0000073,7.05e-31,54;UBERON:0001049,5.47e-28,52;UBERON:0005068,5.47e-28,52;UBERON:0006241,5.47e-28,52;UBERON:0007135,5.47e-28,52;UBERON:0003056,2.16e-26,49;UBERON:0010314,2.23e-24,92;UBERON:0002020,1.23e-23,34;UBERON:0000955,4.43e-23,47;UBERON:0006238,4.43e-23,47;UBERON:0002616,7.10e-22,46;UBERON:0003080,5.01e-19,40;UBERON:0003528,2.05e-18,29;UBERON:0002791,2.05e-18,29;UBERON:0001893,2.05e-18,29;UBERON:0002780,5.31e-18,39;UBERON:0001890,5.31e-18,39;UBERON:0006240,5.31e-18,39;UBERON:0002021,5.03e-16,10;UBERON:0000411,5.03e-16,10;UBERON:0001950,5.03e-16,10;UBERON:0002619,7.73e-12,17;UBERON:0000956,1.23e-10,21;UBERON:0001869,1.23e-10,21;UBERON:0000203,1.23e-10,21;UBERON:0002420,1.15e-09,8;UBERON:0007245,1.15e-09,8;UBERON:0010009,1.15e-09,8;UBERON:0010011,1.15e-09,8;UBERON:0000454,1.15e-09,8;UBERON:0003076,1.42e-09,12;UBERON:0003057,1.42e-09,12;UBERON:0000970,2.30e-08,9;UBERON:0000019,2.30e-08,9;UBERON:0000047,2.30e-08,9;UBERON:0010312,2.30e-08,9;UBERON:0004088,2.30e-08,9;UBERON:0002104,2.30e-08,9;UBERON:0001456,2.30e-08,9;UBERON:0003072,2.30e-08,9;UBERON:0004128,2.30e-08,9;UBERON:0003071,2.30e-08,9;UBERON:0002240,1.60e-07,6;UBERON:0005174,1.60e-07,6;UBERON:0001137,1.60e-07,6;UBERON:0000020,2.37e-07,12;UBERON:0001032,2.37e-07,12;UBERON:0004456,2.37e-07,12;UBERON:0000025,3.85e-07,114;UBERON:0000483,9.53e-07,174|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.725827286159344,0.405017814995072,0.420649922702764,4.57041575046086,3.97563373712904,0.489963196859816,0.958454710182364,0,20.9220173898839,17.7485399938411,14.7462271925994,4.2203612073662,2.47016637726506,1.56274011167028,5.862842979029,8.4414391504752,9.62628960993904,5.30331453852602,6.83384067835694,3.16879057903011,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.587943535678524,0,0,0.144599356919912,0,0,0,0,0,10.2473278954042,8.3778682725382,0,0,0,0,6.14141621559773,8.6925114535539,3.01570445070875,25.7259993884569,33.7544403676036,12.6750707181332,17.0353326221146,0.203678727700633,0,0,3.36706969418358,0.130120442962704,1.37941262660084,2.16074555766419,2.56198190320716,6.5995404176788,10.6334387836425,8.33945348581587,13.4525752784288,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,26.2862435705159,3.39585220851639,0,0.264450566663544,0.639864751605702,0.696710015581316,0,0.201683524623343,0,0,0,0.329397909448022,0,0.596869416123452,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0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| ||
|EntrezGene=20979 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P46096 | |||
|association_with_transcript=-71bp_to_uc007gzg.1,uc007gzh.1,uc007gzi.1_5end | |||
|description=CAGE_peak_5_at_Syt1_5end | |||
|id=chr10:108447746..108447779,- | |||
|ontology_enrichment_celltype=CL:0000540!8.56e-16!33;CL:0000047!8.56e-16!33;CL:0000031!8.56e-16!33;CL:0000404!8.56e-16!33;CL:0000393!3.07e-11!39;CL:0000211!3.07e-11!39;CL:0000117!5.70e-11!23;CL:0000337!5.70e-11!23;CL:0000221!2.33e-10!44;CL:0000133!2.33e-10!44;CL:0002319!2.89e-10!43;CL:0000055!4.31e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-18,33;CL:0000047,1.84e-18,33;CL:0000031,1.84e-18,33;CL:0000404,1.84e-18,33;CL:0000393,1.60e-14,39;CL:0000211,1.60e-14,39;CL:0000117,9.34e-13,23;CL:0000337,9.34e-13,23;CL:0002319,1.60e-12,43;CL:0000221,4.40e-12,44;CL:0000133,4.40e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.58e-30!71;UBERON:0003075!6.58e-30!71;UBERON:0007284!6.58e-30!71;UBERON:0000073!8.38e-30!75;UBERON:0001016!8.38e-30!75;UBERON:0001017!1.39e-29!73;UBERON:0005743!1.39e-29!73;UBERON:0004121!4.24e-29!102;UBERON:0000924!4.24e-29!102;UBERON:0006601!4.24e-29!102;UBERON:0000033!8.33e-26!63;UBERON:0003056!1.14e-22!49;UBERON:0001049!1.71e-22!52;UBERON:0005068!1.71e-22!52;UBERON:0006241!1.71e-22!52;UBERON:0007135!1.71e-22!52;UBERON:0000955!8.29e-22!50;UBERON:0006238!8.29e-22!50;UBERON:0002616!4.95e-21!49;UBERON:0003080!8.11e-18!40;UBERON:0007811!8.43e-18!86;UBERON:0002780!3.63e-17!39;UBERON:0001890!3.63e-17!39;UBERON:0006240!3.63e-17!39;UBERON:0002020!1.06e-16!34;UBERON:0000153!1.16e-14!94;UBERON:0002791!1.10e-13!29;UBERON:0003528!1.10e-13!29;UBERON:0001893!1.10e-13!29;UBERON:0002021!1.51e-09!10;UBERON:0000411!1.51e-09!10;UBERON:0001950!1.51e-09!10;UBERON:0000956!4.37e-09!21;UBERON:0001869!4.37e-09!21;UBERON:0000203!4.37e-09!21;UBERON:0002619!6.06e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.03e-40,95;UBERON:0000924,8.03e-40,95;UBERON:0006601,8.03e-40,95;UBERON:0001017,8.13e-40,73;UBERON:0002346,2.91e-39,64;UBERON:0003075,2.91e-39,64;UBERON:0007284,2.91e-39,64;UBERON:0001016,2.29e-38,75;UBERON:0010371,2.48e-34,73;UBERON:0000073,7.05e-31,54;UBERON:0001049,5.47e-28,52;UBERON:0005068,5.47e-28,52;UBERON:0006241,5.47e-28,52;UBERON:0007135,5.47e-28,52;UBERON:0003056,2.16e-26,49;UBERON:0010314,2.23e-24,92;UBERON:0002020,1.23e-23,34;UBERON:0000955,4.43e-23,47;UBERON:0006238,4.43e-23,47;UBERON:0002616,7.10e-22,46;UBERON:0003080,5.01e-19,40;UBERON:0003528,2.05e-18,29;UBERON:0002791,2.05e-18,29;UBERON:0001893,2.05e-18,29;UBERON:0002780,5.31e-18,39;UBERON:0001890,5.31e-18,39;UBERON:0006240,5.31e-18,39;UBERON:0002021,5.03e-16,10;UBERON:0000411,5.03e-16,10;UBERON:0001950,5.03e-16,10;UBERON:0002619,7.73e-12,17;UBERON:0000956,1.23e-10,21;UBERON:0001869,1.23e-10,21;UBERON:0000203,1.23e-10,21;UBERON:0002420,1.15e-09,8;UBERON:0007245,1.15e-09,8;UBERON:0010009,1.15e-09,8;UBERON:0010011,1.15e-09,8;UBERON:0000454,1.15e-09,8;UBERON:0003076,1.42e-09,12;UBERON:0003057,1.42e-09,12;UBERON:0000970,2.30e-08,9;UBERON:0000019,2.30e-08,9;UBERON:0000047,2.30e-08,9;UBERON:0010312,2.30e-08,9;UBERON:0004088,2.30e-08,9;UBERON:0002104,2.30e-08,9;UBERON:0001456,2.30e-08,9;UBERON:0003072,2.30e-08,9;UBERON:0004128,2.30e-08,9;UBERON:0003071,2.30e-08,9;UBERON:0002240,1.60e-07,6;UBERON:0005174,1.60e-07,6;UBERON:0001137,1.60e-07,6;UBERON:0000020,2.37e-07,12;UBERON:0001032,2.37e-07,12;UBERON:0004456,2.37e-07,12;UBERON:0000025,3.85e-07,114;UBERON:0000483,9.53e-07,174 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.725827286159344,0.405017814995072,0.420649922702764,4.57041575046086,3.97563373712904,0.489963196859816,0.958454710182364,0,20.9220173898839,17.7485399938411,14.7462271925994,4.2203612073662,2.47016637726506,1.56274011167028,5.862842979029,8.4414391504752,9.62628960993904,5.30331453852602,6.83384067835694,3.16879057903011,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.587943535678524,0,0,0.144599356919912,0,0,0,0,0,10.2473278954042,8.3778682725382,0,0,0,0,6.14141621559773,8.6925114535539,3.01570445070875,25.7259993884569,33.7544403676036,12.6750707181332,17.0353326221146,0.203678727700633,0,0,3.36706969418358,0.130120442962704,1.37941262660084,2.16074555766419,2.56198190320716,6.5995404176788,10.6334387836425,8.33945348581587,13.4525752784288,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,26.2862435705159,3.39585220851639,0,0.264450566663544,0.639864751605702,0.696710015581316,0,0.201683524623343,0,0,0,0.329397909448022,0,0.596869416123452,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,4.45404409050372,0,0,2.83957397474631,2.73307121007647,5.38558494331997,0.716906393857656,0.668396022247182,1.41538265394416,2.02405350837447,4.38383786866968,7.51046778098395,19.921921618152,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,4.42571487479924,0.540183282093931,0.129358683782755,0.428674070063185,0.532020700926821,0.713475270408282,1.64549020602121,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.216010681643603,0,0.436725127492355,0,0.41326727862668,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,1.75006069509643,0.645799117388655,1.35164900392623,0.469428954583016,0.5208175393758,0,0,0,0,0,0,0,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.288635524920988,0.350630706544707,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,32.1908550291728,33.6037422650239,31.5092532391668,30.4180132748327,30.8287133896789,48.3452094329408,31.0510350106631,45.4824415256463,33.5325382648311,30.5478583933574,0.103787347584177,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.735374033800057,0.44449345560323,0.412070114477788,0.962757628775446,1.01078884705519,0.50695859978048,0.754505365544305,1.03005658216871,0.512201219238954,0.804096565378586,0,0.927074607558844,0.192909220463705,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.238436189947321,1.30811774969096,1.03520318456864,0.930760686808441,0,0.789209134313529,0.950628796921032,0.561142271657738,1.06771516311757,0.886540341380071,1.22769312950907,0.77468420592983,0.771626443924566,0.499621155875892,0.701794825336225,1.07435527024149,0.382576664137687,0,0 | |||
|short_description=p5@Syt1 | |||
}} |
Revision as of 15:41, 12 September 2013
Short description: | p5@Syt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Syt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -71bp_to_uc007gzg.1, uc007gzh.1, uc007gzi.1_5end |
EntrezGene: | Syt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.84e-18 | 33 |
neuronal stem cell | 1.84e-18 | 33 |
neuroblast | 1.84e-18 | 33 |
electrically signaling cell | 1.84e-18 | 33 |
electrically responsive cell | 1.60e-14 | 39 |
electrically active cell | 1.60e-14 | 39 |
CNS neuron (sensu Vertebrata) | 9.34e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.34e-13 | 23 |
neural cell | 1.60e-12 | 43 |
ectodermal cell | 4.40e-12 | 44 |
neurectodermal cell | 4.40e-12 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.