FFCP PHASE1:Mm9::chr9:44318264..44318273,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=210|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:44318264..44318273,-|id=chr9:44318264..44318273,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,1.12e-15,9;CL:0000789,1.12e-15,9;CL:0002420,1.12e-15,9;CL:0002419,1.12e-15,9;CL:0000790,1.12e-15,9;CL:0000084,6.71e-13,11;CL:0000827,6.71e-13,11;CL:0000838,7.42e-12,12;CL:0000542,5.68e-11,13;CL:0000051,5.68e-11,13;CL:0000213,2.01e-10,1;CL:0002078,2.01e-10,1;CL:0000115,2.01e-10,1;CL:0002262,2.01e-10,1;CL:1000398,2.01e-10,1;CL:0000624,2.02e-10,8;CL:0000815,8.42e-10,1;CL:0000792,8.42e-10,1;CL:0000625,1.03e-09,1;CL:0000738,1.82e-08,17;CL:0002087,1.82e-08,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.08e-09!23;UBERON:0000974!1.08e-09!23;UBERON:0004807!1.08e-09!23;UBERON:0005058!1.08e-09!23;UBERON:0003351!1.08e-09!23;UBERON:0009113!1.08e-09!23;UBERON:0003295!1.08e-09!23;UBERON:0009722!1.08e-09!23;UBERON:0005562!1.08e-09!23;UBERON:0007690!1.08e-09!23;UBERON:0006562!3.85e-09!24;UBERON:0003408!3.85e-09!24;UBERON:0001557!3.85e-09!24;UBERON:0001042!3.85e-09!24;UBERON:0008814!3.85e-09!24;UBERON:0009145!3.85e-09!24;UBERON:0004177!4.29e-08!29;UBERON:0000072!9.65e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.01e-10,1;UBERON:0001281,2.01e-10,1;UBERON:0000353,2.01e-10,1;UBERON:0003497,2.01e-10,1;UBERON:0003909,2.01e-10,1;UBERON:0003928,2.01e-10,1;UBERON:0003835,2.01e-10,1;UBERON:0003513,2.01e-10,1;UBERON:0001280,2.01e-10,1;UBERON:0004647,2.01e-10,1;UBERON:0002294,2.01e-10,1;UBERON:0001173,2.01e-10,1;UBERON:0004912,2.01e-10,1;UBERON:0005171,2.01e-10,1|phase1_expression=0,0,0,0.60492842261366,0,0.33575854382378,0,1.03298658753261,0.84473233291,1.63845168425395,0,0,0,0.34968160967599,0,0.202475267389826,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,5.2175607966302,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0,0,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0,0,5.43930975980337,4.61839792668071,4.28419918793714,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0,0.201932899896295,0.381034033274999,0.100826185136841,0.38983152295901,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:44318264..44318273,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:44318264..44318273,- | |||
|id=chr9:44318264..44318273,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.12e-15,9;CL:0000789,1.12e-15,9;CL:0002420,1.12e-15,9;CL:0002419,1.12e-15,9;CL:0000790,1.12e-15,9;CL:0000084,6.71e-13,11;CL:0000827,6.71e-13,11;CL:0000838,7.42e-12,12;CL:0000542,5.68e-11,13;CL:0000051,5.68e-11,13;CL:0000213,2.01e-10,1;CL:0002078,2.01e-10,1;CL:0000115,2.01e-10,1;CL:0002262,2.01e-10,1;CL:1000398,2.01e-10,1;CL:0000624,2.02e-10,8;CL:0000815,8.42e-10,1;CL:0000792,8.42e-10,1;CL:0000625,1.03e-09,1;CL:0000738,1.82e-08,17;CL:0002087,1.82e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.08e-09!23;UBERON:0000974!1.08e-09!23;UBERON:0004807!1.08e-09!23;UBERON:0005058!1.08e-09!23;UBERON:0003351!1.08e-09!23;UBERON:0009113!1.08e-09!23;UBERON:0003295!1.08e-09!23;UBERON:0009722!1.08e-09!23;UBERON:0005562!1.08e-09!23;UBERON:0007690!1.08e-09!23;UBERON:0006562!3.85e-09!24;UBERON:0003408!3.85e-09!24;UBERON:0001557!3.85e-09!24;UBERON:0001042!3.85e-09!24;UBERON:0008814!3.85e-09!24;UBERON:0009145!3.85e-09!24;UBERON:0004177!4.29e-08!29;UBERON:0000072!9.65e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.01e-10,1;UBERON:0001281,2.01e-10,1;UBERON:0000353,2.01e-10,1;UBERON:0003497,2.01e-10,1;UBERON:0003909,2.01e-10,1;UBERON:0003928,2.01e-10,1;UBERON:0003835,2.01e-10,1;UBERON:0003513,2.01e-10,1;UBERON:0001280,2.01e-10,1;UBERON:0004647,2.01e-10,1;UBERON:0002294,2.01e-10,1;UBERON:0001173,2.01e-10,1;UBERON:0004912,2.01e-10,1;UBERON:0005171,2.01e-10,1 | |||
|phase1_expression=0,0,0,0.60492842261366,0,0.33575854382378,0,1.03298658753261,0.84473233291,1.63845168425395,0,0,0,0.34968160967599,0,0.202475267389826,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,5.2175607966302,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0,0,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0,0,5.43930975980337,4.61839792668071,4.28419918793714,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0,0.201932899896295,0.381034033274999,0.100826185136841,0.38983152295901,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:44318264..44318273,- | |||
}} |
Revision as of 17:56, 14 September 2013
Short description: | p@chr9:44318264..44318273, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44318264..44318273, - |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.12e-15 | 9 |
alpha-beta T cell | 1.12e-15 | 9 |
immature T cell | 1.12e-15 | 9 |
mature T cell | 1.12e-15 | 9 |
immature alpha-beta T cell | 1.12e-15 | 9 |
T cell | 6.71e-13 | 11 |
pro-T cell | 6.71e-13 | 11 |
lymphoid lineage restricted progenitor cell | 7.42e-12 | 12 |
lymphocyte | 5.68e-11 | 13 |
common lymphoid progenitor | 5.68e-11 | 13 |
lining cell | 2.01e-10 | 1 |
meso-epithelial cell | 2.01e-10 | 1 |
endothelial cell | 2.01e-10 | 1 |
endothelial cell of sinusoid | 2.01e-10 | 1 |
endothelial cell of hepatic sinusoid | 2.01e-10 | 1 |
CD4-positive, alpha-beta T cell | 2.02e-10 | 8 |
regulatory T cell | 8.42e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.42e-10 | 1 |
CD8-positive, alpha-beta T cell | 1.03e-09 | 1 |
leukocyte | 1.82e-08 | 17 |
nongranular leukocyte | 1.82e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.01e-10 | 1 |
hepatic sinusoid | 2.01e-10 | 1 |
parenchyma | 2.01e-10 | 1 |
abdomen blood vessel | 2.01e-10 | 1 |
sinusoid | 2.01e-10 | 1 |
digestive system duct | 2.01e-10 | 1 |
abdominal segment blood vessel | 2.01e-10 | 1 |
trunk blood vessel | 2.01e-10 | 1 |
liver parenchyma | 2.01e-10 | 1 |
liver lobule | 2.01e-10 | 1 |
biliary system | 2.01e-10 | 1 |
biliary tree | 2.01e-10 | 1 |
biliary bud | 2.01e-10 | 1 |
hepatic duct | 2.01e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.