FFCP PHASE1:Mm9::chr16:92052545..92052547,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=566|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:92052545..92052547,+|id=chr16:92052545..92052547,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004175!4.69e-20!9;UBERON:0001301!1.23e-15!3;UBERON:0006555!1.23e-15!3;UBERON:0005103!1.23e-15!3;UBERON:0000083!1.23e-15!3;UBERON:0009201!1.23e-15!3;UBERON:0004819!1.23e-15!3;UBERON:0006553!1.23e-15!3;UBERON:0003074!1.23e-15!3;UBERON:0003060!1.23e-15!3;UBERON:0006834!1.20e-12!1;UBERON:0001723!2.59e-12!1;UBERON:0001033!2.59e-12!1;UBERON:0010056!2.59e-12!1;UBERON:0005795!4.32e-12!4;UBERON:0000995!4.32e-12!4;UBERON:0000080!5.57e-12!4;UBERON:0005904!5.57e-12!4;UBERON:0006947!5.57e-12!4;UBERON:0002120!5.57e-12!4;UBERON:0004054!5.57e-12!4;UBERON:0004875!5.57e-12!4;UBERON:0004876!5.57e-12!4;UBERON:0005721!5.57e-12!4;UBERON:0005754!5.57e-12!4;UBERON:0007297!5.57e-12!4;UBERON:0003975!7.27e-10!5;UBERON:0000058!2.66e-08!6;UBERON:0003133!8.66e-08!24;UBERON:0002113!1.14e-07!14;UBERON:0003918!1.14e-07!14;UBERON:0005095!1.14e-07!14;UBERON:0007687!1.14e-07!14;UBERON:0005156!3.25e-07!26;UBERON:0000990!3.25e-07!26;UBERON:0000078!8.63e-07!2;UBERON:0000165!8.63e-07!2;UBERON:0000166!8.63e-07!2;UBERON:0000930!8.63e-07!2;UBERON:0006554!8.78e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.74e-44,1;UBERON:0004175,1.98e-20,9;UBERON:0001301,1.12e-15,3;UBERON:0006555,1.12e-15,3;UBERON:0005103,1.12e-15,3;UBERON:0000083,1.12e-15,3;UBERON:0009201,1.12e-15,3;UBERON:0004819,1.12e-15,3;UBERON:0006553,1.12e-15,3;UBERON:0003074,1.12e-15,3;UBERON:0003060,1.12e-15,3;UBERON:0005795,3.12e-12,4;UBERON:0000995,3.12e-12,4;UBERON:0000080,4.02e-12,4;UBERON:0005904,4.02e-12,4;UBERON:0006947,4.02e-12,4;UBERON:0002120,4.02e-12,4;UBERON:0004054,4.02e-12,4;UBERON:0004875,4.02e-12,4;UBERON:0004876,4.02e-12,4;UBERON:0005721,4.02e-12,4;UBERON:0005754,4.02e-12,4;UBERON:0007297,4.02e-12,4;UBERON:0003975,4.56e-10,5;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26;UBERON:0000058,1.64e-07,7;UBERON:0003134,8.61e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,3.53811861807145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,6.00583921443782,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:92052545..92052547,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=566 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:92052545..92052547,+ | |||
|id=chr16:92052545..92052547,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004175!4.69e-20!9;UBERON:0001301!1.23e-15!3;UBERON:0006555!1.23e-15!3;UBERON:0005103!1.23e-15!3;UBERON:0000083!1.23e-15!3;UBERON:0009201!1.23e-15!3;UBERON:0004819!1.23e-15!3;UBERON:0006553!1.23e-15!3;UBERON:0003074!1.23e-15!3;UBERON:0003060!1.23e-15!3;UBERON:0006834!1.20e-12!1;UBERON:0001723!2.59e-12!1;UBERON:0001033!2.59e-12!1;UBERON:0010056!2.59e-12!1;UBERON:0005795!4.32e-12!4;UBERON:0000995!4.32e-12!4;UBERON:0000080!5.57e-12!4;UBERON:0005904!5.57e-12!4;UBERON:0006947!5.57e-12!4;UBERON:0002120!5.57e-12!4;UBERON:0004054!5.57e-12!4;UBERON:0004875!5.57e-12!4;UBERON:0004876!5.57e-12!4;UBERON:0005721!5.57e-12!4;UBERON:0005754!5.57e-12!4;UBERON:0007297!5.57e-12!4;UBERON:0003975!7.27e-10!5;UBERON:0000058!2.66e-08!6;UBERON:0003133!8.66e-08!24;UBERON:0002113!1.14e-07!14;UBERON:0003918!1.14e-07!14;UBERON:0005095!1.14e-07!14;UBERON:0007687!1.14e-07!14;UBERON:0005156!3.25e-07!26;UBERON:0000990!3.25e-07!26;UBERON:0000078!8.63e-07!2;UBERON:0000165!8.63e-07!2;UBERON:0000166!8.63e-07!2;UBERON:0000930!8.63e-07!2;UBERON:0006554!8.78e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.74e-44,1;UBERON:0004175,1.98e-20,9;UBERON:0001301,1.12e-15,3;UBERON:0006555,1.12e-15,3;UBERON:0005103,1.12e-15,3;UBERON:0000083,1.12e-15,3;UBERON:0009201,1.12e-15,3;UBERON:0004819,1.12e-15,3;UBERON:0006553,1.12e-15,3;UBERON:0003074,1.12e-15,3;UBERON:0003060,1.12e-15,3;UBERON:0005795,3.12e-12,4;UBERON:0000995,3.12e-12,4;UBERON:0000080,4.02e-12,4;UBERON:0005904,4.02e-12,4;UBERON:0006947,4.02e-12,4;UBERON:0002120,4.02e-12,4;UBERON:0004054,4.02e-12,4;UBERON:0004875,4.02e-12,4;UBERON:0004876,4.02e-12,4;UBERON:0005721,4.02e-12,4;UBERON:0005754,4.02e-12,4;UBERON:0007297,4.02e-12,4;UBERON:0003975,4.56e-10,5;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26;UBERON:0000058,1.64e-07,7;UBERON:0003134,8.61e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,3.53811861807145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,6.00583921443782,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:92052545..92052547,+ | |||
}} |
Revision as of 13:19, 13 September 2013
Short description: | p@chr16:92052545..92052547, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:92052545..92052547, + |
Coexpression cluster: | MCL_coexpression_mm9:566 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 2.74e-44 | 1 |
internal genitalia | 1.98e-20 | 9 |
epididymis | 1.12e-15 | 3 |
excretory tube | 1.12e-15 | 3 |
mesonephric epithelium | 1.12e-15 | 3 |
mesonephric tubule | 1.12e-15 | 3 |
nephric duct | 1.12e-15 | 3 |
kidney epithelium | 1.12e-15 | 3 |
renal duct | 1.12e-15 | 3 |
mesonephric duct | 1.12e-15 | 3 |
pronephric duct | 1.12e-15 | 3 |
embryonic uterus | 3.12e-12 | 4 |
uterus | 3.12e-12 | 4 |
mesonephros | 4.02e-12 | 4 |
duct of male reproductive system | 4.02e-12 | 4 |
male genital duct | 4.02e-12 | 4 |
pronephros | 4.02e-12 | 4 |
internal male genitalia | 4.02e-12 | 4 |
nephrogenic cord | 4.02e-12 | 4 |
urogenital ridge | 4.02e-12 | 4 |
pronephric mesoderm | 4.02e-12 | 4 |
rostral part of nephrogenic cord | 4.02e-12 | 4 |
presumptive pronephric mesoderm | 4.02e-12 | 4 |
internal female genitalia | 4.56e-10 | 5 |
reproductive organ | 1.75e-08 | 24 |
reproductive structure | 6.33e-08 | 26 |
reproductive system | 6.33e-08 | 26 |
duct | 1.64e-07 | 7 |
female reproductive organ | 8.61e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.