FFCP PHASE1:Mm9::chr13:42961804..42961819,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=218194|HGNC=|MCL_coexpression_id=147|UniProt=B1B1B8|association_with_transcript=188bp_to_ENSMUST00000131942,uc007qfr.1_5end|description=CAGE_peak_16_at_Phactr1_5end|id=chr13:42961804..42961819,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,2.79e-07,1;CL:0002078,2.79e-07,1;CL:0000115,2.79e-07,1;CL:0002262,2.79e-07,1;CL:1000398,2.79e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!5.47e-08!17;UBERON:0002048!2.70e-07!14;UBERON:0000117!2.70e-07!14;UBERON:0000171!2.70e-07!14;UBERON:0000170!2.70e-07!14;UBERON:0005597!2.70e-07!14;UBERON:0000118!2.70e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.47e-34,14;UBERON:0000117,6.47e-34,14;UBERON:0000171,6.47e-34,14;UBERON:0000170,6.47e-34,14;UBERON:0005597,6.47e-34,14;UBERON:0000118,6.47e-34,14;UBERON:0005153,8.86e-28,17;UBERON:0005178,8.86e-28,17;UBERON:0005181,8.86e-28,17;UBERON:0002224,8.86e-28,17;UBERON:0000915,8.86e-28,17;UBERON:0008947,8.86e-28,17;UBERON:0003258,8.86e-28,17;UBERON:0005157,1.77e-23,20;UBERON:0000065,6.04e-11,41;UBERON:0001004,1.17e-10,42;UBERON:0009569,1.18e-09,66;UBERON:0002100,1.29e-09,90;UBERON:0005177,1.97e-09,79;UBERON:0005911,3.57e-09,69;UBERON:0001041,1.03e-07,80;UBERON:0002394,2.79e-07,1;UBERON:0001281,2.79e-07,1;UBERON:0000353,2.79e-07,1;UBERON:0003497,2.79e-07,1;UBERON:0003909,2.79e-07,1;UBERON:0003928,2.79e-07,1;UBERON:0003835,2.79e-07,1;UBERON:0003513,2.79e-07,1;UBERON:0001280,2.79e-07,1;UBERON:0004647,2.79e-07,1;UBERON:0002294,2.79e-07,1;UBERON:0001173,2.79e-07,1;UBERON:0004912,2.79e-07,1;UBERON:0005171,2.79e-07,1;UBERON:0001255,4.83e-07,1;UBERON:0001556,4.83e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.101376931219515,0.367093504323363,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0,0,0,0,0.23517741427141,0,0.247194967734374,0.86759614151947,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0.20778804455956,0,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.56748166682099,0.877199924551994,0.219550115291051,0.536825675041487,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.648540907100142,0,0,1.11642284300551,0.312037673114561,0,0,0,8.12914036733061,0,0,0,0,0.502518772325447,1.90434912708811,1.17080188714679,1.7339865851681,3.10050565508285,1.43509291791738,5.40748938561935,6.56202931090403,6.36455857758651,0,0,0.983528546038072,0.275936746304732,0.642202359951168,0.234423373184406,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.283880170416537,0,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,1.35232715822533,0,1.28206136987086,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0,0.128050304809739,0.34461281373368,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p16@Phactr1}} | ||
|EntrezGene=218194 | |||
|HGNC= | |||
|MCL_coexpression_id=147 | |||
|UniProt=B1B1B8 | |||
|association_with_transcript=188bp_to_ENSMUST00000131942,uc007qfr.1_5end | |||
|description=CAGE_peak_16_at_Phactr1_5end | |||
|id=chr13:42961804..42961819,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.79e-07,1;CL:0002078,2.79e-07,1;CL:0000115,2.79e-07,1;CL:0002262,2.79e-07,1;CL:1000398,2.79e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!5.47e-08!17;UBERON:0002048!2.70e-07!14;UBERON:0000117!2.70e-07!14;UBERON:0000171!2.70e-07!14;UBERON:0000170!2.70e-07!14;UBERON:0005597!2.70e-07!14;UBERON:0000118!2.70e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.47e-34,14;UBERON:0000117,6.47e-34,14;UBERON:0000171,6.47e-34,14;UBERON:0000170,6.47e-34,14;UBERON:0005597,6.47e-34,14;UBERON:0000118,6.47e-34,14;UBERON:0005153,8.86e-28,17;UBERON:0005178,8.86e-28,17;UBERON:0005181,8.86e-28,17;UBERON:0002224,8.86e-28,17;UBERON:0000915,8.86e-28,17;UBERON:0008947,8.86e-28,17;UBERON:0003258,8.86e-28,17;UBERON:0005157,1.77e-23,20;UBERON:0000065,6.04e-11,41;UBERON:0001004,1.17e-10,42;UBERON:0009569,1.18e-09,66;UBERON:0002100,1.29e-09,90;UBERON:0005177,1.97e-09,79;UBERON:0005911,3.57e-09,69;UBERON:0001041,1.03e-07,80;UBERON:0002394,2.79e-07,1;UBERON:0001281,2.79e-07,1;UBERON:0000353,2.79e-07,1;UBERON:0003497,2.79e-07,1;UBERON:0003909,2.79e-07,1;UBERON:0003928,2.79e-07,1;UBERON:0003835,2.79e-07,1;UBERON:0003513,2.79e-07,1;UBERON:0001280,2.79e-07,1;UBERON:0004647,2.79e-07,1;UBERON:0002294,2.79e-07,1;UBERON:0001173,2.79e-07,1;UBERON:0004912,2.79e-07,1;UBERON:0005171,2.79e-07,1;UBERON:0001255,4.83e-07,1;UBERON:0001556,4.83e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.101376931219515,0.367093504323363,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0,0,0,0,0.23517741427141,0,0.247194967734374,0.86759614151947,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0.20778804455956,0,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.56748166682099,0.877199924551994,0.219550115291051,0.536825675041487,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.648540907100142,0,0,1.11642284300551,0.312037673114561,0,0,0,8.12914036733061,0,0,0,0,0.502518772325447,1.90434912708811,1.17080188714679,1.7339865851681,3.10050565508285,1.43509291791738,5.40748938561935,6.56202931090403,6.36455857758651,0,0,0.983528546038072,0.275936746304732,0.642202359951168,0.234423373184406,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.283880170416537,0,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,1.35232715822533,0,1.28206136987086,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0,0.128050304809739,0.34461281373368,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p16@Phactr1 | |||
}} |
Revision as of 00:34, 13 September 2013
Short description: | p16@Phactr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Phactr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:147 |
Association with transcript: | 188bp_to_ENSMUST00000131942, uc007qfr.1_5end |
EntrezGene: | Phactr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.79e-07 | 1 |
meso-epithelial cell | 2.79e-07 | 1 |
endothelial cell | 2.79e-07 | 1 |
endothelial cell of sinusoid | 2.79e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung | 6.47e-34 | 14 |
respiratory tube | 6.47e-34 | 14 |
respiration organ | 6.47e-34 | 14 |
pair of lungs | 6.47e-34 | 14 |
lung primordium | 6.47e-34 | 14 |
lung bud | 6.47e-34 | 14 |
epithelial bud | 8.86e-28 | 17 |
thoracic cavity element | 8.86e-28 | 17 |
thoracic segment organ | 8.86e-28 | 17 |
thoracic cavity | 8.86e-28 | 17 |
thoracic segment of trunk | 8.86e-28 | 17 |
respiratory primordium | 8.86e-28 | 17 |
endoderm of foregut | 8.86e-28 | 17 |
epithelial fold | 1.77e-23 | 20 |
respiratory tract | 6.04e-11 | 41 |
respiratory system | 1.17e-10 | 42 |
subdivision of trunk | 1.18e-09 | 66 |
trunk | 1.29e-09 | 90 |
trunk region element | 1.97e-09 | 79 |
endo-epithelium | 3.57e-09 | 69 |
foregut | 1.03e-07 | 80 |
bile duct | 2.79e-07 | 1 |
hepatic sinusoid | 2.79e-07 | 1 |
parenchyma | 2.79e-07 | 1 |
abdomen blood vessel | 2.79e-07 | 1 |
sinusoid | 2.79e-07 | 1 |
digestive system duct | 2.79e-07 | 1 |
abdominal segment blood vessel | 2.79e-07 | 1 |
trunk blood vessel | 2.79e-07 | 1 |
liver parenchyma | 2.79e-07 | 1 |
liver lobule | 2.79e-07 | 1 |
biliary system | 2.79e-07 | 1 |
biliary tree | 2.79e-07 | 1 |
biliary bud | 2.79e-07 | 1 |
hepatic duct | 2.79e-07 | 1 |
urinary bladder | 4.83e-07 | 1 |
lower urinary tract | 4.83e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.