FFCP PHASE1:Mm9::chr8:86424491..86424516,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330814|HGNC=|UniProt=D6RI60|association_with_transcript=19bp_to_ENSMUST00000124355_5end|description=CAGE_peak_4_at_Lphn1_5end|id=chr8:86424491..86424516,+|ontology_enrichment_celltype=CL:0000540!6.78e-15!33;CL:0000047!6.78e-15!33;CL:0000031!6.78e-15!33;CL:0000404!6.78e-15!33;CL:0000117!5.60e-14!23;CL:0000337!5.60e-14!23;CL:0002319!3.18e-13!43;CL:0000221!3.19e-13!44;CL:0000133!3.19e-13!44;CL:0000393!1.71e-12!39;CL:0000211!1.71e-12!39;CL:0000055!7.64e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.56e-20,23;CL:0000337,2.56e-20,23;CL:0000540,1.68e-19,33;CL:0000047,1.68e-19,33;CL:0000031,1.68e-19,33;CL:0000404,1.68e-19,33;CL:0002319,1.95e-16,43;CL:0000393,5.07e-16,39;CL:0000211,5.07e-16,39;CL:0000221,8.08e-16,44;CL:0000133,8.08e-16,44;CL:0002609,2.03e-07,6;CL:0002321,7.20e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.47e-25!73;UBERON:0005743!6.47e-25!73;UBERON:0000073!1.51e-23!75;UBERON:0001016!1.51e-23!75;UBERON:0004121!1.02e-20!102;UBERON:0000924!1.02e-20!102;UBERON:0006601!1.02e-20!102;UBERON:0002346!4.10e-19!71;UBERON:0003075!4.10e-19!71;UBERON:0007284!4.10e-19!71;UBERON:0002020!2.16e-18!34;UBERON:0001049!6.58e-18!52;UBERON:0005068!6.58e-18!52;UBERON:0006241!6.58e-18!52;UBERON:0007135!6.58e-18!52;UBERON:0000955!2.57e-16!50;UBERON:0006238!2.57e-16!50;UBERON:0003080!3.49e-16!40;UBERON:0002616!5.50e-16!49;UBERON:0002780!8.59e-16!39;UBERON:0001890!8.59e-16!39;UBERON:0006240!8.59e-16!39;UBERON:0003056!1.77e-15!49;UBERON:0002791!6.79e-15!29;UBERON:0003528!6.79e-15!29;UBERON:0001893!6.79e-15!29;UBERON:0000033!6.89e-14!63;UBERON:0000956!4.65e-12!21;UBERON:0001869!4.65e-12!21;UBERON:0000203!4.65e-12!21;UBERON:0002619!1.44e-09!17;UBERON:0000153!2.02e-08!94;UBERON:0007811!2.29e-07!86;UBERON:0002021!7.90e-07!10;UBERON:0000411!7.90e-07!10;UBERON:0001950!7.90e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.53e-29,73;UBERON:0001016,1.02e-27,75;UBERON:0002020,1.43e-23,34;UBERON:0000073,1.67e-22,54;UBERON:0001049,2.18e-20,52;UBERON:0005068,2.18e-20,52;UBERON:0006241,2.18e-20,52;UBERON:0007135,2.18e-20,52;UBERON:0003080,3.10e-19,40;UBERON:0004121,4.06e-19,95;UBERON:0000924,4.06e-19,95;UBERON:0006601,4.06e-19,95;UBERON:0002780,1.24e-18,39;UBERON:0001890,1.24e-18,39;UBERON:0006240,1.24e-18,39;UBERON:0003528,3.16e-18,29;UBERON:0002791,3.16e-18,29;UBERON:0001893,3.16e-18,29;UBERON:0002346,3.63e-17,64;UBERON:0003075,3.63e-17,64;UBERON:0007284,3.63e-17,64;UBERON:0000955,9.05e-16,47;UBERON:0006238,9.05e-16,47;UBERON:0002616,2.74e-15,46;UBERON:0000956,2.97e-15,21;UBERON:0001869,2.97e-15,21;UBERON:0000203,2.97e-15,21;UBERON:0003056,7.85e-15,49;UBERON:0010371,2.16e-13,73;UBERON:0002619,2.04e-11,17;UBERON:0010314,3.39e-09,92;UBERON:0002021,8.66e-09,10;UBERON:0000411,8.66e-09,10;UBERON:0001950,8.66e-09,10;UBERON:0000991,5.43e-07,18;UBERON:0005564,5.43e-07,18;UBERON:0002240,5.68e-07,6;UBERON:0005174,5.68e-07,6;UBERON:0001137,5.68e-07,6;UBERON:0001948,8.03e-07,5;UBERON:0002315,8.03e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.436050312760893,0.439372365468944,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,1.82084814773638,3.70293685490423,3.80298842103708,0,0.889294796111139,0,0,0,2.99600110518405,2.30530983192933,7.36196247390191,4.05017814995072,3.99617426567626,7.9982275633065,5.07997644188711,4.77714116938321,1.91690942036473,5.51531271966013,3.30347642998166,2.93680877595932,1.99688493233117,3.16527090552465,1.46380229763855,3.64639359389732,1.95428099300967,1.68828783009504,0.61119299110724,6.48182888042069,5.69486723196412,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.445326417194474,0.867426633830679,0.608930956624282,0.922461989024234,0.452167921657868,1.41106448562846,0.376999773989026,0,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.49790639404823,0.457500602818626,8.41884159156192,2.60736480288415,1.79000820131231,1.45451631191692,1.62241263067758,0.611036183101898,0.124406970610093,0,0,0.390361328888111,0.919608417733892,0.900310649026746,0.30140963567143,1.7009124787832,0.640568601424249,0.843315521037559,0.258703370739016,0.646703978798527,1.32374256117473,1.05570674498369,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,2.18937693500343,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,3.57492912559016,6.89460902941206,0,0,1.06644125267617,0.464473343720877,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,1.13800740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| ||
|EntrezGene=330814 | |||
|HGNC= | |||
|UniProt=D6RI60 | |||
|association_with_transcript=19bp_to_ENSMUST00000124355_5end | |||
|description=CAGE_peak_4_at_Lphn1_5end | |||
|id=chr8:86424491..86424516,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.78e-15!33;CL:0000047!6.78e-15!33;CL:0000031!6.78e-15!33;CL:0000404!6.78e-15!33;CL:0000117!5.60e-14!23;CL:0000337!5.60e-14!23;CL:0002319!3.18e-13!43;CL:0000221!3.19e-13!44;CL:0000133!3.19e-13!44;CL:0000393!1.71e-12!39;CL:0000211!1.71e-12!39;CL:0000055!7.64e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.56e-20,23;CL:0000337,2.56e-20,23;CL:0000540,1.68e-19,33;CL:0000047,1.68e-19,33;CL:0000031,1.68e-19,33;CL:0000404,1.68e-19,33;CL:0002319,1.95e-16,43;CL:0000393,5.07e-16,39;CL:0000211,5.07e-16,39;CL:0000221,8.08e-16,44;CL:0000133,8.08e-16,44;CL:0002609,2.03e-07,6;CL:0002321,7.20e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.47e-25!73;UBERON:0005743!6.47e-25!73;UBERON:0000073!1.51e-23!75;UBERON:0001016!1.51e-23!75;UBERON:0004121!1.02e-20!102;UBERON:0000924!1.02e-20!102;UBERON:0006601!1.02e-20!102;UBERON:0002346!4.10e-19!71;UBERON:0003075!4.10e-19!71;UBERON:0007284!4.10e-19!71;UBERON:0002020!2.16e-18!34;UBERON:0001049!6.58e-18!52;UBERON:0005068!6.58e-18!52;UBERON:0006241!6.58e-18!52;UBERON:0007135!6.58e-18!52;UBERON:0000955!2.57e-16!50;UBERON:0006238!2.57e-16!50;UBERON:0003080!3.49e-16!40;UBERON:0002616!5.50e-16!49;UBERON:0002780!8.59e-16!39;UBERON:0001890!8.59e-16!39;UBERON:0006240!8.59e-16!39;UBERON:0003056!1.77e-15!49;UBERON:0002791!6.79e-15!29;UBERON:0003528!6.79e-15!29;UBERON:0001893!6.79e-15!29;UBERON:0000033!6.89e-14!63;UBERON:0000956!4.65e-12!21;UBERON:0001869!4.65e-12!21;UBERON:0000203!4.65e-12!21;UBERON:0002619!1.44e-09!17;UBERON:0000153!2.02e-08!94;UBERON:0007811!2.29e-07!86;UBERON:0002021!7.90e-07!10;UBERON:0000411!7.90e-07!10;UBERON:0001950!7.90e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.53e-29,73;UBERON:0001016,1.02e-27,75;UBERON:0002020,1.43e-23,34;UBERON:0000073,1.67e-22,54;UBERON:0001049,2.18e-20,52;UBERON:0005068,2.18e-20,52;UBERON:0006241,2.18e-20,52;UBERON:0007135,2.18e-20,52;UBERON:0003080,3.10e-19,40;UBERON:0004121,4.06e-19,95;UBERON:0000924,4.06e-19,95;UBERON:0006601,4.06e-19,95;UBERON:0002780,1.24e-18,39;UBERON:0001890,1.24e-18,39;UBERON:0006240,1.24e-18,39;UBERON:0003528,3.16e-18,29;UBERON:0002791,3.16e-18,29;UBERON:0001893,3.16e-18,29;UBERON:0002346,3.63e-17,64;UBERON:0003075,3.63e-17,64;UBERON:0007284,3.63e-17,64;UBERON:0000955,9.05e-16,47;UBERON:0006238,9.05e-16,47;UBERON:0002616,2.74e-15,46;UBERON:0000956,2.97e-15,21;UBERON:0001869,2.97e-15,21;UBERON:0000203,2.97e-15,21;UBERON:0003056,7.85e-15,49;UBERON:0010371,2.16e-13,73;UBERON:0002619,2.04e-11,17;UBERON:0010314,3.39e-09,92;UBERON:0002021,8.66e-09,10;UBERON:0000411,8.66e-09,10;UBERON:0001950,8.66e-09,10;UBERON:0000991,5.43e-07,18;UBERON:0005564,5.43e-07,18;UBERON:0002240,5.68e-07,6;UBERON:0005174,5.68e-07,6;UBERON:0001137,5.68e-07,6;UBERON:0001948,8.03e-07,5;UBERON:0002315,8.03e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.436050312760893,0.439372365468944,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,1.82084814773638,3.70293685490423,3.80298842103708,0,0.889294796111139,0,0,0,2.99600110518405,2.30530983192933,7.36196247390191,4.05017814995072,3.99617426567626,7.9982275633065,5.07997644188711,4.77714116938321,1.91690942036473,5.51531271966013,3.30347642998166,2.93680877595932,1.99688493233117,3.16527090552465,1.46380229763855,3.64639359389732,1.95428099300967,1.68828783009504,0.61119299110724,6.48182888042069,5.69486723196412,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.445326417194474,0.867426633830679,0.608930956624282,0.922461989024234,0.452167921657868,1.41106448562846,0.376999773989026,0,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.49790639404823,0.457500602818626,8.41884159156192,2.60736480288415,1.79000820131231,1.45451631191692,1.62241263067758,0.611036183101898,0.124406970610093,0,0,0.390361328888111,0.919608417733892,0.900310649026746,0.30140963567143,1.7009124787832,0.640568601424249,0.843315521037559,0.258703370739016,0.646703978798527,1.32374256117473,1.05570674498369,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,2.18937693500343,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,3.57492912559016,6.89460902941206,0,0,1.06644125267617,0.464473343720877,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,1.13800740571849,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.350679099451593,0.632365371242573,0.295220295959204,0,0,0,0.333690211432188,0.196558995113203,0,0.405720242777006,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,1.51593129416388,0.488894929326078,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,1.10344600874334,0,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0.160550589987792,0.703270119553219,0.491804836130026,0,0.94652465824877,1.56175497718655,1.29254038639679,1.43381278771531,0.445597348164788,0.849229592366497,2.02405350837447,1.46127928955656,1.18586333383957,1.28528526568723,0.709700426041343,1.6025904330053,2.44330439030364,0.659880491890142,0,0.485561272309963,0,0,1.18120757152309,0.307435147943927,0,0,0.356497378384721,0,0,0,0,1.44048875225048,0.776152102696527,0.214337035031592,2.12808280370728,1.24858172321449,1.81003922662333,0.608929898229199,0.23467170806371,0,0.220528398054962,0.16488625294148,0.645857706783622,0.422190474497091,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0.412773735926445,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0.632671987162271,0.813277868507395,0.540026704109006,0.418176592028937,0.218362563746178,0.539457385539283,0.41326727862668,0,0.259229946583586,0,1.12738587736838,1.79419855252775,1.32366792365678,1.55560950675238,1.29159823477731,1.520605129417,4.5769323071844,2.73429208172295,3.98465508817701,1.20792060413003,1.15212002503146,0,1.21635129174099,0.205421914329655,0,0.537080087002444,0.198681354781265,0.360586348559907,0.295379054349154,0.403865799792591,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,3.32978930061097,1.70456327558004,0.671538465456314,0,0.750729901804728,0.183151624267265,0,0,5.0827665835536,4.14292712856459,9.16632821503035,7.04598047609119,5.48066015816514,0.755393897389701,4.72515750162264,2.70192721934532,2.71885445390523,1.55328093525546,0.415149390336707,1.59609949360412,1.02440163452481,0.243106717068294,0.838452650511929,0.919217542250071,0.666740183404846,1.44224540067226,1.28367683836726,0.505394423527595,0.50695859978048,1.69763707247469,0.936415074698824,1.02440243847791,1.14870937911227,2.85776214769844,1.15884325944855,0,0.412085900803307,1.17759136107518,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.592302255241736,0.548783918618318,1.05227884575137,1.49384525230448,1.68342681497322,2.49133538060766,0.788035859004508,2.04615521584845,1.23949472948773,0.771626443924566,2.74791635731741,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0 | |||
|short_description=p4@Lphn1 | |||
}} |
Revision as of 16:14, 14 September 2013
Short description: | p4@Lphn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lphn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000124355_5end |
EntrezGene: | Lphn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.56e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.56e-20 | 23 |
neuron | 1.68e-19 | 33 |
neuronal stem cell | 1.68e-19 | 33 |
neuroblast | 1.68e-19 | 33 |
electrically signaling cell | 1.68e-19 | 33 |
neural cell | 1.95e-16 | 43 |
electrically responsive cell | 5.07e-16 | 39 |
electrically active cell | 5.07e-16 | 39 |
ectodermal cell | 8.08e-16 | 44 |
neurectodermal cell | 8.08e-16 | 44 |
neuron of cerebral cortex | 2.03e-07 | 6 |
embryonic cell | 7.20e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.