FFCP PHASE1:Mm9::chr11:112667912..112667916,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:112667912..112667916,+|id=chr11:112667912..112667916,+|ontology_enrichment_celltype=CL:0000239!2.44e-19!6;CL:0000677!2.44e-19!6;CL:0000212!2.44e-19!6;CL:0000584!2.44e-19!6;CL:0000075!1.08e-16!7;CL:0002563!3.72e-13!9;CL:0002251!3.72e-13!9;CL:0002076!3.61e-08!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.24e-12,6;CL:0000677,1.24e-12,6;CL:0000584,1.24e-12,6;CL:0000075,5.58e-11,7;CL:0002563,9.19e-09,9;CL:0002251,9.19e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.68e-30!15;UBERON:0001962!7.61e-26!2;UBERON:0001961!7.61e-26!2;UBERON:0001744!7.61e-26!2;UBERON:0004923!5.37e-19!24;UBERON:0002465!1.31e-17!3;UBERON:0001242!6.33e-16!13;UBERON:0000060!6.33e-16!13;UBERON:0001262!6.33e-16!13;UBERON:0004786!6.33e-16!13;UBERON:0003199!6.50e-14!1;UBERON:0003350!3.72e-13!9;UBERON:0004808!3.72e-13!9;UBERON:0001277!3.72e-13!9;UBERON:0000485!6.77e-11!11;UBERON:0000160!1.44e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.18e-35,2;UBERON:0001961,3.18e-35,2;UBERON:0001744,3.18e-35,2;UBERON:0000344,1.68e-29,15;UBERON:0002465,6.68e-24,3;UBERON:0004923,9.72e-19,24;UBERON:0003199,1.16e-18,1;UBERON:0001242,6.03e-13,13;UBERON:0001262,6.03e-13,13;UBERON:0004786,6.03e-13,13;UBERON:0003350,9.19e-09,9;UBERON:0004808,9.19e-09,9;UBERON:0001277,9.19e-09,9;UBERON:0000485,2.41e-07,11;UBERON:0000331,3.18e-07,3;UBERON:0002116,3.18e-07,3;UBERON:0001204,3.18e-07,3;UBERON:0001168,3.18e-07,3|phase1_expression=0,0,0,2.72217790176147,3.50627010962443,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.75291137280604,0,0,0,10.2612646506442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:112667912..112667916,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:112667912..112667916,+ | |||
|id=chr11:112667912..112667916,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.44e-19!6;CL:0000677!2.44e-19!6;CL:0000212!2.44e-19!6;CL:0000584!2.44e-19!6;CL:0000075!1.08e-16!7;CL:0002563!3.72e-13!9;CL:0002251!3.72e-13!9;CL:0002076!3.61e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.24e-12,6;CL:0000677,1.24e-12,6;CL:0000584,1.24e-12,6;CL:0000075,5.58e-11,7;CL:0002563,9.19e-09,9;CL:0002251,9.19e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.68e-30!15;UBERON:0001962!7.61e-26!2;UBERON:0001961!7.61e-26!2;UBERON:0001744!7.61e-26!2;UBERON:0004923!5.37e-19!24;UBERON:0002465!1.31e-17!3;UBERON:0001242!6.33e-16!13;UBERON:0000060!6.33e-16!13;UBERON:0001262!6.33e-16!13;UBERON:0004786!6.33e-16!13;UBERON:0003199!6.50e-14!1;UBERON:0003350!3.72e-13!9;UBERON:0004808!3.72e-13!9;UBERON:0001277!3.72e-13!9;UBERON:0000485!6.77e-11!11;UBERON:0000160!1.44e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.18e-35,2;UBERON:0001961,3.18e-35,2;UBERON:0001744,3.18e-35,2;UBERON:0000344,1.68e-29,15;UBERON:0002465,6.68e-24,3;UBERON:0004923,9.72e-19,24;UBERON:0003199,1.16e-18,1;UBERON:0001242,6.03e-13,13;UBERON:0001262,6.03e-13,13;UBERON:0004786,6.03e-13,13;UBERON:0003350,9.19e-09,9;UBERON:0004808,9.19e-09,9;UBERON:0001277,9.19e-09,9;UBERON:0000485,2.41e-07,11;UBERON:0000331,3.18e-07,3;UBERON:0002116,3.18e-07,3;UBERON:0001204,3.18e-07,3;UBERON:0001168,3.18e-07,3 | |||
|phase1_expression=0,0,0,2.72217790176147,3.50627010962443,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.75291137280604,0,0,0,10.2612646506442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:112667912..112667916,+ | |||
}} |
Revision as of 18:41, 12 September 2013
Short description: | p@chr11:112667912..112667916, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:112667912..112667916, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.24e-12 | 6 |
gut absorptive cell | 1.24e-12 | 6 |
enterocyte | 1.24e-12 | 6 |
columnar/cuboidal epithelial cell | 5.58e-11 | 7 |
intestinal epithelial cell | 9.19e-09 | 9 |
epithelial cell of alimentary canal | 9.19e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 3.18e-35 | 2 |
mucosa-associated lymphoid tissue | 3.18e-35 | 2 |
lymphoid tissue | 3.18e-35 | 2 |
mucosa | 1.68e-29 | 15 |
lymphoid system | 6.68e-24 | 3 |
organ component layer | 9.72e-19 | 24 |
egg chamber | 1.16e-18 | 1 |
intestinal mucosa | 6.03e-13 | 13 |
wall of intestine | 6.03e-13 | 13 |
gastrointestinal system mucosa | 6.03e-13 | 13 |
epithelium of mucosa | 9.19e-09 | 9 |
gastrointestinal system epithelium | 9.19e-09 | 9 |
intestinal epithelium | 9.19e-09 | 9 |
simple columnar epithelium | 2.41e-07 | 11 |
ileal mucosa | 3.18e-07 | 3 |
ileum | 3.18e-07 | 3 |
mucosa of small intestine | 3.18e-07 | 3 |
wall of small intestine | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.