FFCP PHASE1:Mm9::chr6:122436375..122436444,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108653|HGNC=|MCL_coexpression_id=87|UniProt=|association_with_transcript=-35bp_to_ENSMUST00000079990_5end|description=CAGE_peak_3_at_Rimklb_5end|id=chr6:122436375..122436444,-|ontology_enrichment_celltype=CL:0000117!3.18e-16!23;CL:0000337!3.18e-16!23;CL:0000540!7.16e-14!33;CL:0000047!7.16e-14!33;CL:0000031!7.16e-14!33;CL:0000404!7.16e-14!33;CL:0000221!3.68e-11!44;CL:0000133!3.68e-11!44;CL:0002319!1.40e-10!43;CL:0000393!4.07e-10!39;CL:0000211!4.07e-10!39;CL:0000055!1.41e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.84e-27,23;CL:0000337,2.84e-27,23;CL:0000540,5.91e-20,33;CL:0000047,5.91e-20,33;CL:0000031,5.91e-20,33;CL:0000404,5.91e-20,33;CL:0000393,1.30e-15,39;CL:0000211,1.30e-15,39;CL:0000221,2.54e-14,44;CL:0000133,2.54e-14,44;CL:0002319,2.05e-13,43;CL:0002609,6.03e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.91e-19!73;UBERON:0005743!1.91e-19!73;UBERON:0000033!2.59e-19!63;UBERON:0000073!2.80e-19!75;UBERON:0001016!2.80e-19!75;UBERON:0003056!4.71e-19!49;UBERON:0002346!1.26e-18!71;UBERON:0003075!1.26e-18!71;UBERON:0007284!1.26e-18!71;UBERON:0001049!2.86e-18!52;UBERON:0005068!2.86e-18!52;UBERON:0006241!2.86e-18!52;UBERON:0007135!2.86e-18!52;UBERON:0004121!1.71e-17!102;UBERON:0000924!1.71e-17!102;UBERON:0006601!1.71e-17!102;UBERON:0002020!4.06e-17!34;UBERON:0000955!2.29e-15!50;UBERON:0006238!2.29e-15!50;UBERON:0003080!4.40e-15!40;UBERON:0002616!6.30e-15!49;UBERON:0002780!7.72e-15!39;UBERON:0001890!7.72e-15!39;UBERON:0006240!7.72e-15!39;UBERON:0002791!3.60e-13!29;UBERON:0003528!3.60e-13!29;UBERON:0001893!3.60e-13!29;UBERON:0000153!1.24e-11!94;UBERON:0007811!7.43e-11!86;UBERON:0000956!2.42e-09!21;UBERON:0001869!2.42e-09!21;UBERON:0000203!2.42e-09!21;UBERON:0002619!3.96e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.26e-26,34;UBERON:0002346,6.15e-23,64;UBERON:0003075,6.15e-23,64;UBERON:0007284,6.15e-23,64;UBERON:0010371,2.37e-21,73;UBERON:0000073,1.76e-20,54;UBERON:0003056,1.96e-20,49;UBERON:0004121,3.68e-20,95;UBERON:0000924,3.68e-20,95;UBERON:0006601,3.68e-20,95;UBERON:0003528,9.61e-20,29;UBERON:0002791,9.61e-20,29;UBERON:0001893,9.61e-20,29;UBERON:0001017,2.40e-19,73;UBERON:0001049,1.35e-18,52;UBERON:0005068,1.35e-18,52;UBERON:0006241,1.35e-18,52;UBERON:0007135,1.35e-18,52;UBERON:0001016,1.71e-18,75;UBERON:0002780,2.02e-16,39;UBERON:0001890,2.02e-16,39;UBERON:0006240,2.02e-16,39;UBERON:0003080,8.39e-16,40;UBERON:0000955,1.96e-14,47;UBERON:0006238,1.96e-14,47;UBERON:0010314,2.80e-14,92;UBERON:0002616,8.53e-14,46;UBERON:0000956,7.92e-13,21;UBERON:0001869,7.92e-13,21;UBERON:0000203,7.92e-13,21;UBERON:0002619,2.76e-10,17;UBERON:0001948,2.54e-08,5;UBERON:0002315,2.54e-08,5;UBERON:0002420,2.75e-08,8;UBERON:0007245,2.75e-08,8;UBERON:0010009,2.75e-08,8;UBERON:0010011,2.75e-08,8;UBERON:0000454,2.75e-08,8;UBERON:0002021,6.14e-07,10;UBERON:0000411,6.14e-07,10;UBERON:0001950,6.14e-07,10;UBERON:0000020,8.31e-07,12;UBERON:0001032,8.31e-07,12;UBERON:0004456,8.31e-07,12;UBERON:0002240,9.01e-07,6;UBERON:0005174,9.01e-07,6;UBERON:0001137,9.01e-07,6|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,7.48570905180512,6.34789175126439,9.50747105259269,0,0,0.449949858640699,0,0,0.299600110518405,0,9.85051316930538,10.6654691282036,5.8890989178387,14.568200204594,11.9269012113871,7.7169203505421,9.29701068876893,5.51531271966013,0,3.19218345212969,2.76491759861238,9.10015385338338,9.97215315266265,13.022834263919,3.35019598801657,2.25105044012672,4.27835093775068,12.0797720044204,14.9490264839058,10.8111678578674,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,4.22530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.748953197024114,0,6.28271760564322,0,1.79000820131231,1.0389402227978,0.648965052271031,0.611036183101898,0.373220911830279,0.505445516867349,0.210441855886474,1.82168620147785,2.06911893990126,1.80062129805349,1.65775299619287,2.17716797284249,2.562274405697,2.34254311399322,0.517406741478031,1.94011193639558,3.21480336285293,2.99116911078713,0.43839146485515,1.11218899690239,0,0,1.19420560091096,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,5.35103984372279,0,0,1.06644125267617,0.696710015581316,0.38660238396628,0.605050573870028,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.913988100877831,0,0.407302655690628,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0,0,0,0,0.589676985339609,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0,0.339490171550376,0.704070744865506,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,1.40654023910644,0,0,0,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0,0,1.28528526568723,0.141940085208269,0.890328018336276,0.977321756121456,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0,0,0,0.680879211507576,1.98067203434441,1.16422815404479,0.857348140126369,0.886701168211368,0.535106452806212,0.493647061806363,0,0,0,1.32317038832977,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,2.81846469342095,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.117357238645754,0.2604087696879,1.46803082195995,2.41584120826006,1.72818003754719,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.240390899039938,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,2.82375921308533,2.76195141904306,2.29158205375759,2.57779773515531,2.05524755931193,2.2661816921691,4.05013500139084,0.45032120322422,1.81256963593682,0.51776031175182,1.14166082342594,3.19219898720825,2.21953687480374,1.45864030240976,1.04806581313991,0.367687016900028,0.44449345560323,1.23621034343337,0,1.01078884705519,0.760437899670719,0.754505365544305,1.12369808963859,0.576226371643824,1.20614484806788,0,0.927074607558844,0.77163688185482,0.824171801606613,0.441596760403192,1.02860775715625,0.887379030796687,2.14592570952589,1.16277133305863,0.941093804153306,0.930760686808441,0.914639864363863,0,0.407412341537585,0,0.593175090620871,1.18205378850676,1.22769312950907,0.929621047115796,1.15743966588685,1.49886346762768,0.233931608445408,1.28922632428979,0.382576664137687,0.220591419119515,0|short_description=p3@Rimklb}} | ||
|EntrezGene=108653 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENSMUST00000079990_5end | |||
|description=CAGE_peak_3_at_Rimklb_5end | |||
|id=chr6:122436375..122436444,- | |||
|ontology_enrichment_celltype=CL:0000117!3.18e-16!23;CL:0000337!3.18e-16!23;CL:0000540!7.16e-14!33;CL:0000047!7.16e-14!33;CL:0000031!7.16e-14!33;CL:0000404!7.16e-14!33;CL:0000221!3.68e-11!44;CL:0000133!3.68e-11!44;CL:0002319!1.40e-10!43;CL:0000393!4.07e-10!39;CL:0000211!4.07e-10!39;CL:0000055!1.41e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.84e-27,23;CL:0000337,2.84e-27,23;CL:0000540,5.91e-20,33;CL:0000047,5.91e-20,33;CL:0000031,5.91e-20,33;CL:0000404,5.91e-20,33;CL:0000393,1.30e-15,39;CL:0000211,1.30e-15,39;CL:0000221,2.54e-14,44;CL:0000133,2.54e-14,44;CL:0002319,2.05e-13,43;CL:0002609,6.03e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.91e-19!73;UBERON:0005743!1.91e-19!73;UBERON:0000033!2.59e-19!63;UBERON:0000073!2.80e-19!75;UBERON:0001016!2.80e-19!75;UBERON:0003056!4.71e-19!49;UBERON:0002346!1.26e-18!71;UBERON:0003075!1.26e-18!71;UBERON:0007284!1.26e-18!71;UBERON:0001049!2.86e-18!52;UBERON:0005068!2.86e-18!52;UBERON:0006241!2.86e-18!52;UBERON:0007135!2.86e-18!52;UBERON:0004121!1.71e-17!102;UBERON:0000924!1.71e-17!102;UBERON:0006601!1.71e-17!102;UBERON:0002020!4.06e-17!34;UBERON:0000955!2.29e-15!50;UBERON:0006238!2.29e-15!50;UBERON:0003080!4.40e-15!40;UBERON:0002616!6.30e-15!49;UBERON:0002780!7.72e-15!39;UBERON:0001890!7.72e-15!39;UBERON:0006240!7.72e-15!39;UBERON:0002791!3.60e-13!29;UBERON:0003528!3.60e-13!29;UBERON:0001893!3.60e-13!29;UBERON:0000153!1.24e-11!94;UBERON:0007811!7.43e-11!86;UBERON:0000956!2.42e-09!21;UBERON:0001869!2.42e-09!21;UBERON:0000203!2.42e-09!21;UBERON:0002619!3.96e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.26e-26,34;UBERON:0002346,6.15e-23,64;UBERON:0003075,6.15e-23,64;UBERON:0007284,6.15e-23,64;UBERON:0010371,2.37e-21,73;UBERON:0000073,1.76e-20,54;UBERON:0003056,1.96e-20,49;UBERON:0004121,3.68e-20,95;UBERON:0000924,3.68e-20,95;UBERON:0006601,3.68e-20,95;UBERON:0003528,9.61e-20,29;UBERON:0002791,9.61e-20,29;UBERON:0001893,9.61e-20,29;UBERON:0001017,2.40e-19,73;UBERON:0001049,1.35e-18,52;UBERON:0005068,1.35e-18,52;UBERON:0006241,1.35e-18,52;UBERON:0007135,1.35e-18,52;UBERON:0001016,1.71e-18,75;UBERON:0002780,2.02e-16,39;UBERON:0001890,2.02e-16,39;UBERON:0006240,2.02e-16,39;UBERON:0003080,8.39e-16,40;UBERON:0000955,1.96e-14,47;UBERON:0006238,1.96e-14,47;UBERON:0010314,2.80e-14,92;UBERON:0002616,8.53e-14,46;UBERON:0000956,7.92e-13,21;UBERON:0001869,7.92e-13,21;UBERON:0000203,7.92e-13,21;UBERON:0002619,2.76e-10,17;UBERON:0001948,2.54e-08,5;UBERON:0002315,2.54e-08,5;UBERON:0002420,2.75e-08,8;UBERON:0007245,2.75e-08,8;UBERON:0010009,2.75e-08,8;UBERON:0010011,2.75e-08,8;UBERON:0000454,2.75e-08,8;UBERON:0002021,6.14e-07,10;UBERON:0000411,6.14e-07,10;UBERON:0001950,6.14e-07,10;UBERON:0000020,8.31e-07,12;UBERON:0001032,8.31e-07,12;UBERON:0004456,8.31e-07,12;UBERON:0002240,9.01e-07,6;UBERON:0005174,9.01e-07,6;UBERON:0001137,9.01e-07,6 | |||
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,7.48570905180512,6.34789175126439,9.50747105259269,0,0,0.449949858640699,0,0,0.299600110518405,0,9.85051316930538,10.6654691282036,5.8890989178387,14.568200204594,11.9269012113871,7.7169203505421,9.29701068876893,5.51531271966013,0,3.19218345212969,2.76491759861238,9.10015385338338,9.97215315266265,13.022834263919,3.35019598801657,2.25105044012672,4.27835093775068,12.0797720044204,14.9490264839058,10.8111678578674,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,4.22530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.748953197024114,0,6.28271760564322,0,1.79000820131231,1.0389402227978,0.648965052271031,0.611036183101898,0.373220911830279,0.505445516867349,0.210441855886474,1.82168620147785,2.06911893990126,1.80062129805349,1.65775299619287,2.17716797284249,2.562274405697,2.34254311399322,0.517406741478031,1.94011193639558,3.21480336285293,2.99116911078713,0.43839146485515,1.11218899690239,0,0,1.19420560091096,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,5.35103984372279,0,0,1.06644125267617,0.696710015581316,0.38660238396628,0.605050573870028,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.913988100877831,0,0.407302655690628,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0,0,0,0,0.589676985339609,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0,0.339490171550376,0.704070744865506,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,1.40654023910644,0,0,0,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0,0,1.28528526568723,0.141940085208269,0.890328018336276,0.977321756121456,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0,0,0,0.680879211507576,1.98067203434441,1.16422815404479,0.857348140126369,0.886701168211368,0.535106452806212,0.493647061806363,0,0,0,1.32317038832977,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,2.81846469342095,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.117357238645754,0.2604087696879,1.46803082195995,2.41584120826006,1.72818003754719,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.240390899039938,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,2.82375921308533,2.76195141904306,2.29158205375759,2.57779773515531,2.05524755931193,2.2661816921691,4.05013500139084,0.45032120322422,1.81256963593682,0.51776031175182,1.14166082342594,3.19219898720825,2.21953687480374,1.45864030240976,1.04806581313991,0.367687016900028,0.44449345560323,1.23621034343337,0,1.01078884705519,0.760437899670719,0.754505365544305,1.12369808963859,0.576226371643824,1.20614484806788,0,0.927074607558844,0.77163688185482,0.824171801606613,0.441596760403192,1.02860775715625,0.887379030796687,2.14592570952589,1.16277133305863,0.941093804153306,0.930760686808441,0.914639864363863,0,0.407412341537585,0,0.593175090620871,1.18205378850676,1.22769312950907,0.929621047115796,1.15743966588685,1.49886346762768,0.233931608445408,1.28922632428979,0.382576664137687,0.220591419119515,0 | |||
|short_description=p3@Rimklb | |||
}} |
Revision as of 08:46, 14 September 2013
Short description: | p3@Rimklb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rimklb_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -35bp_to_ENSMUST00000079990_5end |
EntrezGene: | Rimklb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.84e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.84e-27 | 23 |
neuron | 5.91e-20 | 33 |
neuronal stem cell | 5.91e-20 | 33 |
neuroblast | 5.91e-20 | 33 |
electrically signaling cell | 5.91e-20 | 33 |
electrically responsive cell | 1.30e-15 | 39 |
electrically active cell | 1.30e-15 | 39 |
ectodermal cell | 2.54e-14 | 44 |
neurectodermal cell | 2.54e-14 | 44 |
neural cell | 2.05e-13 | 43 |
neuron of cerebral cortex | 6.03e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.