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FFCP PHASE1:Mm9::chr17:3115210..3115268,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=106583|HGNC=|UniProt=Q6DID3,Q8C9D3,Q3TBS5|association_with_transcript=238bp_to_ENSMUST00000076734,ENSMUST00000082356,ENSMUST00000170698,NM_134123,uc008aei.2,uc008aej.2_5end|description=CAGE_peak_2_at_Scaf8_5end|id=chr17:3115210..3115268,+|ontology_enrichment_celltype=CL:0000838!5.69e-08!12;CL:0000084!7.65e-08!11;CL:0000827!7.65e-08!11;CL:0000791!2.84e-07!9;CL:0000789!2.84e-07!9;CL:0002420!2.84e-07!9;CL:0002419!2.84e-07!9;CL:0000790!2.84e-07!9;CL:0000542!6.14e-07!13;CL:0000051!6.14e-07!13|ontology_enrichment_celltype_v019_2=CL:0000838,5.69e-08,12;CL:0000084,7.65e-08,11;CL:0000827,7.65e-08,11;CL:0000791,2.84e-07,9;CL:0000789,2.84e-07,9;CL:0002420,2.84e-07,9;CL:0002419,2.84e-07,9;CL:0000790,2.84e-07,9;CL:0000542,6.14e-07,13;CL:0000051,6.14e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!1.33e-08!131;UBERON:0009142!1.33e-08!131;UBERON:0000926!3.66e-08!193;UBERON:0004120!3.66e-08!193;UBERON:0006603!3.66e-08!193;UBERON:0005057!7.83e-08!51;UBERON:0000490!1.25e-07!66;UBERON:0005911!2.37e-07!69;UBERON:0000077!3.15e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.51e-08,35;UBERON:0001041,1.16e-07,80;UBERON:0000490,1.25e-07,66;UBERON:0005911,2.37e-07,69|phase1_expression=6.24580503708696,10.8182376368202,10.0099832665698,13.3084252975005,16.0286633582831,12.0873075776561,9.34450562382103,45.8387798217596,56.4562775828184,60.8567768437183,25.5114772656002,35.339066434934,36.8081569352092,35.6675241869509,17.9879271380458,18.0202987976945,11.8925519281785,20.5050407482854,23.8579114473985,18.2487550273153,14.2872727453797,21.5461364105921,18.2839852397255,9.75953779039781,5.73523202667925,3.44539178469012,6.8921919385452,8.61884930743556,7.41091335879858,7.81293402255785,10.199603490144,10.7955214488137,5.53558308826113,15.8481681015439,15.0202842270663,15.6260566636983,15.3127017196777,19.6709866446347,18.7520482685712,20.4174260149781,28.8233429135197,31.4200923080885,20.3914348273085,22.9132208715551,21.8974171434151,23.3104375245336,10.9534788208725,4.36050312760893,6.81027166476863,14.1933826324227,7.41928034614421,11.5002051491977,17.4493910300046,52.9514363668281,42.3478186919505,21.0952737549477,27.7937436740594,22.6895720602075,4.24864567805155,1.5869729378161,3.80298842103708,11.5207140903505,15.1180115338894,10.7987966073768,9.88866362566974,9.9467216092454,6.2916023208865,3.84218305321555,3.52544681848824,3.64516033495565,4.83747411108179,5.71301968807607,5.07997644188711,2.32732518508413,2.01275489138296,7.35375029288017,11.0115880999389,8.81042632787795,8.44835932909339,4.08847491963601,3.01909223887952,3.64639359389732,6.14202597803038,9.00420176050688,10.0846843532695,7.95497180778903,6.97621235915604,6.33758115806022,16.2811315666346,10.58001841495,37.1026545538148,12.9063581547208,33.9985666853875,16.1910957491345,22.7421746106684,28.6737207742295,10.8142203501449,16.5317412900716,9.87186817490901,14.1335829804136,5.0703631119605,21.815501160434,48.4129955442627,28.4426681261332,10.3915699685383,13.4280728701802,15.1657333504435,15.4148237620731,42.9836886854305,13.2113503767694,11.7970022200972,9.43842982767638,9.22461989024234,11.7563659631046,15.0513545133702,10.5559936716927,24.9666917411718,22.991297750266,19.4614321428972,16.6619855445831,15.6797478106879,21.819386391085,9.31958806090611,9.36898550436951,6.70229461803056,13.7946809812639,31.511377745057,11.9980546198682,23.2538515543708,8.83764772488454,6.8625090422794,2.51308704225729,9.03886464999838,7.67146371990992,6.64921742590592,6.65189178577806,17.3126918545538,14.8044295026011,10.6143558542143,12.416069497302,7.1566243629487,6.43725892413724,6.66229880279792,8.13806016312861,8.02830689985669,5.89323113310309,8.15205003669641,13.9699820199068,8.191583731448,12.1027891307404,10.9089696981648,10.9597866213787,14.1804097105055,15.6713474934975,19.7550850951626,16.1217756122979,7.72434506044558,12.0953516343916,14.7765019685708,9.32065976409758,10.5536726991493,8.82304101158973,12.7842157216014,11.8058539048442,8.63895832169318,6.51095045301142,10.7309360559848,8.52386999280337,10.0381508447223,11.3275550214576,13.7006288132496,14.0351987928319,12.0752563410078,12.4811969447146,11.3556572224629,3.80747065803352,15.8601015832223,12.9580777665137,9.81125952462076,12.5407802804637,12.7578786708872,13.3111126251406,13.5650606745371,12.935342575654,13.7613427847908,11.3642278759568,12.5667604400135,10.7436494902221,15.0122347081723,16.178749355776,16.4264917904768,13.9398891278057,13.6560888686219,17.8227679671177,22.5415471346161,14.8665469327079,13.5766741017338,14.0271639780637,14.6708766128277,14.7610147979602,13.6588893221996,11.7227305725711,21.6410417773619,15.1829046201646,16.5109555895091,13.2668646307064,15.8230894683032,15.4353382241547,11.7127891819453,14.6725030099913,15.4028465436284,10.4333337011471,11.5014565221884,14.8856379067401,13.7296576170407,15.1547326768267,14.351793081753,17.3679667690812,23.833161531492,9.09558776498327,14.1779529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|EntrezGene=106583
|HGNC=
|UniProt=Q6DID3,Q8C9D3,Q3TBS5
|association_with_transcript=238bp_to_ENSMUST00000076734,ENSMUST00000082356,ENSMUST00000170698,NM_134123,uc008aei.2,uc008aej.2_5end
|description=CAGE_peak_2_at_Scaf8_5end
|id=chr17:3115210..3115268,+
|ontology_enrichment_celltype=CL:0000838!5.69e-08!12;CL:0000084!7.65e-08!11;CL:0000827!7.65e-08!11;CL:0000791!2.84e-07!9;CL:0000789!2.84e-07!9;CL:0002420!2.84e-07!9;CL:0002419!2.84e-07!9;CL:0000790!2.84e-07!9;CL:0000542!6.14e-07!13;CL:0000051!6.14e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000838,5.69e-08,12;CL:0000084,7.65e-08,11;CL:0000827,7.65e-08,11;CL:0000791,2.84e-07,9;CL:0000789,2.84e-07,9;CL:0002420,2.84e-07,9;CL:0002419,2.84e-07,9;CL:0000790,2.84e-07,9;CL:0000542,6.14e-07,13;CL:0000051,6.14e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003104!1.33e-08!131;UBERON:0009142!1.33e-08!131;UBERON:0000926!3.66e-08!193;UBERON:0004120!3.66e-08!193;UBERON:0006603!3.66e-08!193;UBERON:0005057!7.83e-08!51;UBERON:0000490!1.25e-07!66;UBERON:0005911!2.37e-07!69;UBERON:0000077!3.15e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.51e-08,35;UBERON:0001041,1.16e-07,80;UBERON:0000490,1.25e-07,66;UBERON:0005911,2.37e-07,69
|phase1_expression=6.24580503708696,10.8182376368202,10.0099832665698,13.3084252975005,16.0286633582831,12.0873075776561,9.34450562382103,45.8387798217596,56.4562775828184,60.8567768437183,25.5114772656002,35.339066434934,36.8081569352092,35.6675241869509,17.9879271380458,18.0202987976945,11.8925519281785,20.5050407482854,23.8579114473985,18.2487550273153,14.2872727453797,21.5461364105921,18.2839852397255,9.75953779039781,5.73523202667925,3.44539178469012,6.8921919385452,8.61884930743556,7.41091335879858,7.81293402255785,10.199603490144,10.7955214488137,5.53558308826113,15.8481681015439,15.0202842270663,15.6260566636983,15.3127017196777,19.6709866446347,18.7520482685712,20.4174260149781,28.8233429135197,31.4200923080885,20.3914348273085,22.9132208715551,21.8974171434151,23.3104375245336,10.9534788208725,4.36050312760893,6.81027166476863,14.1933826324227,7.41928034614421,11.5002051491977,17.4493910300046,52.9514363668281,42.3478186919505,21.0952737549477,27.7937436740594,22.6895720602075,4.24864567805155,1.5869729378161,3.80298842103708,11.5207140903505,15.1180115338894,10.7987966073768,9.88866362566974,9.9467216092454,6.2916023208865,3.84218305321555,3.52544681848824,3.64516033495565,4.83747411108179,5.71301968807607,5.07997644188711,2.32732518508413,2.01275489138296,7.35375029288017,11.0115880999389,8.81042632787795,8.44835932909339,4.08847491963601,3.01909223887952,3.64639359389732,6.14202597803038,9.00420176050688,10.0846843532695,7.95497180778903,6.97621235915604,6.33758115806022,16.2811315666346,10.58001841495,37.1026545538148,12.9063581547208,33.9985666853875,16.1910957491345,22.7421746106684,28.6737207742295,10.8142203501449,16.5317412900716,9.87186817490901,14.1335829804136,5.0703631119605,21.815501160434,48.4129955442627,28.4426681261332,10.3915699685383,13.4280728701802,15.1657333504435,15.4148237620731,42.9836886854305,13.2113503767694,11.7970022200972,9.43842982767638,9.22461989024234,11.7563659631046,15.0513545133702,10.5559936716927,24.9666917411718,22.991297750266,19.4614321428972,16.6619855445831,15.6797478106879,21.819386391085,9.31958806090611,9.36898550436951,6.70229461803056,13.7946809812639,31.511377745057,11.9980546198682,23.2538515543708,8.83764772488454,6.8625090422794,2.51308704225729,9.03886464999838,7.67146371990992,6.64921742590592,6.65189178577806,17.3126918545538,14.8044295026011,10.6143558542143,12.416069497302,7.1566243629487,6.43725892413724,6.66229880279792,8.13806016312861,8.02830689985669,5.89323113310309,8.15205003669641,13.9699820199068,8.191583731448,12.1027891307404,10.9089696981648,10.9597866213787,14.1804097105055,15.6713474934975,19.7550850951626,16.1217756122979,7.72434506044558,12.0953516343916,14.7765019685708,9.32065976409758,10.5536726991493,8.82304101158973,12.7842157216014,11.8058539048442,8.63895832169318,6.51095045301142,10.7309360559848,8.52386999280337,10.0381508447223,11.3275550214576,13.7006288132496,14.0351987928319,12.0752563410078,12.4811969447146,11.3556572224629,3.80747065803352,15.8601015832223,12.9580777665137,9.81125952462076,12.5407802804637,12.7578786708872,13.3111126251406,13.5650606745371,12.935342575654,13.7613427847908,11.3642278759568,12.5667604400135,10.7436494902221,15.0122347081723,16.178749355776,16.4264917904768,13.9398891278057,13.6560888686219,17.8227679671177,22.5415471346161,14.8665469327079,13.5766741017338,14.0271639780637,14.6708766128277,14.7610147979602,13.6588893221996,11.7227305725711,21.6410417773619,15.1829046201646,16.5109555895091,13.2668646307064,15.8230894683032,15.4353382241547,11.7127891819453,14.6725030099913,15.4028465436284,10.4333337011471,11.5014565221884,14.8856379067401,13.7296576170407,15.1547326768267,14.351793081753,17.3679667690812,23.833161531492,9.09558776498327,14.1779529504563,16.2955282344181,13.8467246490216,13.0654880804616,15.2347930167049,23.8063050386515,16.7093252752562,13.730810758224,20.2507556195009,21.3022309130459,18.4772930596508,19.238324791341,21.1107797514981,41.8807376540406,14.2611639175521,17.6599517635029,6.74312477948726,8.08760637486202,10.6557714494839,13.1284882146274,21.4545589203055,23.8167634020949,21.3269163755471,15.0550342710108,11.1399337041197,15.286132662597,17.0020494703456,16.3663280430335,16.602086673754,7.71171159412337,21.4329528664486,11.9303954457061,15.4742611385897,26.5601897985782,26.5490276679926,7.04063844849446,6.95344181018927,9.24164890803901,8.56375489354241,10.7602301780375,11.8877014857382,15.6319503675327,12.1209108650805,15.1697643809192,9.48767477174989,16.5016869197099,18.0432991049508,8.10274923140896,7.24408629183425,8.3591443662321,12.0591358876746,10.7021290561242,13.3284706687718,7.61162372786498,37.3128015821299,29.0209937083434,13.6727606794076,18.1374878235628,18.4069446433332,18.8779455025128,10.504766272276,14.6085400773105,17.7803310344209,9.6421157045465,19.4792804109552,16.0981757011314,16.1119238811649,14.5043711893612,18.4537207423384,15.5569157780435,30.7660958288878,37.7868921273877,31.2331940797998,9.54670618015114,8.85740782027179,13.6224042974989,13.068646239438,12.1271211688392,16.3771922809633,16.7231789517178,13.3898598275044,12.3025292732494,11.0172727298024,19.2615187056947,3.94585057078933,15.4002042425298,13.567596217482,13.8060343724274,10.7202653486517,15.20605129417,13.6134396829075,15.8849349509619,16.0434796971338,9.18019659138823,5.47257011889944,19.9087005995752,11.9607877021197,11.1954943309662,16.2401028722244,16.1124026100733,16.6892338016263,15.385017538556,15.359710826156,16.2555984416518,11.12619377163,12.7040993272419,20.466154955348,18.2802499116626,15.3108741857855,11.1097887971454,26.1943424981396,26.5553015564048,25.1826924546118,17.0006842748328,29.8415135967379,20.1466786693992,21.6512062869857,16.0503073291316,7.90652579663893,6.90487854760765,9.16632821503035,12.5452823110892,6.85082519770642,9.06472676867641,8.10027000278167,9.00642406448441,14.5005570874945,9.31968561153276,4.56664329370377,12.768795948833,9.56108192223151,19.2054306483952,10.6902712940271,10.8467669985508,16.4462578573195,10.0957178047058,15.0832028508153,16.9307131881744,14.1948407938534,15.4673599936582,16.761829837109,14.0855335290712,13.956818956214,20.4806287251722,19.9321040625151,15.4327376370964,15.6592642305257,12.217510371155,11.6575545811041,15.795346748181,12.8755542571553,17.7322628291441,14.5869539643762,16.6690777546603,14.6342378298218,13.9426947062057,12.4939784738193,16.8342681497322,16.4902675192602,17.9278157923526,20.0523211153148,18.43748410113,13.8892759906422,10.7418548513317,17.3109390249602,13.7517474590911,8.41668661102911,11.9119366324538,13.9120701372253
|short_description=p2@Scaf8
}}

Revision as of 14:03, 13 September 2013

Short description:p2@Scaf8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scaf8_5end
Coexpression cluster:NA
Association with transcript: 238bp_to_ENSMUST00000076734, ENSMUST00000082356, ENSMUST00000170698, NM_134123, uc008aei.2, uc008aej.2_5end
EntrezGene:Scaf8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scaf8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E945.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E756.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F260.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F135.34
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E436.81
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.67
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B97.41
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G819.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H231.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.90
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.31
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.45
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I952.95
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A142.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E127.79
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.69
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.52
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D916.28
Mouse Schwann, donor2.CNhs12573.11746-123F910.58
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C434.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.19
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F628.67
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I848.41
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.41
accessory axillary lymph node, adult.CNhs10475.1063-29H942.98
adrenal gland, adult.CNhs10508.49-24D713.21
adrenal gland, embryo E14.CNhs11038.406-44C511.80
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I19.22
adrenal gland, embryo E18.CNhs11026.1262-18F511.76
adrenal gland, neonate N00.CNhs11191.1311-23C115.05
adrenal gland, neonate N25.CNhs11223.1377-27I310.56
amnion, adult pregnant day17.5.CNhs10488.583-22A824.97
aorta, adult.CNhs10498.46-23H122.99
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F516.66
bone (os femoris), neonate N16.CNhs11225.1525-43A615.68
bone (os femoris), neonate N20.CNhs11195.1350-25C321.82
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H713.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C731.51
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.25
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.80
epididymis, adult.CNhs10490.58-23B210.61
eyeball, adult.CNhs10484.31-12G412.42
eyeball, embryo E12.CNhs11016.345-16C67.16
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D48.14
eyeball, neonate N00.CNhs11207.633-15C68.03
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G88.15
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E28.19
forelimb, embryo E12.CNhs10600.359-14H212.10
forelimb, embryo E13.CNhs10589.384-1E210.91
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B519.76
gonad, embryo E13.CNhs11044.1564-45I616.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.78
heart, embryo E11.CNhs10586.331-24E99.32
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I98.82
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C811.81
heart, embryo E16.CNhs11021.457-17C68.64
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I210.04
heart, neonate N10.CNhs11118.749-24G111.33
heart, neonate N16.CNhs11209.782-15G113.70
heart, neonate N20.CNhs11127.821-26I614.04
heart, neonate N25.CNhs11196.1351-25D312.08
heart, neonate N30.CNhs11202.1390-42D212.48
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A312.96
intestine, embryo E12.CNhs11019.1251-16I59.81
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D812.76
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D313.57
intestine, embryo E18.CNhs10526.1289-20F712.94
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F210.74
intestine, neonate N10.CNhs11098.755-23A515.01
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E316.43
intestine, neonate N30.CNhs11131.1384-42G113.94
kidney, embryo E14.CNhs10606.411-4I913.66
kidney, embryo E15.CNhs10997.434-16F817.82
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I214.87
kidney, embryo E18.CNhs11001.1288-20C713.58
kidney, neonate N00.CNhs11214.646-21G714.03
kidney, neonate N10.CNhs11206.758-6D514.67
kidney, neonate N20.CNhs11113.832-19I114.76
kidney, neonate N25.CNhs11122.1353-25F313.66
kidney, neonate N30.CNhs11203.1385-42H111.72
liver, adult pregnant day01.CNhs10466.508-5B221.64
liver, embryo E12.CNhs10601.355-15F815.18
liver, embryo E13.CNhs10524.378-3H616.51
liver, embryo E14.CNhs10594.409-16E113.27
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F515.44
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G414.67
liver, neonate N00.CNhs11117.641-24F415.40
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A315.15
liver, neonate N25.CNhs11198.1368-26H114.35
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B123.83
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F814.18
lung, embryo E15.CNhs11020.432-17C516.30
lung, embryo E16.CNhs10998.458-17B613.85
lung, embryo E17.CNhs10605.480-44A613.07
lung, embryo E18.CNhs10583.1287-20I615.23
lung, neonate N00.CNhs11224.640-42C623.81
lung, neonate N06.CNhs11212.683-20E516.71
lung, neonate N07.CNhs11111.715-19A313.73
lung, neonate N10.CNhs11219.750-23E620.25
lung, neonate N20.CNhs11109.822-18A421.30
lung, neonate N25.CNhs11119.1359-25C718.48
lung, neonate N30.CNhs11133.1394-42H219.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A141.88
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H217.66
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A38.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E223.82
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.33
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.37
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I721.43
ovary, embryo E18.CNhs11040.505-44H711.93
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G626.56
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E59.24
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I710.76
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G818.04
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C77.24
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B912.06
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F513.33
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I737.31
placenta, adult pregnant day17.CNhs10464.577-18G329.02
prostate, adult.CNhs10470.859-1F813.67
skin, adult.CNhs10492.30-1C318.14
skin, neonate N00.CNhs11124.650-25G418.41
skin, neonate N03.CNhs11215.662-22H318.88
skin, neonate N06.CNhs11097.693-20I510.50
skin, neonate N10.CNhs11108.762-6C414.61
small intestine, neonate N16.CNhs11114.790-21I117.78
spinal cord, adult.CNhs10505.24-13C99.64
spleen, adult.CNhs10465.25-2G219.48
spleen, embryo E16.CNhs11035.461-43C116.10
spleen, embryo E18.CNhs11011.1271-21F216.11
spleen, neonate N10.CNhs11116.752-24D114.50
spleen, neonate N20.CNhs11112.824-19H118.45
spleen, neonate N25.CNhs11099.1354-25G315.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D331.23
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E38.86
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D413.07
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B816.72
stomach, neonate N07.CNhs11210.718-18A913.39
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I111.02
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F515.40
testis, embryo E15.CNhs11034.443-27C513.57
testis, embryo E16.CNhs11033.470-26G513.81
testis, embryo E17.CNhs11029.486-18I510.72
testis, embryo E18.CNhs11027.503-18G515.21
testis, neonate N00.CNhs11189.1300-22B713.61
testis, neonate N07.CNhs11222.726-26I415.88
testis, neonate N10.CNhs11204.763-44D916.04
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B519.91
thymus, embryo E14.CNhs11041.402-44I411.96
thymus, embryo E15.CNhs11005.430-45I211.20
thymus, embryo E16.CNhs11002.456-26C516.24
thymus, embryo E17.CNhs10581.478-18C116.11
thymus, embryo E18.CNhs10595.1273-19G416.69
thymus, neonate N02.CNhs11181.1541-43F815.39
thymus, neonate N03.CNhs11137.2104-43C715.36
thymus, neonate N06.CNhs11197.681-26C416.26
thymus, neonate N07.CNhs11211.713-19D311.13
thymus, neonate N10.CNhs11194.748-24E412.70
thymus, neonate N20.CNhs11186.820-7A220.47
thymus, neonate N25.CNhs11125.1362-25G718.28
thymus, neonate N30.CNhs11132.1393-42G215.31
tongue, adult.CNhs10499.32-1B411.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.19
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F726.56
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.18
urinary bladder, adult.CNhs10481.879-12E417.00
uterus, adult pregnant day19.CNhs10497.590-15F529.84
uterus, adult.CNhs10509.92-27E520.15
vagina, adult.CNhs10502.89-27D521.65
vesicular gland, adult.CNhs10491.51-27F816.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I84.57
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H29.56
whole body, embryo E14.5.CNhs10578.420-27D219.21
whole body, embryo E14.CNhs10519.395-14B110.69
whole body, embryo E16.CNhs10514.453-14F210.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.76
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.44
whole body, embryo E17.5.CNhs10513.490-9F913.89
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B317.31
whole body, neonate N00.CNhs10525.657-19C213.75
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B413.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell5.69e-0812
T cell7.65e-0811
pro-T cell7.65e-0811
mature alpha-beta T cell2.84e-079
alpha-beta T cell2.84e-079
immature T cell2.84e-079
mature T cell2.84e-079
immature alpha-beta T cell2.84e-079
lymphocyte6.14e-0713
common lymphoid progenitor6.14e-0713

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure1.51e-0835
foregut1.16e-0780
unilaminar epithelium1.25e-0766
endo-epithelium2.37e-0769







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