FFCP PHASE1:Mm9::chr1:59030156..59030169,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70827|HGNC=|UniProt=G3UZH5|association_with_transcript=103bp_to_ENSMUST00000173590_5end|description=CAGE_peak_4_at_Trak2_5end|id=chr1:59030156..59030169,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!5.11e-09!88;UBERON:0004177!1.07e-07!29;UBERON:0004872!2.30e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.58e-10,87;UBERON:0004177,8.13e-09,29;UBERON:0005057,8.13e-09,29;UBERON:0002193,3.26e-08,48;UBERON:0002405,3.26e-08,48;UBERON:0002390,4.12e-08,45;UBERON:0003061,4.12e-08,45;UBERON:0004872,1.44e-07,33;UBERON:0000077,2.26e-07,35|phase1_expression=0.960893082628764,2.79180326111489,4.54999239389536,0,0.500895729946347,1.6787927191189,2.10251376535973,4.00282302668886,7.180224829735,9.83071010552373,0.856089841127525,2.23362045186942,2.56801094896809,2.18551006047494,5.99597571268193,7.08663435864391,10.4934281719222,2.99689057090326,2.87940310572051,2.54633791078818,0.765389611359628,0.595745707205312,0,0.95995453676044,3.21172993494038,2.8711598205751,3.4460959692726,1.50829862880122,0.570070258369122,0,1.33038306393183,3.17515336729816,2.46025915033828,0,1.1554064790051,0.166234645358492,1.22501613757421,11.3003540298965,5.4693474116666,14.1351410872926,5.88231488031014,12.294818729252,6.79714494243615,0.377690453926732,0.202753862439029,0.917733760808408,0.782391344348039,0,0.219686182734472,0.194429899074283,0.55994568650145,0,3.02008690903925,1.45072428402269,5.71359458542189,1.28629718017973,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,1.21505344498522,0.841299845405528,0.856952953211411,1.10434270475807,1.22490799214954,0.575072826109418,2.75765635983006,0,1.27687338085188,1.0752457327937,0.659431438650969,0.274462930807229,0,0,0.56276261003168,1.5279824777681,0.294628585473668,0.142371680799103,0.372798891650601,1.13589289999776,0.755715601067855,1.73918693221007,0,0.679971333707751,0,0,0,1.40444420131752,1.02258193546835,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,1.37020655662872,2.33044095282455,0.890652834388949,0.693941307064543,0.304465478312141,0.461230994512117,0.452167921657868,1.76383060703557,0.125666591329675,0.494389935468748,1.59059292611903,5.30766331169925,0.970601099684455,3.5334642953663,5.81850303762267,1.86391761218122,2.04946557908083,1.25668024088073,0.510914110417183,2.99537811264801,4.19931911695385,2.41433431438823,0.748953197024114,0.457500602818626,1.63350657746724,2.43354048269187,2.81287003063364,0.41557608911912,4.05603157669394,0.611036183101898,2.98576729464223,1.76905930903572,1.47309299120532,0.390361328888111,0,0,1.05493372485001,1.49680298132921,1.5373646434182,0.749613796477831,3.3631438196072,0.646703978798527,0.189106080167819,0.703804496655795,0.219195732427575,0.556094498451196,1.39300866608867,1.02891068203972,0,3.51106593656617,1.80143534980301,1.42081749697796,2.48550927042602,3.98694301967864,2.70093092191522,2.3674473558521,3.73852040320067,3.39387648352232,3.48800917125612,4.56064782379353,5.7215017759913,5.26591519723137,5.58169377868924,6.4044359541226,6.57899943413995,9.44065495751518,5.90508242545636,0.630869845692382,1.54356918568927,0.660837565967596,0.264450566663544,0.426576501070468,0.928946687441754,0.38660238396628,0,0,1.14135375667535,0,0.329397909448022,0,0.397912944082302,0.58489226135736,1.79763881730844,1.08069024937347,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,2.03651327845314,1.35766741017338,1.26244475802573,2.46622494784603,3.24742325555125,2.82597710114475,1.72756029490521,0,4.50481785433454,6.87956482896211,5.62155280962134,5.47722327748958,3.85883455603867,3.05551022137704,3.74004978686054,5.0261920300261,2.74561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,1.66277871149944,0.37898282354097,0.814824882210129,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,2.34160377429359,2.20689201748667,1.32878813789265,1.2756381492599,1.14704320301017,1.20879487306127,1.3018415272336,0,0,0,0.551873492609465,2.0871576698413,4.92289083687253,0.327869890753351,1.00988370881749,0,0.390438744296638,2.36965737506079,0.955875191810208,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,1.18586333383957,1.92792789853084,0.709700426041343,0,1.14020871547503,0.164970122972535,0,0.485561272309963,0.604647113929502,0.754420319023592,0,0.307435147943927,1.29214146584111,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0.646793418913773,0.857348140126369,0.354680467284547,0,0.329098041204242,0,1.17335854031855,2.75381692122966,0,0.65954501176592,0.807322133479528,0.482503399425247,1.55184047204077,3.28281799490123,0.291480836629851,2.03967832211561,6.1513517087227,1.44470807574256,2.77791791054568,11.3021074202815,11.072232445403,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| ||
|EntrezGene=70827 | |||
|HGNC= | |||
|UniProt=G3UZH5 | |||
|association_with_transcript=103bp_to_ENSMUST00000173590_5end | |||
|description=CAGE_peak_4_at_Trak2_5end | |||
|id=chr1:59030156..59030169,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.11e-09!88;UBERON:0004177!1.07e-07!29;UBERON:0004872!2.30e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.58e-10,87;UBERON:0004177,8.13e-09,29;UBERON:0005057,8.13e-09,29;UBERON:0002193,3.26e-08,48;UBERON:0002405,3.26e-08,48;UBERON:0002390,4.12e-08,45;UBERON:0003061,4.12e-08,45;UBERON:0004872,1.44e-07,33;UBERON:0000077,2.26e-07,35 | |||
|phase1_expression=0.960893082628764,2.79180326111489,4.54999239389536,0,0.500895729946347,1.6787927191189,2.10251376535973,4.00282302668886,7.180224829735,9.83071010552373,0.856089841127525,2.23362045186942,2.56801094896809,2.18551006047494,5.99597571268193,7.08663435864391,10.4934281719222,2.99689057090326,2.87940310572051,2.54633791078818,0.765389611359628,0.595745707205312,0,0.95995453676044,3.21172993494038,2.8711598205751,3.4460959692726,1.50829862880122,0.570070258369122,0,1.33038306393183,3.17515336729816,2.46025915033828,0,1.1554064790051,0.166234645358492,1.22501613757421,11.3003540298965,5.4693474116666,14.1351410872926,5.88231488031014,12.294818729252,6.79714494243615,0.377690453926732,0.202753862439029,0.917733760808408,0.782391344348039,0,0.219686182734472,0.194429899074283,0.55994568650145,0,3.02008690903925,1.45072428402269,5.71359458542189,1.28629718017973,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,1.21505344498522,0.841299845405528,0.856952953211411,1.10434270475807,1.22490799214954,0.575072826109418,2.75765635983006,0,1.27687338085188,1.0752457327937,0.659431438650969,0.274462930807229,0,0,0.56276261003168,1.5279824777681,0.294628585473668,0.142371680799103,0.372798891650601,1.13589289999776,0.755715601067855,1.73918693221007,0,0.679971333707751,0,0,0,1.40444420131752,1.02258193546835,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,1.37020655662872,2.33044095282455,0.890652834388949,0.693941307064543,0.304465478312141,0.461230994512117,0.452167921657868,1.76383060703557,0.125666591329675,0.494389935468748,1.59059292611903,5.30766331169925,0.970601099684455,3.5334642953663,5.81850303762267,1.86391761218122,2.04946557908083,1.25668024088073,0.510914110417183,2.99537811264801,4.19931911695385,2.41433431438823,0.748953197024114,0.457500602818626,1.63350657746724,2.43354048269187,2.81287003063364,0.41557608911912,4.05603157669394,0.611036183101898,2.98576729464223,1.76905930903572,1.47309299120532,0.390361328888111,0,0,1.05493372485001,1.49680298132921,1.5373646434182,0.749613796477831,3.3631438196072,0.646703978798527,0.189106080167819,0.703804496655795,0.219195732427575,0.556094498451196,1.39300866608867,1.02891068203972,0,3.51106593656617,1.80143534980301,1.42081749697796,2.48550927042602,3.98694301967864,2.70093092191522,2.3674473558521,3.73852040320067,3.39387648352232,3.48800917125612,4.56064782379353,5.7215017759913,5.26591519723137,5.58169377868924,6.4044359541226,6.57899943413995,9.44065495751518,5.90508242545636,0.630869845692382,1.54356918568927,0.660837565967596,0.264450566663544,0.426576501070468,0.928946687441754,0.38660238396628,0,0,1.14135375667535,0,0.329397909448022,0,0.397912944082302,0.58489226135736,1.79763881730844,1.08069024937347,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,2.03651327845314,1.35766741017338,1.26244475802573,2.46622494784603,3.24742325555125,2.82597710114475,1.72756029490521,0,4.50481785433454,6.87956482896211,5.62155280962134,5.47722327748958,3.85883455603867,3.05551022137704,3.74004978686054,5.0261920300261,2.74561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,1.66277871149944,0.37898282354097,0.814824882210129,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,2.34160377429359,2.20689201748667,1.32878813789265,1.2756381492599,1.14704320301017,1.20879487306127,1.3018415272336,0,0,0,0.551873492609465,2.0871576698413,4.92289083687253,0.327869890753351,1.00988370881749,0,0.390438744296638,2.36965737506079,0.955875191810208,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,1.18586333383957,1.92792789853084,0.709700426041343,0,1.14020871547503,0.164970122972535,0,0.485561272309963,0.604647113929502,0.754420319023592,0,0.307435147943927,1.29214146584111,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0.646793418913773,0.857348140126369,0.354680467284547,0,0.329098041204242,0,1.17335854031855,2.75381692122966,0,0.65954501176592,0.807322133479528,0.482503399425247,1.55184047204077,3.28281799490123,0.291480836629851,2.03967832211561,6.1513517087227,1.44470807574256,2.77791791054568,11.3021074202815,11.072232445403,6.40578884978263,3.56954702987096,5.45810664062266,4.69879910935041,1.90934123603023,0.474503990371703,0.813277868507395,0.648032044930808,0.836353184057875,0.436725127492355,1.21377911746339,1.23980183588004,2.09404753587224,1.16653475962614,0,0.56369293868419,0.897099276263873,0.165458490457098,0.583353565032143,0.774958940866387,0.168956125490778,0.469428954583016,0.5208175393758,0.838874755405687,0.241584120826006,0.864090018773596,6.95224465381992,0.810900861160657,1.84879722896689,2.46849563657811,1.61124026100733,4.76835251475036,5.4087952283986,6.35064966850682,6.66378569657774,8.00171469877498,7.36031151498936,6.91950953252242,6.34998154826174,7.94762934834669,2.494034219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| |||
|short_description=p4@Trak2 | |||
}} | |||
Revision as of 20:36, 13 September 2013
| Short description: | p4@Trak2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Trak2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 103bp_to_ENSMUST00000173590_5end |
| EntrezGene: | Trak2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 1.58e-10 | 87 |
| hemopoietic organ | 8.13e-09 | 29 |
| immune organ | 8.13e-09 | 29 |
| hemolymphoid system | 3.26e-08 | 48 |
| immune system | 3.26e-08 | 48 |
| hematopoietic system | 4.12e-08 | 45 |
| blood island | 4.12e-08 | 45 |
| splanchnic layer of lateral plate mesoderm | 1.44e-07 | 33 |
| mixed endoderm/mesoderm-derived structure | 2.26e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
