FFCP PHASE1:Mm9::chr6:124711353..124711365,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:124711353..124711365,-|id=chr6:124711353..124711365,-|ontology_enrichment_celltype=CL:0000055!8.90e-13!50;CL:0002319!1.57e-12!43;CL:0000393!2.04e-12!39;CL:0000211!2.04e-12!39;CL:0000221!4.57e-12!44;CL:0000133!4.57e-12!44;CL:0000540!7.01e-12!33;CL:0000047!7.01e-12!33;CL:0000031!7.01e-12!33;CL:0000404!7.01e-12!33;CL:0000117!4.95e-11!23;CL:0000337!4.95e-11!23;CL:0002321!8.22e-07!70;CL:0000220!8.22e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-11,23;CL:0000337,1.48e-11,23;CL:0002614,2.69e-10,3;CL:0002610,1.14e-09,3;CL:0000540,1.76e-07,33;CL:0000047,1.76e-07,33;CL:0000031,1.76e-07,33;CL:0000404,1.76e-07,33;CL:0002611,3.27e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.17e-31!75;UBERON:0001016!2.17e-31!75;UBERON:0001017!8.22e-30!73;UBERON:0005743!8.22e-30!73;UBERON:0004121!2.15e-27!102;UBERON:0000924!2.15e-27!102;UBERON:0006601!2.15e-27!102;UBERON:0001049!9.43e-26!52;UBERON:0005068!9.43e-26!52;UBERON:0006241!9.43e-26!52;UBERON:0007135!9.43e-26!52;UBERON:0002346!1.04e-24!71;UBERON:0003075!1.04e-24!71;UBERON:0007284!1.04e-24!71;UBERON:0000955!6.91e-24!50;UBERON:0006238!6.91e-24!50;UBERON:0002020!9.45e-24!34;UBERON:0002616!7.12e-23!49;UBERON:0000033!2.73e-22!63;UBERON:0002791!2.19e-18!29;UBERON:0003528!2.19e-18!29;UBERON:0001893!2.19e-18!29;UBERON:0003056!2.02e-16!49;UBERON:0007811!3.07e-16!86;UBERON:0003080!1.56e-15!40;UBERON:0000153!1.04e-14!94;UBERON:0002780!1.34e-14!39;UBERON:0001890!1.34e-14!39;UBERON:0006240!1.34e-14!39;UBERON:0002021!1.08e-13!10;UBERON:0000411!1.08e-13!10;UBERON:0001950!1.08e-13!10;UBERON:0002619!8.86e-13!17;UBERON:0000956!1.90e-12!21;UBERON:0001869!1.90e-12!21;UBERON:0000203!1.90e-12!21;UBERON:0003076!1.32e-11!12;UBERON:0003057!1.32e-11!12;UBERON:0002298!1.65e-08!6;UBERON:0000025!6.45e-08!114;UBERON:0002240!7.10e-08!6;UBERON:0005174!7.10e-08!6;UBERON:0001137!7.10e-08!6;UBERON:0002420!3.12e-07!8;UBERON:0007245!3.12e-07!8;UBERON:0010009!3.12e-07!8;UBERON:0010011!3.12e-07!8;UBERON:0000454!3.12e-07!8;UBERON:0001948!7.82e-07!5;UBERON:0002315!7.82e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-35,54;UBERON:0001049,4.69e-31,52;UBERON:0005068,4.69e-31,52;UBERON:0006241,4.69e-31,52;UBERON:0007135,4.69e-31,52;UBERON:0001017,3.41e-29,73;UBERON:0002021,3.88e-29,10;UBERON:0000411,3.88e-29,10;UBERON:0001950,3.88e-29,10;UBERON:0001016,2.84e-28,75;UBERON:0002020,1.86e-25,34;UBERON:0002346,2.74e-24,64;UBERON:0003075,2.74e-24,64;UBERON:0007284,2.74e-24,64;UBERON:0000955,1.33e-23,47;UBERON:0006238,1.33e-23,47;UBERON:0002616,7.27e-22,46;UBERON:0004121,3.46e-21,95;UBERON:0000924,3.46e-21,95;UBERON:0006601,3.46e-21,95;UBERON:0010371,1.14e-20,73;UBERON:0003528,6.11e-18,29;UBERON:0002791,6.11e-18,29;UBERON:0001893,6.11e-18,29;UBERON:0003076,9.29e-18,12;UBERON:0003057,9.29e-18,12;UBERON:0002619,2.40e-16,17;UBERON:0003080,3.35e-16,40;UBERON:0010314,2.40e-15,92;UBERON:0002780,1.30e-14,39;UBERON:0001890,1.30e-14,39;UBERON:0006240,1.30e-14,39;UBERON:0000956,7.26e-13,21;UBERON:0001869,7.26e-13,21;UBERON:0000203,7.26e-13,21;UBERON:0002950,1.11e-12,4;UBERON:0001891,1.11e-12,4;UBERON:0009616,1.11e-12,4;UBERON:0010286,1.11e-12,4;UBERON:0003056,1.39e-12,49;UBERON:0002240,3.92e-12,6;UBERON:0005174,3.92e-12,6;UBERON:0001137,3.92e-12,6;UBERON:0000025,2.16e-11,114;UBERON:0004111,2.63e-10,122;UBERON:0002038,2.69e-10,3;UBERON:0009663,2.69e-10,3;UBERON:0009661,2.69e-10,3;UBERON:0000125,2.69e-10,3;UBERON:0002308,2.69e-10,3;UBERON:0001948,7.93e-10,5;UBERON:0002315,7.93e-10,5;UBERON:0004684,1.14e-09,3;UBERON:0002275,1.14e-09,3;UBERON:0011216,1.62e-07,194;UBERON:0004733,1.84e-07,6;UBERON:0004732,1.84e-07,6;UBERON:0002028,1.84e-07,6;UBERON:0007277,1.84e-07,6;UBERON:0002256,3.27e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,3.42781181284564,3.97563373712904,0,0.287536413054709,0,2.20231761998777,5.49055553766307,3.07213066512487,0.263772575460388,0.548925861614458,0,11.1673199600552,6.19038871034848,3.0559649555362,2.06240009831567,3.13217697758026,0.186399445825301,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,2.93225389538837,0,0,0,0,2.09706895166752,1.83000241127451,0.125654352112864,0.695297280769106,1.27857728665165,3.32460871295296,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:124711353..124711365,- | |||
|id=chr6:124711353..124711365,- | |||
|ontology_enrichment_celltype=CL:0000055!8.90e-13!50;CL:0002319!1.57e-12!43;CL:0000393!2.04e-12!39;CL:0000211!2.04e-12!39;CL:0000221!4.57e-12!44;CL:0000133!4.57e-12!44;CL:0000540!7.01e-12!33;CL:0000047!7.01e-12!33;CL:0000031!7.01e-12!33;CL:0000404!7.01e-12!33;CL:0000117!4.95e-11!23;CL:0000337!4.95e-11!23;CL:0002321!8.22e-07!70;CL:0000220!8.22e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-11,23;CL:0000337,1.48e-11,23;CL:0002614,2.69e-10,3;CL:0002610,1.14e-09,3;CL:0000540,1.76e-07,33;CL:0000047,1.76e-07,33;CL:0000031,1.76e-07,33;CL:0000404,1.76e-07,33;CL:0002611,3.27e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.17e-31!75;UBERON:0001016!2.17e-31!75;UBERON:0001017!8.22e-30!73;UBERON:0005743!8.22e-30!73;UBERON:0004121!2.15e-27!102;UBERON:0000924!2.15e-27!102;UBERON:0006601!2.15e-27!102;UBERON:0001049!9.43e-26!52;UBERON:0005068!9.43e-26!52;UBERON:0006241!9.43e-26!52;UBERON:0007135!9.43e-26!52;UBERON:0002346!1.04e-24!71;UBERON:0003075!1.04e-24!71;UBERON:0007284!1.04e-24!71;UBERON:0000955!6.91e-24!50;UBERON:0006238!6.91e-24!50;UBERON:0002020!9.45e-24!34;UBERON:0002616!7.12e-23!49;UBERON:0000033!2.73e-22!63;UBERON:0002791!2.19e-18!29;UBERON:0003528!2.19e-18!29;UBERON:0001893!2.19e-18!29;UBERON:0003056!2.02e-16!49;UBERON:0007811!3.07e-16!86;UBERON:0003080!1.56e-15!40;UBERON:0000153!1.04e-14!94;UBERON:0002780!1.34e-14!39;UBERON:0001890!1.34e-14!39;UBERON:0006240!1.34e-14!39;UBERON:0002021!1.08e-13!10;UBERON:0000411!1.08e-13!10;UBERON:0001950!1.08e-13!10;UBERON:0002619!8.86e-13!17;UBERON:0000956!1.90e-12!21;UBERON:0001869!1.90e-12!21;UBERON:0000203!1.90e-12!21;UBERON:0003076!1.32e-11!12;UBERON:0003057!1.32e-11!12;UBERON:0002298!1.65e-08!6;UBERON:0000025!6.45e-08!114;UBERON:0002240!7.10e-08!6;UBERON:0005174!7.10e-08!6;UBERON:0001137!7.10e-08!6;UBERON:0002420!3.12e-07!8;UBERON:0007245!3.12e-07!8;UBERON:0010009!3.12e-07!8;UBERON:0010011!3.12e-07!8;UBERON:0000454!3.12e-07!8;UBERON:0001948!7.82e-07!5;UBERON:0002315!7.82e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-35,54;UBERON:0001049,4.69e-31,52;UBERON:0005068,4.69e-31,52;UBERON:0006241,4.69e-31,52;UBERON:0007135,4.69e-31,52;UBERON:0001017,3.41e-29,73;UBERON:0002021,3.88e-29,10;UBERON:0000411,3.88e-29,10;UBERON:0001950,3.88e-29,10;UBERON:0001016,2.84e-28,75;UBERON:0002020,1.86e-25,34;UBERON:0002346,2.74e-24,64;UBERON:0003075,2.74e-24,64;UBERON:0007284,2.74e-24,64;UBERON:0000955,1.33e-23,47;UBERON:0006238,1.33e-23,47;UBERON:0002616,7.27e-22,46;UBERON:0004121,3.46e-21,95;UBERON:0000924,3.46e-21,95;UBERON:0006601,3.46e-21,95;UBERON:0010371,1.14e-20,73;UBERON:0003528,6.11e-18,29;UBERON:0002791,6.11e-18,29;UBERON:0001893,6.11e-18,29;UBERON:0003076,9.29e-18,12;UBERON:0003057,9.29e-18,12;UBERON:0002619,2.40e-16,17;UBERON:0003080,3.35e-16,40;UBERON:0010314,2.40e-15,92;UBERON:0002780,1.30e-14,39;UBERON:0001890,1.30e-14,39;UBERON:0006240,1.30e-14,39;UBERON:0000956,7.26e-13,21;UBERON:0001869,7.26e-13,21;UBERON:0000203,7.26e-13,21;UBERON:0002950,1.11e-12,4;UBERON:0001891,1.11e-12,4;UBERON:0009616,1.11e-12,4;UBERON:0010286,1.11e-12,4;UBERON:0003056,1.39e-12,49;UBERON:0002240,3.92e-12,6;UBERON:0005174,3.92e-12,6;UBERON:0001137,3.92e-12,6;UBERON:0000025,2.16e-11,114;UBERON:0004111,2.63e-10,122;UBERON:0002038,2.69e-10,3;UBERON:0009663,2.69e-10,3;UBERON:0009661,2.69e-10,3;UBERON:0000125,2.69e-10,3;UBERON:0002308,2.69e-10,3;UBERON:0001948,7.93e-10,5;UBERON:0002315,7.93e-10,5;UBERON:0004684,1.14e-09,3;UBERON:0002275,1.14e-09,3;UBERON:0011216,1.62e-07,194;UBERON:0004733,1.84e-07,6;UBERON:0004732,1.84e-07,6;UBERON:0002028,1.84e-07,6;UBERON:0007277,1.84e-07,6;UBERON:0002256,3.27e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,3.42781181284564,3.97563373712904,0,0.287536413054709,0,2.20231761998777,5.49055553766307,3.07213066512487,0.263772575460388,0.548925861614458,0,11.1673199600552,6.19038871034848,3.0559649555362,2.06240009831567,3.13217697758026,0.186399445825301,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,2.93225389538837,0,0,0,0,2.09706895166752,1.83000241127451,0.125654352112864,0.695297280769106,1.27857728665165,3.32460871295296,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,2.24770825982909,1.40654023910644,0,0,0,0,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0.790575555893047,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,3.95326289831947,4.14292712856459,2.29158205375759,2.40594455281163,2.74033007908257,3.7769694869485,2.70009000092722,5.40385443869065,4.98456649882625,6.73088405277366,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr6:124711353..124711365,- | |||
}} |
Revision as of 08:50, 14 September 2013
Short description: | p@chr6:124711353..124711365, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:124711353..124711365, - |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.48e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.48e-11 | 23 |
neuron of the substantia nigra | 2.69e-10 | 3 |
raphe nuclei neuron | 1.14e-09 | 3 |
neuron | 1.76e-07 | 33 |
neuronal stem cell | 1.76e-07 | 33 |
neuroblast | 1.76e-07 | 33 |
electrically signaling cell | 1.76e-07 | 33 |
neuron of the dorsal spinal cord | 3.27e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.