FFCP PHASE1:Mm9::chr1:71639695..71639711,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=5|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:71639695..71639711,-|id=chr1:71639695..71639711,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,3.96e-09,6;CL:0000187,3.96e-09,6;CL:0000056,3.96e-09,6;CL:0002293,2.97e-08,3;CL:0000222,9.09e-08,7;CL:0002092,9.93e-08,3;CL:0002540,9.93e-08,3;CL:0000192,7.25e-07,3;CL:0000359,7.25e-07,3;CL:0002539,7.25e-07,3;CL:0000514,7.25e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.35e-08!193;UBERON:0004120!1.35e-08!193;UBERON:0006603!1.35e-08!193;UBERON:0003914!1.88e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.27e-10,47;UBERON:0005256,2.12e-09,45;UBERON:0002107,7.01e-09,22;UBERON:0007499,7.01e-09,22;UBERON:0006925,7.01e-09,22;UBERON:0009497,7.01e-09,22;UBERON:0000015,7.01e-09,22;UBERON:0002423,7.01e-09,22;UBERON:0006235,7.01e-09,22;UBERON:0008835,7.01e-09,22;UBERON:0003894,7.01e-09,22;UBERON:0004161,7.01e-09,22;UBERON:0008836,7.01e-09,22;UBERON:0009854,2.11e-08,23;UBERON:0009856,2.11e-08,23;UBERON:0000490,3.32e-08,66;UBERON:0002365,1.46e-07,25;UBERON:0002330,1.46e-07,25;UBERON:0003104,6.20e-07,61;UBERON:0009142,6.20e-07,61;UBERON:0001135,7.25e-07,3;UBERON:0004237,7.25e-07,3;UBERON:0004695,7.25e-07,3;UBERON:0002111,7.25e-07,3;UBERON:0004178,7.25e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.38486499773135,1.21652317463417,2.0190142737785,1.56478268869608,0.218025156380447,1.09843091367236,0.58328969722285,0.55994568650145,0,0,0,0,0.771778308107841,2.29226751951005,3.6097046459421,0,0,0,0,0.889294796111139,1.7997994345628,4.94433181283487,2.1314403448383,2.09720077362883,0.768436610643109,0,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,1.61910957491345,5.19821133958135,0,0.140444420131752,1.1930122580464,1.03914401841148,0.35333957451034,0,5.13305909657271,2.54805239706646,7.11066703153331,0.432982082022428,1.26679932737549,0,0.91347103775248,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0,3.46072954828123,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,1.93950101254089,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.81471491080253,0.124406970610093,0,0,0.260240885925407,0,0.540186389416048,0.30140963567143,0.204109497453984,0.512454881139399,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,1.39300866608867,0.823128545631774,0,0,0,0,1.03562886267751,0.234526059981096,1.80062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.985004784474571,0.0810688095458557,0,0.878200461164203,0.134206418760372,0,0,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0,0,0,0.474529061544512,0,0.754005626400808,0,0.38992817423824,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0.969762435838129,0.350679099451593,0.252946148497029,0,0,0.123397163921801,1.77871576252289,0.166845105716094,0,0.224862112384854,0,0.964708639009667,0.50925170356284,0.863088412352432,1.78348749452539,4.11842119782122,76.1971494594979,4.09355042435354,4.99260276983297,2.27320990152401,1.61457672169721,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.509235257325564,1.40814148973101,0.670025029767263,1.19021820443007,0.975668239288994,0.788175720530955,1.32878813789265,0.478364305972461,0.81931657357869,1.03610989119537,0.433947175744535,0,0,0,0,0,0.117211686592203,1.3114795630134,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.977321756121456,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0,4.66030555900404,0,0,0.161464426695906,0.301564624640779,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,1.25452977608681,0.655087691238533,0.674321731924103,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,1.01362607645082,0.513554785824136,0.649604114888975,0.358053391334963,0,0.360586348559907,0.147689527174577,0.100966449948148,0,0.201652370273681,0,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,1.35232715822533,0.750729901804728,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0,0,0.25347929989024,0.3772526827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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:71639695..71639711,- | |||
|id=chr1:71639695..71639711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.96e-09,6;CL:0000187,3.96e-09,6;CL:0000056,3.96e-09,6;CL:0002293,2.97e-08,3;CL:0000222,9.09e-08,7;CL:0002092,9.93e-08,3;CL:0002540,9.93e-08,3;CL:0000192,7.25e-07,3;CL:0000359,7.25e-07,3;CL:0002539,7.25e-07,3;CL:0000514,7.25e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.35e-08!193;UBERON:0004120!1.35e-08!193;UBERON:0006603!1.35e-08!193;UBERON:0003914!1.88e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.27e-10,47;UBERON:0005256,2.12e-09,45;UBERON:0002107,7.01e-09,22;UBERON:0007499,7.01e-09,22;UBERON:0006925,7.01e-09,22;UBERON:0009497,7.01e-09,22;UBERON:0000015,7.01e-09,22;UBERON:0002423,7.01e-09,22;UBERON:0006235,7.01e-09,22;UBERON:0008835,7.01e-09,22;UBERON:0003894,7.01e-09,22;UBERON:0004161,7.01e-09,22;UBERON:0008836,7.01e-09,22;UBERON:0009854,2.11e-08,23;UBERON:0009856,2.11e-08,23;UBERON:0000490,3.32e-08,66;UBERON:0002365,1.46e-07,25;UBERON:0002330,1.46e-07,25;UBERON:0003104,6.20e-07,61;UBERON:0009142,6.20e-07,61;UBERON:0001135,7.25e-07,3;UBERON:0004237,7.25e-07,3;UBERON:0004695,7.25e-07,3;UBERON:0002111,7.25e-07,3;UBERON:0004178,7.25e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.38486499773135,1.21652317463417,2.0190142737785,1.56478268869608,0.218025156380447,1.09843091367236,0.58328969722285,0.55994568650145,0,0,0,0,0.771778308107841,2.29226751951005,3.6097046459421,0,0,0,0,0.889294796111139,1.7997994345628,4.94433181283487,2.1314403448383,2.09720077362883,0.768436610643109,0,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,1.61910957491345,5.19821133958135,0,0.140444420131752,1.1930122580464,1.03914401841148,0.35333957451034,0,5.13305909657271,2.54805239706646,7.11066703153331,0.432982082022428,1.26679932737549,0,0.91347103775248,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0,3.46072954828123,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,1.93950101254089,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.81471491080253,0.124406970610093,0,0,0.260240885925407,0,0.540186389416048,0.30140963567143,0.204109497453984,0.512454881139399,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,1.39300866608867,0.823128545631774,0,0,0,0,1.03562886267751,0.234526059981096,1.80062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.985004784474571,0.0810688095458557,0,0.878200461164203,0.134206418760372,0,0,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0,0,0,0.474529061544512,0,0.754005626400808,0,0.38992817423824,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0.969762435838129,0.350679099451593,0.252946148497029,0,0,0.123397163921801,1.77871576252289,0.166845105716094,0,0.224862112384854,0,0.964708639009667,0.50925170356284,0.863088412352432,1.78348749452539,4.11842119782122,76.1971494594979,4.09355042435354,4.99260276983297,2.27320990152401,1.61457672169721,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.509235257325564,1.40814148973101,0.670025029767263,1.19021820443007,0.975668239288994,0.788175720530955,1.32878813789265,0.478364305972461,0.81931657357869,1.03610989119537,0.433947175744535,0,0,0,0,0,0.117211686592203,1.3114795630134,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.977321756121456,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0,4.66030555900404,0,0,0.161464426695906,0.301564624640779,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,1.25452977608681,0.655087691238533,0.674321731924103,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,1.01362607645082,0.513554785824136,0.649604114888975,0.358053391334963,0,0.360586348559907,0.147689527174577,0.100966449948148,0,0.201652370273681,0,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,1.35232715822533,0.750729901804728,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.561849044819294,0.192075457214608,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.282328141245992,0.592302255241736,0.548783918618318,0,0.679020569229309,1.68342681497322,0.711810108745045,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0.499621155875892,0.935726433781634,0.429742108096597,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr1:71639695..71639711,- | |||
}} |
Revision as of 20:49, 13 September 2013
Short description: | p@chr1:71639695..71639711, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:71639695..71639711, - |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.96e-09 | 6 |
muscle cell | 3.96e-09 | 6 |
myoblast | 3.96e-09 | 6 |
epithelial cell of thymus | 2.97e-08 | 3 |
mesodermal cell | 9.09e-08 | 7 |
bone marrow cell | 9.93e-08 | 3 |
mesenchymal stem cell of the bone marrow | 9.93e-08 | 3 |
smooth muscle cell | 7.25e-07 | 3 |
vascular associated smooth muscle cell | 7.25e-07 | 3 |
aortic smooth muscle cell | 7.25e-07 | 3 |
smooth muscle myoblast | 7.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 4.27e-10 | 47 |
trunk mesenchyme | 2.12e-09 | 45 |
liver | 7.01e-09 | 22 |
epithelial sac | 7.01e-09 | 22 |
digestive gland | 7.01e-09 | 22 |
epithelium of foregut-midgut junction | 7.01e-09 | 22 |
anatomical boundary | 7.01e-09 | 22 |
hepatobiliary system | 7.01e-09 | 22 |
foregut-midgut junction | 7.01e-09 | 22 |
hepatic diverticulum | 7.01e-09 | 22 |
liver primordium | 7.01e-09 | 22 |
septum transversum | 7.01e-09 | 22 |
liver bud | 7.01e-09 | 22 |
digestive tract diverticulum | 2.11e-08 | 23 |
sac | 2.11e-08 | 23 |
unilaminar epithelium | 3.32e-08 | 66 |
exocrine gland | 1.46e-07 | 25 |
exocrine system | 1.46e-07 | 25 |
mesenchyme | 6.20e-07 | 61 |
entire embryonic mesenchyme | 6.20e-07 | 61 |
smooth muscle tissue | 7.25e-07 | 3 |
blood vessel smooth muscle | 7.25e-07 | 3 |
arterial system smooth muscle | 7.25e-07 | 3 |
artery smooth muscle tissue | 7.25e-07 | 3 |
aorta smooth muscle tissue | 7.25e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.