FFCP PHASE1:Mm9::chr2:102701761..102701783,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:102701761..102701783,-|id=chr2:102701761..102701783,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,4.92e-14,7;CL:0002194,1.24e-11,4;CL:0000766,1.24e-11,4;CL:0000234,1.24e-11,4;CL:0000576,1.24e-11,4;CL:0000235,1.24e-11,4;CL:0000864,1.24e-11,4;CL:0002009,1.24e-11,4;CL:0000040,1.24e-11,4;CL:0000559,1.24e-11,4;CL:0000049,1.23e-10,19;CL:0000219,3.52e-10,54;CL:0000068,8.14e-10,3;CL:0002202,8.14e-10,3;CL:0000069,8.14e-10,3;CL:0002632,8.14e-10,3;CL:0002368,8.14e-10,3;CL:0000307,8.14e-10,3;CL:0000377,8.14e-10,3;CL:0002092,1.48e-09,3;CL:0002540,1.48e-09,3;CL:0000333,1.97e-09,10;CL:0000095,1.97e-09,10;CL:0000243,1.97e-09,10;CL:0000123,1.97e-09,10;CL:0000125,1.97e-09,10;CL:0000030,1.97e-09,10;CL:0000339,1.97e-09,10;CL:0000763,1.10e-07,16;CL:0002476,4.13e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!5.60e-09!32;UBERON:0002371!1.78e-08!16|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.99e-16,16;UBERON:0002204,1.61e-14,32;UBERON:0001474,3.81e-11,22;UBERON:0004765,3.81e-11,22;UBERON:0001434,3.81e-11,22;UBERON:0003126,8.14e-10,3;UBERON:0001005,8.14e-10,3;UBERON:0007196,8.14e-10,3;UBERON:0001558,8.14e-10,3|phase1_expression=0,0,0,0,0,0,0.700837921786577,0.387369970324729,0.563154888606667,0.468129052643987,0,0.239316476986009,0,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0.548457734422955,0.84877930359606,0,0.397163804803541,0.261199789138935,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,5.02237956884289,3.1253413780952,0.523523743973798,2.35292595212406,4.09827290975067,1.45653105909346,1.1330713617802,0.506884656097573,0.734187008646726,0,0.872100625521786,1.31811709640683,2.3331587888914,0.699932108126813,0,0,0,0,1.02903774414379,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,2.2497492932035,1.97773272513395,3.5524005747305,1.19840044207362,1.53687322128622,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,2.49896437999507,1.88928900266964,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,2.16491041011214,3.54703811665138,3.0331466700887,0.11418387971906,1.29468941823586,0,0,0,0,0.301445281105245,0,0,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0,0,0,3.83408398418945,0,2.03312363316904,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.834141747676794,0,0.411564272815887,0,2.1066395619397,0.772043721344145,1.42081749697796,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0,0,0,0,0.264450566663544,0,0,0.38660238396628,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0,0.664394068946325,0.159454768657487,0.655453258862952,0.172684981865896,0.144649058581512,3.01582567878545,2.71952841909355,0,0,0,0,0.491804836130026,0,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,0.876767573733936,0.790575555893047,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,1.61464426695906,0.361877549568935,0.238744688006273,0.820704498725306,0.291480836629851,0,0.512612642393558,0,0.370389054739423,0.753473828018764,0.546776910884101,0.686334519619568,0.679913719975421,2.51912614182584,1.93479963326193,0,0,0.203319467126849,0.432021363287205,0,0.87345025498471,0.134864346384821,0.495920734352016,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.280924522409647,0.320125762024346,0,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,1.22769312950907,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0|short_description=p@chr2:102701761..102701783,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:102701761..102701783,- | |||
|id=chr2:102701761..102701783,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.92e-14,7;CL:0002194,1.24e-11,4;CL:0000766,1.24e-11,4;CL:0000234,1.24e-11,4;CL:0000576,1.24e-11,4;CL:0000235,1.24e-11,4;CL:0000864,1.24e-11,4;CL:0002009,1.24e-11,4;CL:0000040,1.24e-11,4;CL:0000559,1.24e-11,4;CL:0000049,1.23e-10,19;CL:0000219,3.52e-10,54;CL:0000068,8.14e-10,3;CL:0002202,8.14e-10,3;CL:0000069,8.14e-10,3;CL:0002632,8.14e-10,3;CL:0002368,8.14e-10,3;CL:0000307,8.14e-10,3;CL:0000377,8.14e-10,3;CL:0002092,1.48e-09,3;CL:0002540,1.48e-09,3;CL:0000333,1.97e-09,10;CL:0000095,1.97e-09,10;CL:0000243,1.97e-09,10;CL:0000123,1.97e-09,10;CL:0000125,1.97e-09,10;CL:0000030,1.97e-09,10;CL:0000339,1.97e-09,10;CL:0000763,1.10e-07,16;CL:0002476,4.13e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.60e-09!32;UBERON:0002371!1.78e-08!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.99e-16,16;UBERON:0002204,1.61e-14,32;UBERON:0001474,3.81e-11,22;UBERON:0004765,3.81e-11,22;UBERON:0001434,3.81e-11,22;UBERON:0003126,8.14e-10,3;UBERON:0001005,8.14e-10,3;UBERON:0007196,8.14e-10,3;UBERON:0001558,8.14e-10,3 | |||
|phase1_expression=0,0,0,0,0,0,0.700837921786577,0.387369970324729,0.563154888606667,0.468129052643987,0,0.239316476986009,0,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0.548457734422955,0.84877930359606,0,0.397163804803541,0.261199789138935,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,5.02237956884289,3.1253413780952,0.523523743973798,2.35292595212406,4.09827290975067,1.45653105909346,1.1330713617802,0.506884656097573,0.734187008646726,0,0.872100625521786,1.31811709640683,2.3331587888914,0.699932108126813,0,0,0,0,1.02903774414379,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,2.2497492932035,1.97773272513395,3.5524005747305,1.19840044207362,1.53687322128622,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,2.49896437999507,1.88928900266964,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,2.16491041011214,3.54703811665138,3.0331466700887,0.11418387971906,1.29468941823586,0,0,0,0,0.301445281105245,0,0,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0,0,0,3.83408398418945,0,2.03312363316904,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.834141747676794,0,0.411564272815887,0,2.1066395619397,0.772043721344145,1.42081749697796,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0,0,0,0,0.264450566663544,0,0,0.38660238396628,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0,0.664394068946325,0.159454768657487,0.655453258862952,0.172684981865896,0.144649058581512,3.01582567878545,2.71952841909355,0,0,0,0,0.491804836130026,0,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,0.876767573733936,0.790575555893047,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,1.61464426695906,0.361877549568935,0.238744688006273,0.820704498725306,0.291480836629851,0,0.512612642393558,0,0.370389054739423,0.753473828018764,0.546776910884101,0.686334519619568,0.679913719975421,2.51912614182584,1.93479963326193,0,0,0.203319467126849,0.432021363287205,0,0.87345025498471,0.134864346384821,0.495920734352016,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.280924522409647,0.320125762024346,0,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,1.22769312950907,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr2:102701761..102701783,- | |||
}} |
Revision as of 21:28, 13 September 2013
Short description: | p@chr2:102701761..102701783, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:102701761..102701783, - |
Coexpression cluster: | MCL_coexpression_mm9:1105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.92e-14 | 7 |
monopoietic cell | 1.24e-11 | 4 |
myeloid leukocyte | 1.24e-11 | 4 |
phagocyte | 1.24e-11 | 4 |
monocyte | 1.24e-11 | 4 |
macrophage | 1.24e-11 | 4 |
tissue-resident macrophage | 1.24e-11 | 4 |
macrophage dendritic cell progenitor | 1.24e-11 | 4 |
monoblast | 1.24e-11 | 4 |
promonocyte | 1.24e-11 | 4 |
common myeloid progenitor | 1.23e-10 | 19 |
motile cell | 3.52e-10 | 54 |
duct epithelial cell | 8.14e-10 | 3 |
epithelial cell of tracheobronchial tree | 8.14e-10 | 3 |
branched duct epithelial cell | 8.14e-10 | 3 |
epithelial cell of lower respiratory tract | 8.14e-10 | 3 |
respiratory epithelial cell | 8.14e-10 | 3 |
tracheal epithelial cell | 8.14e-10 | 3 |
tracheoblast | 8.14e-10 | 3 |
bone marrow cell | 1.48e-09 | 3 |
mesenchymal stem cell of the bone marrow | 1.48e-09 | 3 |
migratory neural crest cell | 1.97e-09 | 10 |
neuron associated cell | 1.97e-09 | 10 |
glial cell (sensu Vertebrata) | 1.97e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.97e-09 | 10 |
glial cell | 1.97e-09 | 10 |
glioblast | 1.97e-09 | 10 |
glioblast (sensu Vertebrata) | 1.97e-09 | 10 |
myeloid cell | 1.10e-07 | 16 |
bone marrow macrophage | 4.13e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.99e-16 | 16 |
musculoskeletal system | 1.61e-14 | 32 |
bone element | 3.81e-11 | 22 |
skeletal element | 3.81e-11 | 22 |
skeletal system | 3.81e-11 | 22 |
trachea | 8.14e-10 | 3 |
respiratory airway | 8.14e-10 | 3 |
tracheobronchial tree | 8.14e-10 | 3 |
lower respiratory tract | 8.14e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.