FFCP PHASE1:Mm9::chr5:124897018..124897027,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67956|HGNC=|MCL_coexpression_id=2028|UniProt=|association_with_transcript=4bp_to_ENSMUST00000147692_5end|description=CAGE_peak_27_at_Setd8_5end|id=chr5:124897018..124897027,+|ontology_enrichment_celltype=CL:0000349!1.35e-07!3;CL:0000351!1.35e-07!3|ontology_enrichment_celltype_v019_2=CL:0000349,9.96e-21,3;CL:0000351,9.96e-21,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003975!6.75e-11!5;UBERON:0005795!2.07e-09!4;UBERON:0000995!2.07e-09!4;UBERON:0004175!6.97e-08!9;UBERON:0000358!1.35e-07!3;UBERON:0000307!1.35e-07!3;UBERON:0005631!1.49e-07!3;UBERON:0000478!1.49e-07!3;UBERON:0000158!1.49e-07!3;UBERON:0000945!6.21e-07!16;UBERON:0010039!6.21e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.96e-21,3;UBERON:0000307,9.96e-21,3;UBERON:0007010,9.96e-21,3;UBERON:0001987,6.53e-15,2;UBERON:0003124,6.53e-15,2;UBERON:0004340,6.53e-15,2;UBERON:0005631,2.97e-10,3;UBERON:0000478,2.97e-10,3;UBERON:0000158,2.97e-10,3;UBERON:0001374,6.57e-08,1;UBERON:0004252,6.57e-08,1;UBERON:0003663,6.57e-08,1;UBERON:0005090,6.57e-08,1;UBERON:0001630,6.57e-08,1;UBERON:0003661,6.57e-08,1;UBERON:0010890,6.57e-08,1;UBERON:0001383,6.57e-08,1;UBERON:0005795,6.61e-08,4;UBERON:0000995,6.61e-08,4;UBERON:0004872,2.31e-07,33|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.985004784474571,3.4859588104718,2.92399974850665,2.19550115291051,4.2946054003319,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10146440965647,1.90648863777438,0,0.32977250588296,0,0.120625849856312,0,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.216010681643603,0.209088296014469,0.655087691238533,0.269728692769641,1.07449492442937,1.04702376793612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,1.33191572024439,1.07656627931371,2.85403847818933,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p27@Setd8}} | ||
|EntrezGene=67956 | |||
|HGNC= | |||
|MCL_coexpression_id=2028 | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENSMUST00000147692_5end | |||
|description=CAGE_peak_27_at_Setd8_5end | |||
|id=chr5:124897018..124897027,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.35e-07!3;CL:0000351!1.35e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.96e-21,3;CL:0000351,9.96e-21,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003975!6.75e-11!5;UBERON:0005795!2.07e-09!4;UBERON:0000995!2.07e-09!4;UBERON:0004175!6.97e-08!9;UBERON:0000358!1.35e-07!3;UBERON:0000307!1.35e-07!3;UBERON:0005631!1.49e-07!3;UBERON:0000478!1.49e-07!3;UBERON:0000158!1.49e-07!3;UBERON:0000945!6.21e-07!16;UBERON:0010039!6.21e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.96e-21,3;UBERON:0000307,9.96e-21,3;UBERON:0007010,9.96e-21,3;UBERON:0001987,6.53e-15,2;UBERON:0003124,6.53e-15,2;UBERON:0004340,6.53e-15,2;UBERON:0005631,2.97e-10,3;UBERON:0000478,2.97e-10,3;UBERON:0000158,2.97e-10,3;UBERON:0001374,6.57e-08,1;UBERON:0004252,6.57e-08,1;UBERON:0003663,6.57e-08,1;UBERON:0005090,6.57e-08,1;UBERON:0001630,6.57e-08,1;UBERON:0003661,6.57e-08,1;UBERON:0010890,6.57e-08,1;UBERON:0001383,6.57e-08,1;UBERON:0005795,6.61e-08,4;UBERON:0000995,6.61e-08,4;UBERON:0004872,2.31e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.985004784474571,3.4859588104718,2.92399974850665,2.19550115291051,4.2946054003319,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10146440965647,1.90648863777438,0,0.32977250588296,0,0.120625849856312,0,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.216010681643603,0.209088296014469,0.655087691238533,0.269728692769641,1.07449492442937,1.04702376793612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,1.33191572024439,1.07656627931371,2.85403847818933,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p27@Setd8 | |||
}} |
Revision as of 06:27, 14 September 2013
Short description: | p27@Setd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_Setd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:2028 |
Association with transcript: | 4bp_to_ENSMUST00000147692_5end |
EntrezGene: | Setd8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.96e-21 | 3 |
trophoblast cell | 9.96e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 9.96e-21 | 3 |
blastula | 9.96e-21 | 3 |
cleaving embryo | 9.96e-21 | 3 |
placenta | 6.53e-15 | 2 |
chorion | 6.53e-15 | 2 |
allantois | 6.53e-15 | 2 |
extraembryonic membrane | 2.97e-10 | 3 |
extraembryonic structure | 2.97e-10 | 3 |
membranous layer | 2.97e-10 | 3 |
biceps femoris | 6.57e-08 | 1 |
hindlimb stylopod muscle | 6.57e-08 | 1 |
hindlimb muscle | 6.57e-08 | 1 |
muscle structure | 6.57e-08 | 1 |
muscle organ | 6.57e-08 | 1 |
limb muscle | 6.57e-08 | 1 |
pelvic complex muscle | 6.57e-08 | 1 |
muscle of leg | 6.57e-08 | 1 |
embryonic uterus | 6.61e-08 | 4 |
uterus | 6.61e-08 | 4 |
splanchnic layer of lateral plate mesoderm | 2.31e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.