FFCP PHASE1:Mm9::chr11:78137789..78137803,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11676|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-24bp_to_ENSMUST00000128032_5end|description=CAGE_peak_7_at_Aldoc_5end|id=chr11:78137789..78137803,+|ontology_enrichment_celltype=CL:0000117!1.98e-17!23;CL:0000337!1.98e-17!23;CL:0002319!1.97e-15!43;CL:0000221!6.84e-15!44;CL:0000133!6.84e-15!44;CL:0000055!3.99e-12!50;CL:0000540!1.93e-11!33;CL:0000047!1.93e-11!33;CL:0000031!1.93e-11!33;CL:0000404!1.93e-11!33;CL:0000393!8.83e-09!39;CL:0000211!8.83e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-08,23;CL:0000337,1.04e-08,23;CL:0002614,1.86e-08,3;CL:0002610,9.08e-08,3;CL:0002319,1.61e-07,43;CL:0000221,2.78e-07,44;CL:0000133,2.78e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.07e-38!73;UBERON:0005743!2.07e-38!73;UBERON:0000073!5.79e-37!75;UBERON:0001016!5.79e-37!75;UBERON:0001049!4.54e-35!52;UBERON:0005068!4.54e-35!52;UBERON:0006241!4.54e-35!52;UBERON:0007135!4.54e-35!52;UBERON:0002020!3.31e-33!34;UBERON:0000955!1.36e-32!50;UBERON:0006238!1.36e-32!50;UBERON:0002616!1.70e-31!49;UBERON:0002791!3.13e-27!29;UBERON:0003528!3.13e-27!29;UBERON:0001893!3.13e-27!29;UBERON:0000033!3.35e-27!63;UBERON:0004121!1.96e-26!102;UBERON:0000924!1.96e-26!102;UBERON:0006601!1.96e-26!102;UBERON:0002346!1.43e-24!71;UBERON:0003075!1.43e-24!71;UBERON:0007284!1.43e-24!71;UBERON:0003080!7.26e-23!40;UBERON:0002780!1.23e-21!39;UBERON:0001890!1.23e-21!39;UBERON:0006240!1.23e-21!39;UBERON:0000956!6.59e-21!21;UBERON:0001869!6.59e-21!21;UBERON:0000203!6.59e-21!21;UBERON:0003056!2.40e-19!49;UBERON:0002619!5.78e-17!17;UBERON:0007811!1.81e-16!86;UBERON:0000153!5.24e-14!94;UBERON:0002021!3.56e-13!10;UBERON:0000411!3.56e-13!10;UBERON:0001950!3.56e-13!10;UBERON:0003076!9.90e-13!12;UBERON:0003057!9.90e-13!12;UBERON:0002298!1.95e-09!6;UBERON:0000025!3.38e-09!114;UBERON:0004111!2.05e-08!122;UBERON:0002240!2.35e-08!6;UBERON:0005174!2.35e-08!6;UBERON:0001137!2.35e-08!6;UBERON:0002420!2.05e-07!8;UBERON:0007245!2.05e-07!8;UBERON:0010009!2.05e-07!8;UBERON:0010011!2.05e-07!8;UBERON:0000454!2.05e-07!8;UBERON:0000064!3.09e-07!99;UBERON:0001948!4.80e-07!5;UBERON:0002315!4.80e-07!5;UBERON:0002950!9.19e-07!4;UBERON:0001891!9.19e-07!4;UBERON:0009616!9.19e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-44,54;UBERON:0001049,1.03e-40,52;UBERON:0005068,1.03e-40,52;UBERON:0006241,1.03e-40,52;UBERON:0007135,1.03e-40,52;UBERON:0001017,9.37e-38,73;UBERON:0001016,1.50e-36,75;UBERON:0000955,1.22e-33,47;UBERON:0006238,1.22e-33,47;UBERON:0002616,5.72e-32,46;UBERON:0002020,8.25e-32,34;UBERON:0002346,9.12e-32,64;UBERON:0003075,9.12e-32,64;UBERON:0007284,9.12e-32,64;UBERON:0004121,2.68e-27,95;UBERON:0000924,2.68e-27,95;UBERON:0006601,2.68e-27,95;UBERON:0010371,5.54e-27,73;UBERON:0003528,2.72e-25,29;UBERON:0002791,2.72e-25,29;UBERON:0001893,2.72e-25,29;UBERON:0003080,7.20e-24,40;UBERON:0002619,1.92e-23,17;UBERON:0002780,4.72e-22,39;UBERON:0001890,4.72e-22,39;UBERON:0006240,4.72e-22,39;UBERON:0002021,4.80e-22,10;UBERON:0000411,4.80e-22,10;UBERON:0001950,4.80e-22,10;UBERON:0000956,1.94e-21,21;UBERON:0001869,1.94e-21,21;UBERON:0000203,1.94e-21,21;UBERON:0010314,5.96e-20,92;UBERON:0003056,1.64e-18,49;UBERON:0003076,3.52e-18,12;UBERON:0003057,3.52e-18,12;UBERON:0000025,9.90e-15,114;UBERON:0004111,2.68e-13,122;UBERON:0002950,9.57e-11,4;UBERON:0001891,9.57e-11,4;UBERON:0009616,9.57e-11,4;UBERON:0010286,9.57e-11,4;UBERON:0002240,6.55e-10,6;UBERON:0005174,6.55e-10,6;UBERON:0001137,6.55e-10,6;UBERON:0004733,8.88e-10,6;UBERON:0004732,8.88e-10,6;UBERON:0002028,8.88e-10,6;UBERON:0007277,8.88e-10,6;UBERON:0011216,1.77e-09,194;UBERON:0002038,1.86e-08,3;UBERON:0009663,1.86e-08,3;UBERON:0009661,1.86e-08,3;UBERON:0000125,1.86e-08,3;UBERON:0002308,1.86e-08,3;UBERON:0004684,9.08e-08,3;UBERON:0002275,9.08e-08,3;UBERON:0001948,9.96e-08,5;UBERON:0002315,9.96e-08,5;UBERON:0000483,3.37e-07,174;UBERON:0000119,4.89e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,1.09843091367236,1.74986909166855,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.414758449233911,0.540023753326763,0.630974884054146,6.85562362569129,3.53389665522582,0.122490799214954,0.191690942036473,0,3.30347642998166,4.72443150915195,5.52983519722476,0.131886287730194,0.182975287204819,0,7.53794097303729,5.6276261003168,5.04234217663473,3.83017161115768,3.13217697758026,0.931997229126503,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68449275218475,2.51336048176146,0,0,0,0,6.29120685500255,6.8625090422794,0.502617408451458,5.38855392596057,7.92717917724025,4.57133698031032,4.38051410282946,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=11676 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_ENSMUST00000128032_5end | |||
|description=CAGE_peak_7_at_Aldoc_5end | |||
|id=chr11:78137789..78137803,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.98e-17!23;CL:0000337!1.98e-17!23;CL:0002319!1.97e-15!43;CL:0000221!6.84e-15!44;CL:0000133!6.84e-15!44;CL:0000055!3.99e-12!50;CL:0000540!1.93e-11!33;CL:0000047!1.93e-11!33;CL:0000031!1.93e-11!33;CL:0000404!1.93e-11!33;CL:0000393!8.83e-09!39;CL:0000211!8.83e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-08,23;CL:0000337,1.04e-08,23;CL:0002614,1.86e-08,3;CL:0002610,9.08e-08,3;CL:0002319,1.61e-07,43;CL:0000221,2.78e-07,44;CL:0000133,2.78e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-38!73;UBERON:0005743!2.07e-38!73;UBERON:0000073!5.79e-37!75;UBERON:0001016!5.79e-37!75;UBERON:0001049!4.54e-35!52;UBERON:0005068!4.54e-35!52;UBERON:0006241!4.54e-35!52;UBERON:0007135!4.54e-35!52;UBERON:0002020!3.31e-33!34;UBERON:0000955!1.36e-32!50;UBERON:0006238!1.36e-32!50;UBERON:0002616!1.70e-31!49;UBERON:0002791!3.13e-27!29;UBERON:0003528!3.13e-27!29;UBERON:0001893!3.13e-27!29;UBERON:0000033!3.35e-27!63;UBERON:0004121!1.96e-26!102;UBERON:0000924!1.96e-26!102;UBERON:0006601!1.96e-26!102;UBERON:0002346!1.43e-24!71;UBERON:0003075!1.43e-24!71;UBERON:0007284!1.43e-24!71;UBERON:0003080!7.26e-23!40;UBERON:0002780!1.23e-21!39;UBERON:0001890!1.23e-21!39;UBERON:0006240!1.23e-21!39;UBERON:0000956!6.59e-21!21;UBERON:0001869!6.59e-21!21;UBERON:0000203!6.59e-21!21;UBERON:0003056!2.40e-19!49;UBERON:0002619!5.78e-17!17;UBERON:0007811!1.81e-16!86;UBERON:0000153!5.24e-14!94;UBERON:0002021!3.56e-13!10;UBERON:0000411!3.56e-13!10;UBERON:0001950!3.56e-13!10;UBERON:0003076!9.90e-13!12;UBERON:0003057!9.90e-13!12;UBERON:0002298!1.95e-09!6;UBERON:0000025!3.38e-09!114;UBERON:0004111!2.05e-08!122;UBERON:0002240!2.35e-08!6;UBERON:0005174!2.35e-08!6;UBERON:0001137!2.35e-08!6;UBERON:0002420!2.05e-07!8;UBERON:0007245!2.05e-07!8;UBERON:0010009!2.05e-07!8;UBERON:0010011!2.05e-07!8;UBERON:0000454!2.05e-07!8;UBERON:0000064!3.09e-07!99;UBERON:0001948!4.80e-07!5;UBERON:0002315!4.80e-07!5;UBERON:0002950!9.19e-07!4;UBERON:0001891!9.19e-07!4;UBERON:0009616!9.19e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-44,54;UBERON:0001049,1.03e-40,52;UBERON:0005068,1.03e-40,52;UBERON:0006241,1.03e-40,52;UBERON:0007135,1.03e-40,52;UBERON:0001017,9.37e-38,73;UBERON:0001016,1.50e-36,75;UBERON:0000955,1.22e-33,47;UBERON:0006238,1.22e-33,47;UBERON:0002616,5.72e-32,46;UBERON:0002020,8.25e-32,34;UBERON:0002346,9.12e-32,64;UBERON:0003075,9.12e-32,64;UBERON:0007284,9.12e-32,64;UBERON:0004121,2.68e-27,95;UBERON:0000924,2.68e-27,95;UBERON:0006601,2.68e-27,95;UBERON:0010371,5.54e-27,73;UBERON:0003528,2.72e-25,29;UBERON:0002791,2.72e-25,29;UBERON:0001893,2.72e-25,29;UBERON:0003080,7.20e-24,40;UBERON:0002619,1.92e-23,17;UBERON:0002780,4.72e-22,39;UBERON:0001890,4.72e-22,39;UBERON:0006240,4.72e-22,39;UBERON:0002021,4.80e-22,10;UBERON:0000411,4.80e-22,10;UBERON:0001950,4.80e-22,10;UBERON:0000956,1.94e-21,21;UBERON:0001869,1.94e-21,21;UBERON:0000203,1.94e-21,21;UBERON:0010314,5.96e-20,92;UBERON:0003056,1.64e-18,49;UBERON:0003076,3.52e-18,12;UBERON:0003057,3.52e-18,12;UBERON:0000025,9.90e-15,114;UBERON:0004111,2.68e-13,122;UBERON:0002950,9.57e-11,4;UBERON:0001891,9.57e-11,4;UBERON:0009616,9.57e-11,4;UBERON:0010286,9.57e-11,4;UBERON:0002240,6.55e-10,6;UBERON:0005174,6.55e-10,6;UBERON:0001137,6.55e-10,6;UBERON:0004733,8.88e-10,6;UBERON:0004732,8.88e-10,6;UBERON:0002028,8.88e-10,6;UBERON:0007277,8.88e-10,6;UBERON:0011216,1.77e-09,194;UBERON:0002038,1.86e-08,3;UBERON:0009663,1.86e-08,3;UBERON:0009661,1.86e-08,3;UBERON:0000125,1.86e-08,3;UBERON:0002308,1.86e-08,3;UBERON:0004684,9.08e-08,3;UBERON:0002275,9.08e-08,3;UBERON:0001948,9.96e-08,5;UBERON:0002315,9.96e-08,5;UBERON:0000483,3.37e-07,174;UBERON:0000119,4.89e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,1.09843091367236,1.74986909166855,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.414758449233911,0.540023753326763,0.630974884054146,6.85562362569129,3.53389665522582,0.122490799214954,0.191690942036473,0,3.30347642998166,4.72443150915195,5.52983519722476,0.131886287730194,0.182975287204819,0,7.53794097303729,5.6276261003168,5.04234217663473,3.83017161115768,3.13217697758026,0.931997229126503,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68449275218475,2.51336048176146,0,0,0,0,6.29120685500255,6.8625090422794,0.502617408451458,5.38855392596057,7.92717917724025,4.57133698031032,4.38051410282946,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,6.26147300952389,6.91548950893999,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,3.68260189205742,2.29158205375759,2.92150409984269,4.7955776383945,3.0215755895588,4.72515750162264,6.30449684513909,6.79713613476307,5.1776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0,0.548783918618318,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p7@Aldoc | |||
}} |
Revision as of 21:02, 12 September 2013
Short description: | p7@Aldoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Aldoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -24bp_to_ENSMUST00000128032_5end |
EntrezGene: | Aldoc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.04e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-08 | 23 |
neuron of the substantia nigra | 1.86e-08 | 3 |
raphe nuclei neuron | 9.08e-08 | 3 |
neural cell | 1.61e-07 | 43 |
ectodermal cell | 2.78e-07 | 44 |
neurectodermal cell | 2.78e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.