FFCP PHASE1:Mm9::chr6:128250457..128250462,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21679|HGNC=|UniProt=Q62296|association_with_transcript=368bp_to_ENSMUST00000006311,ENSMUST00000112157,NM_001080979,NM_011567,uc009ede.1,uc009edf.1_5end|description=CAGE_peak_9_at_Tead4_5end|id=chr6:128250457..128250462,-|ontology_enrichment_celltype=CL:0000349!9.78e-07!3;CL:0000351!9.78e-07!3|ontology_enrichment_celltype_v019_2=CL:0000349,2.49e-20,3;CL:0000351,2.49e-20,3;CL:0000217,1.53e-08,2;CL:0000328,1.53e-08,2;CL:0002573,1.53e-08,2;CL:0002376,1.53e-08,2;CL:0000218,1.53e-08,2;CL:0000692,1.53e-08,2;CL:0002377,1.53e-08,2;CL:0002375,1.53e-08,2;CL:0000333,7.98e-07,10;CL:0000095,7.98e-07,10;CL:0000243,7.98e-07,10;CL:0000123,7.98e-07,10;CL:0000125,7.98e-07,10;CL:0000030,7.98e-07,10;CL:0000339,7.98e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!7.92e-07!3;UBERON:0000478!7.92e-07!3;UBERON:0000158!7.92e-07!3;UBERON:0000358!9.78e-07!3;UBERON:0000307!9.78e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.49e-20,3;UBERON:0000307,2.49e-20,3;UBERON:0007010,2.49e-20,3;UBERON:0005631,3.11e-20,3;UBERON:0000478,3.11e-20,3;UBERON:0000158,3.11e-20,3;UBERON:0000305,6.79e-16,1;UBERON:0001987,1.81e-08,2;UBERON:0003124,1.81e-08,2;UBERON:0004340,1.81e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.459804208866946,0,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,1.17335854031855,0.847328283455281,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.443971906748129,1.88399098879899,1.00730769818447,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0.347652977834566,0.77163688185482,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p9@Tead4}} | ||
|EntrezGene=21679 | |||
|HGNC= | |||
|UniProt=Q62296 | |||
|association_with_transcript=368bp_to_ENSMUST00000006311,ENSMUST00000112157,NM_001080979,NM_011567,uc009ede.1,uc009edf.1_5end | |||
|description=CAGE_peak_9_at_Tead4_5end | |||
|id=chr6:128250457..128250462,- | |||
|ontology_enrichment_celltype=CL:0000349!9.78e-07!3;CL:0000351!9.78e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.49e-20,3;CL:0000351,2.49e-20,3;CL:0000217,1.53e-08,2;CL:0000328,1.53e-08,2;CL:0002573,1.53e-08,2;CL:0002376,1.53e-08,2;CL:0000218,1.53e-08,2;CL:0000692,1.53e-08,2;CL:0002377,1.53e-08,2;CL:0002375,1.53e-08,2;CL:0000333,7.98e-07,10;CL:0000095,7.98e-07,10;CL:0000243,7.98e-07,10;CL:0000123,7.98e-07,10;CL:0000125,7.98e-07,10;CL:0000030,7.98e-07,10;CL:0000339,7.98e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.92e-07!3;UBERON:0000478!7.92e-07!3;UBERON:0000158!7.92e-07!3;UBERON:0000358!9.78e-07!3;UBERON:0000307!9.78e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.49e-20,3;UBERON:0000307,2.49e-20,3;UBERON:0007010,2.49e-20,3;UBERON:0005631,3.11e-20,3;UBERON:0000478,3.11e-20,3;UBERON:0000158,3.11e-20,3;UBERON:0000305,6.79e-16,1;UBERON:0001987,1.81e-08,2;UBERON:0003124,1.81e-08,2;UBERON:0004340,1.81e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.459804208866946,0,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,1.17335854031855,0.847328283455281,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.443971906748129,1.88399098879899,1.00730769818447,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0.347652977834566,0.77163688185482,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p9@Tead4 | |||
}} |
Revision as of 09:00, 14 September 2013
Short description: | p9@Tead4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Tead4_5end |
Coexpression cluster: | NA |
Association with transcript: | 368bp_to_ENSMUST00000006311, ENSMUST00000112157, NM_001080979, NM_011567, uc009ede.1, uc009edf.1_5end |
EntrezGene: | Tead4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.49e-20 | 3 |
trophoblast cell | 2.49e-20 | 3 |
insulating cell | 1.53e-08 | 2 |
myelin accumulating cell | 1.53e-08 | 2 |
Schwann cell | 1.53e-08 | 2 |
non-myelinating Schwann cell | 1.53e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 1.53e-08 | 2 |
terminal Schwann cell | 1.53e-08 | 2 |
immature Schwann cell | 1.53e-08 | 2 |
Schwann cell precursor | 1.53e-08 | 2 |
migratory neural crest cell | 7.98e-07 | 10 |
neuron associated cell | 7.98e-07 | 10 |
glial cell (sensu Vertebrata) | 7.98e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.98e-07 | 10 |
glial cell | 7.98e-07 | 10 |
glioblast | 7.98e-07 | 10 |
glioblast (sensu Vertebrata) | 7.98e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 2.49e-20 | 3 |
blastula | 2.49e-20 | 3 |
cleaving embryo | 2.49e-20 | 3 |
extraembryonic membrane | 3.11e-20 | 3 |
extraembryonic structure | 3.11e-20 | 3 |
membranous layer | 3.11e-20 | 3 |
amnion | 6.79e-16 | 1 |
placenta | 1.81e-08 | 2 |
chorion | 1.81e-08 | 2 |
allantois | 1.81e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.