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FFCP PHASE1:Mm9::chr11:115024714..115024727,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=26941|HGNC=|MCL_coexpression_id=12|UniProt=P70441,Q3TG37|association_with_transcript=59bp_to_ENSMUST00000021077,NM_012030,uc007mgp.1_5end|description=CAGE_peak_2_at_Slc9a3r1_5end|id=chr11:115024714..115024727,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.52e-20!130;UBERON:0000925!2.52e-20!130;UBERON:0006595!2.52e-20!130;UBERON:0001007!1.26e-19!128;UBERON:0001555!1.26e-19!128;UBERON:0007026!1.26e-19!128;UBERON:0004921!1.99e-18!126;UBERON:0004185!1.99e-18!126;UBERON:0000160!6.19e-15!43;UBERON:0005409!8.13e-13!59;UBERON:0000490!1.65e-10!66;UBERON:0003929!2.44e-10!55;UBERON:0000344!3.66e-09!15;UBERON:0001242!5.86e-08!13;UBERON:0000060!5.86e-08!13;UBERON:0001262!5.86e-08!13;UBERON:0004786!5.86e-08!13;UBERON:0002365!3.42e-07!25;UBERON:0002330!3.42e-07!25;UBERON:0000077!3.69e-07!97;UBERON:0005911!4.67e-07!69;UBERON:0009854!4.72e-07!23;UBERON:0009856!4.72e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.68e-18,118;UBERON:0000925,4.68e-18,118;UBERON:0006595,4.68e-18,118;UBERON:0001007,2.13e-17,116;UBERON:0001555,2.13e-17,116;UBERON:0007026,2.13e-17,116;UBERON:0004921,2.95e-16,114;UBERON:0000160,4.79e-14,31;UBERON:0000490,3.59e-11,66;UBERON:0005409,3.95e-11,47;UBERON:0003929,6.60e-11,55;UBERON:0000344,3.03e-09,15;UBERON:0001242,5.01e-08,13;UBERON:0001262,5.01e-08,13;UBERON:0004786,5.01e-08,13;UBERON:0005911,2.82e-07,69;UBERON:0002365,2.98e-07,25;UBERON:0002330,2.98e-07,25;UBERON:0009854,4.12e-07,23;UBERON:0009856,4.12e-07,23|phase1_expression=2.24208385946712,186.352867679419,187.004687389099,87.7146212789807,118.211392267338,22.9994602519289,22.1932008565749,10.7172358456508,12.8117737158017,24.5767752638093,0,0.159544317990673,4.10881751834894,8.13009742496676,2.99798785634096,0.809901069559304,0,2.36596624018678,0.822686601634433,3.39511721438424,7.90902598404949,6.056748023254,3.39559725880616,36.7982572424835,44.0465819648966,106.232913361279,75.8141113239972,76.9232300688624,101.66252940916,65.2758036078221,59.8672378769323,2.54012269383853,2.46025915033828,0,8.37669697278696,5.65197794218874,5.9209113316087,12.9744805528441,10.1573594788094,10.470474879476,16.4704816648684,12.294818729252,9.22469670759192,8.18329316841252,6.89363132292699,7.89251034295231,4.69434806608824,6.5407546914134,16.0370913396164,12.2490836416799,3.21968769738334,5.75010257459886,2.68452169692378,4.35217285206807,5.37750078627942,0,1.14613375975503,3.6097046459421,1.01158230429799,1.5869729378161,0.633831403506179,0.338844532069132,0.889294796111139,5.84934816232909,4.94433181283487,3.5524005747305,4.49400165777607,13.4476406862544,0,0,0.630974884054146,3.14216082844184,3.53389665522582,0.244981598429908,0.575072826109418,0,1.10115880999389,2.93680877595932,1.68967186581868,0.659431438650969,0.365950574409639,1.04182674111352,1.95428099300967,0,1.22238598221448,1.76777151284201,0.569486723196412,0.372798891650601,0.454357159999104,0.906858721281426,4.92769630792852,18.0689014166091,31.9586526842643,17.2705021324101,24.0417274455638,25.5375325645481,13.3422199125164,0.340860645156116,1.55871602761721,1.7666978725517,2.25349471642689,1.28326477414318,0,0,5.62876706629157,4.30711771307668,3.53867111510348,25.0062696584741,1.55362730188303,0.742210695324124,1.21439728736295,0.304465478312141,0.691846491768175,0.452167921657868,1.05829836422134,0.125666591329675,14.0901131608593,1.44599356919912,3.5384422077995,0.970601099684455,0.441683036920787,0.969750506270444,26.0948465705371,4.09893115816166,3.35114730901528,53.135067483387,5.63131085177825,4.19931911695385,6.60765180779936,1.3481157546434,2.74500361691176,0.502617408451458,1.39059456153821,1.79000820131231,3.1168206683934,2.92034273521964,3.05518091550949,1.8661045591514,3.28539585963777,5.05060454127538,1.04096354370163,0.689706313300419,1.26043490863744,0.60281927134286,0.816437989815934,0.512454881139399,0.655912071918102,2.32833033665114,0.862271971731369,0.567318240503458,0.175951124163949,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,1.59227413454795,5.61770549850588,5.1469581422943,4.83077948972507,1.03562886267751,0.938104239924385,0.36012412292203,0.473489471170421,0.590292695242212,0.617068451549513,0,0.268273401399619,0.583826711835847,0,0.164167464079095,0.405344047729279,0.146199987425332,1.3173006917463,0.939444931322602,1.89260953707715,3.2929475961371,75.9963200862735,53.947915599363,0.853153002140936,1.62565670302307,2.70621668776396,11.4959609035305,20.6811580775729,26.8218132818708,42.707615539006,33.1044898995262,32.1709067264345,38.3985991039421,29.4395771549871,35.0539569375146,28.962498683209,34.4514402730055,1.89667900953082,1.02823661348756,2.25415471346161,3.25842124552503,4.26695471768777,6.59276706968994,7.01925562079256,12.989693022205,10.9899109488962,13.9438795231635,36.4636731317193,1.83529616287703,3.53806191203765,2.69834534861824,3.04290182082754,4.82354319504834,5.092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|EntrezGene=26941
|HGNC=
|MCL_coexpression_id=12
|UniProt=P70441,Q3TG37
|association_with_transcript=59bp_to_ENSMUST00000021077,NM_012030,uc007mgp.1_5end
|description=CAGE_peak_2_at_Slc9a3r1_5end
|id=chr11:115024714..115024727,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.52e-20!130;UBERON:0000925!2.52e-20!130;UBERON:0006595!2.52e-20!130;UBERON:0001007!1.26e-19!128;UBERON:0001555!1.26e-19!128;UBERON:0007026!1.26e-19!128;UBERON:0004921!1.99e-18!126;UBERON:0004185!1.99e-18!126;UBERON:0000160!6.19e-15!43;UBERON:0005409!8.13e-13!59;UBERON:0000490!1.65e-10!66;UBERON:0003929!2.44e-10!55;UBERON:0000344!3.66e-09!15;UBERON:0001242!5.86e-08!13;UBERON:0000060!5.86e-08!13;UBERON:0001262!5.86e-08!13;UBERON:0004786!5.86e-08!13;UBERON:0002365!3.42e-07!25;UBERON:0002330!3.42e-07!25;UBERON:0000077!3.69e-07!97;UBERON:0005911!4.67e-07!69;UBERON:0009854!4.72e-07!23;UBERON:0009856!4.72e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.68e-18,118;UBERON:0000925,4.68e-18,118;UBERON:0006595,4.68e-18,118;UBERON:0001007,2.13e-17,116;UBERON:0001555,2.13e-17,116;UBERON:0007026,2.13e-17,116;UBERON:0004921,2.95e-16,114;UBERON:0000160,4.79e-14,31;UBERON:0000490,3.59e-11,66;UBERON:0005409,3.95e-11,47;UBERON:0003929,6.60e-11,55;UBERON:0000344,3.03e-09,15;UBERON:0001242,5.01e-08,13;UBERON:0001262,5.01e-08,13;UBERON:0004786,5.01e-08,13;UBERON:0005911,2.82e-07,69;UBERON:0002365,2.98e-07,25;UBERON:0002330,2.98e-07,25;UBERON:0009854,4.12e-07,23;UBERON:0009856,4.12e-07,23
|phase1_expression=2.24208385946712,186.352867679419,187.004687389099,87.7146212789807,118.211392267338,22.9994602519289,22.1932008565749,10.7172358456508,12.8117737158017,24.5767752638093,0,0.159544317990673,4.10881751834894,8.13009742496676,2.99798785634096,0.809901069559304,0,2.36596624018678,0.822686601634433,3.39511721438424,7.90902598404949,6.056748023254,3.39559725880616,36.7982572424835,44.0465819648966,106.232913361279,75.8141113239972,76.9232300688624,101.66252940916,65.2758036078221,59.8672378769323,2.54012269383853,2.46025915033828,0,8.37669697278696,5.65197794218874,5.9209113316087,12.9744805528441,10.1573594788094,10.470474879476,16.4704816648684,12.294818729252,9.22469670759192,8.18329316841252,6.89363132292699,7.89251034295231,4.69434806608824,6.5407546914134,16.0370913396164,12.2490836416799,3.21968769738334,5.75010257459886,2.68452169692378,4.35217285206807,5.37750078627942,0,1.14613375975503,3.6097046459421,1.01158230429799,1.5869729378161,0.633831403506179,0.338844532069132,0.889294796111139,5.84934816232909,4.94433181283487,3.5524005747305,4.49400165777607,13.4476406862544,0,0,0.630974884054146,3.14216082844184,3.53389665522582,0.244981598429908,0.575072826109418,0,1.10115880999389,2.93680877595932,1.68967186581868,0.659431438650969,0.365950574409639,1.04182674111352,1.95428099300967,0,1.22238598221448,1.76777151284201,0.569486723196412,0.372798891650601,0.454357159999104,0.906858721281426,4.92769630792852,18.0689014166091,31.9586526842643,17.2705021324101,24.0417274455638,25.5375325645481,13.3422199125164,0.340860645156116,1.55871602761721,1.7666978725517,2.25349471642689,1.28326477414318,0,0,5.62876706629157,4.30711771307668,3.53867111510348,25.0062696584741,1.55362730188303,0.742210695324124,1.21439728736295,0.304465478312141,0.691846491768175,0.452167921657868,1.05829836422134,0.125666591329675,14.0901131608593,1.44599356919912,3.5384422077995,0.970601099684455,0.441683036920787,0.969750506270444,26.0948465705371,4.09893115816166,3.35114730901528,53.135067483387,5.63131085177825,4.19931911695385,6.60765180779936,1.3481157546434,2.74500361691176,0.502617408451458,1.39059456153821,1.79000820131231,3.1168206683934,2.92034273521964,3.05518091550949,1.8661045591514,3.28539585963777,5.05060454127538,1.04096354370163,0.689706313300419,1.26043490863744,0.60281927134286,0.816437989815934,0.512454881139399,0.655912071918102,2.32833033665114,0.862271971731369,0.567318240503458,0.175951124163949,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,1.59227413454795,5.61770549850588,5.1469581422943,4.83077948972507,1.03562886267751,0.938104239924385,0.36012412292203,0.473489471170421,0.590292695242212,0.617068451549513,0,0.268273401399619,0.583826711835847,0,0.164167464079095,0.405344047729279,0.146199987425332,1.3173006917463,0.939444931322602,1.89260953707715,3.2929475961371,75.9963200862735,53.947915599363,0.853153002140936,1.62565670302307,2.70621668776396,11.4959609035305,20.6811580775729,26.8218132818708,42.707615539006,33.1044898995262,32.1709067264345,38.3985991039421,29.4395771549871,35.0539569375146,28.962498683209,34.4514402730055,1.89667900953082,1.02823661348756,2.25415471346161,3.25842124552503,4.26695471768777,6.59276706968994,7.01925562079256,12.989693022205,10.9899109488962,13.9438795231635,36.4636731317193,1.83529616287703,3.53806191203765,2.69834534861824,3.04290182082754,4.82354319504834,5.0925170356284,4.02774592431135,11.8358715545776,9.88421087477093,20.1275489138296,21.9563159124417,11.2333562321242,20.4588891137161,26.3714197877211,28.4641677604387,4.61882975416512,0.757965647081939,0.651859905768103,1.35796068620151,0.938760993154008,1.17254380209271,2.38043640886014,2.14647012643579,1.57635144106191,2.21464689648775,2.07291199254733,3.11340297959902,2.93564469172023,2.89298117163023,4.52373851817817,2.17562273527484,13.769399644533,3.58717770196152,1.9266070798535,2.10981035865966,1.3114795630134,1.26235463602186,0,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0.876767573733936,0.790575555893047,3.85585579706168,2.12910127812403,1.78065603667255,2.11753047159649,4.28922319728592,3.98235415019888,3.64170954232472,6.34879469625977,8.48722858901541,7.67784921490009,5.84126781093462,13.1798429515793,2.54473610634254,4.27796854061666,5.05658812697306,6.32511651449993,4.12542172992747,1.70219802876894,2.52085531643834,3.62204314591713,3.21505552547388,2.6601035046341,2.67553226403106,2.63278432963394,3.95804433848979,5.86679270159276,12.2862601101016,4.41056796109924,3.46261131177108,0.807322133479528,1.56813604813205,3.34242563208782,3.77524069413641,42.8476829845881,2.22510362412612,0.854354403989263,2.47664241555867,3.33350149265481,1.13021074202815,1.0935538217682,1.60144721244566,7.81900777971734,9.79660166265606,12.8525975638114,9.54670618015114,3.63786392618306,1.82987520414164,1.62008011232702,3.3454127362315,6.33251434863915,5.39457385539283,7.60411792673091,10.2084817373772,23.7195401123981,9.32008969630389,25.9298751794728,3.58839710505549,3.97100377097034,1.16670713006429,0.904118764344118,0.675824501963113,1.76035857968631,1.8228613878153,1.36317147753424,1.69108884578204,15.5536203379247,6.95224465381992,5.47358081283443,5.13554785824136,6.49604114888975,8.05620130503666,8.74197961037565,6.85114062263822,7.23678683155428,7.57248374611107,6.02033772574499,9.17518284745249,9.06358290879698,5.09922760693746,5.49321440253374,9.74940649545409,12.6531993423217,5.65197296639697,8.22634620183984,4.25017106870819,2.62755465631655,1.83151624267265,12.4333659865858,6.01886524842436,4.51801474093653,1.38097570952153,1.14579102687879,1.71853182343688,1.37016503954128,2.2661816921691,0.675022500231806,2.2516060161211,0.453142408984205,1.55328093525546,0.518936737920883,0.399024873401031,1.70733605754134,0.972426868273176,2.72497111416377,1.47074806760011,1.55572709461131,3.29656091582231,3.20919209591815,1.26348605881899,2.28131369901216,2.82939512079114,2.1537546718073,1.79270426733634,2.29741875822453,2.38146845641537,2.20180219295225,2.12200142510076,1.64834360321323,1.47198920134397,2.40008476669791,2.12970967391205,2.14592570952589,1.74415699958794,1.97629698872194,2.11536519729191,2.92684756596436,1.57841826862706,1.22223702461276,1.12228454331548,1.66089025373844,1.67457620038458,1.63692417267876,2.16911577660352,3.08650577569826,0.749431733813838,2.8071793013449,6.01638951335235,0.57386499620653,0.882365676478062,0.927471342481686
|short_description=p2@Slc9a3r1
}}

Revision as of 18:44, 12 September 2013

Short description:p2@Slc9a3r1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Slc9a3r1_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 59bp_to_ENSMUST00000021077, NM_012030, uc007mgp.1_5end
EntrezGene:Slc9a3r1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Slc9a3r1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5186.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6187.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I387.71
CD326+ enterocyte, pool2.CNhs13197.11849-124I4118.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.19
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D244.05
GP2+ M cell, pool1.CNhs13228.11845-124H9106.23
GP2+ M cell, pool2.CNhs13231.11846-124I175.81
GP2+ M cell, pool3.CNhs13240.11847-124I276.92
Ileum epithelium, pool1.CNhs13199.10252-104B9101.66
Ileum epithelium, pool2.CNhs13232.10253-104C165.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C859.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.04
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.01
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H753.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.61
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I376.00
intestine, adult.CNhs10496.178-9A353.95
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H411.50
intestine, embryo E17.CNhs10582.482-18D320.68
intestine, embryo E18.CNhs10526.1289-20F726.82
intestine, neonate N00.CNhs11126.644-26D142.71
intestine, neonate N01.CNhs11192.1322-23E933.10
intestine, neonate N06.CNhs11102.688-20B832.17
intestine, neonate N07.CNhs11095.720-20F238.40
intestine, neonate N10.CNhs11098.755-23A529.44
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E328.96
intestine, neonate N30.CNhs11131.1384-42G134.45
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G76.59
kidney, neonate N10.CNhs11206.758-6D57.02
kidney, neonate N20.CNhs11113.832-19I112.99
kidney, neonate N25.CNhs11122.1353-25F310.99
kidney, neonate N30.CNhs11203.1385-42H113.94
liver, adult pregnant day01.CNhs10466.508-5B236.46
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F411.84
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H126.37
liver, neonate N30.CNhs11106.1382-42D128.46
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E58.49
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G913.18
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I142.85
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.85
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I123.72
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G525.93
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E215.55
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C77.24
thymus, neonate N06.CNhs11197.681-26C47.57
thymus, neonate N07.CNhs11211.713-19D36.02
thymus, neonate N10.CNhs11194.748-24E49.18
thymus, neonate N20.CNhs11186.820-7A29.06
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G25.49
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D512.43
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.68e-18118
endoderm4.68e-18118
presumptive endoderm4.68e-18118
digestive system2.13e-17116
digestive tract2.13e-17116
primitive gut2.13e-17116
subdivision of digestive tract2.95e-16114
intestine4.79e-1431
unilaminar epithelium3.59e-1166
gastrointestinal system3.95e-1147
gut epithelium6.60e-1155
mucosa3.03e-0915
intestinal mucosa5.01e-0813
wall of intestine5.01e-0813
gastrointestinal system mucosa5.01e-0813
endo-epithelium2.82e-0769
exocrine gland2.98e-0725
exocrine system2.98e-0725
digestive tract diverticulum4.12e-0723
sac4.12e-0723







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