FFCP PHASE1:Mm9::chr11:120469806..120469816,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=208990|HGNC=|MCL_coexpression_id=96|UniProt=A2ABY2|association_with_transcript=-2bp_to_ENSMUST00000061309_5end|description=CAGE_peak_2_at_Npb_5end|id=chr11:120469806..120469816,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.86e-11!22;UBERON:0007499!7.86e-11!22;UBERON:0006925!7.86e-11!22;UBERON:0009497!7.86e-11!22;UBERON:0000015!7.86e-11!22;UBERON:0002423!7.86e-11!22;UBERON:0006235!7.86e-11!22;UBERON:0008835!7.86e-11!22;UBERON:0003894!7.86e-11!22;UBERON:0004161!7.86e-11!22;UBERON:0008836!7.86e-11!22;UBERON:0009854!4.49e-10!23;UBERON:0009856!4.49e-10!23;UBERON:0005172!4.41e-09!49;UBERON:0005173!4.41e-09!49;UBERON:0002417!4.41e-09!49;UBERON:0000916!4.41e-09!49;UBERON:0002365!9.30e-09!25;UBERON:0002330!9.30e-09!25;UBERON:0003914!2.58e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0000945,2.06e-14,16;UBERON:0010039,2.06e-14,16;UBERON:0002107,7.47e-14,22;UBERON:0007499,7.47e-14,22;UBERON:0006925,7.47e-14,22;UBERON:0009497,7.47e-14,22;UBERON:0000015,7.47e-14,22;UBERON:0002423,7.47e-14,22;UBERON:0006235,7.47e-14,22;UBERON:0008835,7.47e-14,22;UBERON:0003894,7.47e-14,22;UBERON:0004161,7.47e-14,22;UBERON:0008836,7.47e-14,22;UBERON:0009854,3.29e-13,23;UBERON:0009856,3.29e-13,23;UBERON:0002365,4.48e-12,25;UBERON:0002330,4.48e-12,25;UBERON:0001041,6.08e-12,80;UBERON:0004921,1.07e-07,114;UBERON:0001007,1.60e-07,116;UBERON:0001555,1.60e-07,116;UBERON:0007026,1.60e-07,116;UBERON:0004119,2.35e-07,118;UBERON:0000925,2.35e-07,118;UBERON:0006595,2.35e-07,118;UBERON:0005172,3.95e-07,49;UBERON:0005173,3.95e-07,49;UBERON:0002417,3.95e-07,49;UBERON:0000916,3.95e-07,49|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,2.20231761998777,0.510749352340751,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.61119299110724,0,0.142371680799103,0,0,0.151143120213571,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.379419222745544,0.885660887877613,0.156998727841375,0.123397163921801,0,0.500535317148282,0.786235980452812,0.899448449539415,2.43432145666204,3.85883455603867,3.56476192493988,2.01387296215567,0.486405680325106,7.13859674289012,0,5.20997326735905,3.43241440426017,0,1.25578189465339,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,7.63736494412091,0,1.21991680276109,0.86404272657441,1.46361807210128,3.9305261474312,1.88810084938749,2.39695021603474,1.04702376793612,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0,0,0,0.920650473014354,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.77163688185482,0,0,0.342869252385415,0,0,0.290692833264657,0.376437521661322,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p2@Npb}} | ||
|EntrezGene=208990 | |||
|HGNC= | |||
|MCL_coexpression_id=96 | |||
|UniProt=A2ABY2 | |||
|association_with_transcript=-2bp_to_ENSMUST00000061309_5end | |||
|description=CAGE_peak_2_at_Npb_5end | |||
|id=chr11:120469806..120469816,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.86e-11!22;UBERON:0007499!7.86e-11!22;UBERON:0006925!7.86e-11!22;UBERON:0009497!7.86e-11!22;UBERON:0000015!7.86e-11!22;UBERON:0002423!7.86e-11!22;UBERON:0006235!7.86e-11!22;UBERON:0008835!7.86e-11!22;UBERON:0003894!7.86e-11!22;UBERON:0004161!7.86e-11!22;UBERON:0008836!7.86e-11!22;UBERON:0009854!4.49e-10!23;UBERON:0009856!4.49e-10!23;UBERON:0005172!4.41e-09!49;UBERON:0005173!4.41e-09!49;UBERON:0002417!4.41e-09!49;UBERON:0000916!4.41e-09!49;UBERON:0002365!9.30e-09!25;UBERON:0002330!9.30e-09!25;UBERON:0003914!2.58e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,2.06e-14,16;UBERON:0010039,2.06e-14,16;UBERON:0002107,7.47e-14,22;UBERON:0007499,7.47e-14,22;UBERON:0006925,7.47e-14,22;UBERON:0009497,7.47e-14,22;UBERON:0000015,7.47e-14,22;UBERON:0002423,7.47e-14,22;UBERON:0006235,7.47e-14,22;UBERON:0008835,7.47e-14,22;UBERON:0003894,7.47e-14,22;UBERON:0004161,7.47e-14,22;UBERON:0008836,7.47e-14,22;UBERON:0009854,3.29e-13,23;UBERON:0009856,3.29e-13,23;UBERON:0002365,4.48e-12,25;UBERON:0002330,4.48e-12,25;UBERON:0001041,6.08e-12,80;UBERON:0004921,1.07e-07,114;UBERON:0001007,1.60e-07,116;UBERON:0001555,1.60e-07,116;UBERON:0007026,1.60e-07,116;UBERON:0004119,2.35e-07,118;UBERON:0000925,2.35e-07,118;UBERON:0006595,2.35e-07,118;UBERON:0005172,3.95e-07,49;UBERON:0005173,3.95e-07,49;UBERON:0002417,3.95e-07,49;UBERON:0000916,3.95e-07,49 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,2.20231761998777,0.510749352340751,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.61119299110724,0,0.142371680799103,0,0,0.151143120213571,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.379419222745544,0.885660887877613,0.156998727841375,0.123397163921801,0,0.500535317148282,0.786235980452812,0.899448449539415,2.43432145666204,3.85883455603867,3.56476192493988,2.01387296215567,0.486405680325106,7.13859674289012,0,5.20997326735905,3.43241440426017,0,1.25578189465339,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,7.63736494412091,0,1.21991680276109,0.86404272657441,1.46361807210128,3.9305261474312,1.88810084938749,2.39695021603474,1.04702376793612,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0,0,0,0.920650473014354,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.77163688185482,0,0,0.342869252385415,0,0,0.290692833264657,0.376437521661322,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p2@Npb | |||
}} |
Revision as of 19:07, 12 September 2013
Short description: | p2@Npb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Npb_5end |
Coexpression cluster: | MCL_coexpression_mm9:96 |
Association with transcript: | -2bp_to_ENSMUST00000061309_5end |
EntrezGene: | Npb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stomach | 2.06e-14 | 16 |
food storage organ | 2.06e-14 | 16 |
liver | 7.47e-14 | 22 |
epithelial sac | 7.47e-14 | 22 |
digestive gland | 7.47e-14 | 22 |
epithelium of foregut-midgut junction | 7.47e-14 | 22 |
anatomical boundary | 7.47e-14 | 22 |
hepatobiliary system | 7.47e-14 | 22 |
foregut-midgut junction | 7.47e-14 | 22 |
hepatic diverticulum | 7.47e-14 | 22 |
liver primordium | 7.47e-14 | 22 |
septum transversum | 7.47e-14 | 22 |
liver bud | 7.47e-14 | 22 |
digestive tract diverticulum | 3.29e-13 | 23 |
sac | 3.29e-13 | 23 |
exocrine gland | 4.48e-12 | 25 |
exocrine system | 4.48e-12 | 25 |
foregut | 6.08e-12 | 80 |
subdivision of digestive tract | 1.07e-07 | 114 |
digestive system | 1.60e-07 | 116 |
digestive tract | 1.60e-07 | 116 |
primitive gut | 1.60e-07 | 116 |
endoderm-derived structure | 2.35e-07 | 118 |
endoderm | 2.35e-07 | 118 |
presumptive endoderm | 2.35e-07 | 118 |
abdomen element | 3.95e-07 | 49 |
abdominal segment element | 3.95e-07 | 49 |
abdominal segment of trunk | 3.95e-07 | 49 |
abdomen | 3.95e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.