FFCP PHASE1:Mm9::chr4:138375166..138375173,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18784|HGNC=|MCL_coexpression_id=3461|UniProt=Q6GTW1,P97391|association_with_transcript=0bp_to_ENSMUST00000102512,ENSMUST00000136393,NM_011110,uc008vli.2_5end|description=CAGE_peak_3_at_Pla2g5_5end|id=chr4:138375166..138375173,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.54e-12!18;UBERON:0005564!2.54e-12!18;UBERON:0004176!1.87e-11!17;UBERON:0009196!1.87e-11!17;UBERON:0009117!1.87e-11!17;UBERON:0003133!2.00e-11!24;UBERON:0005156!2.13e-11!26;UBERON:0000990!2.13e-11!26;UBERON:0003886!7.95e-11!38;UBERON:0002553!2.45e-10!39;UBERON:0002323!2.50e-10!37;UBERON:0004458!2.50e-10!37;UBERON:0000020!9.90e-10!12;UBERON:0001032!9.90e-10!12;UBERON:0004456!9.90e-10!12;UBERON:0000970!1.22e-09!9;UBERON:0000019!1.22e-09!9;UBERON:0000047!1.22e-09!9;UBERON:0004088!1.22e-09!9;UBERON:0002104!1.22e-09!9;UBERON:0001456!1.22e-09!9;UBERON:0003072!1.22e-09!9;UBERON:0003071!1.22e-09!9;UBERON:0004128!1.22e-09!9;UBERON:0003135!1.59e-09!15;UBERON:0000473!5.25e-09!14;UBERON:0005085!1.05e-08!13;UBERON:0003101!1.14e-08!16;UBERON:0000079!1.14e-08!16;UBERON:0001444!2.27e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.68e-19,9;UBERON:0000019,5.68e-19,9;UBERON:0000047,5.68e-19,9;UBERON:0010312,5.68e-19,9;UBERON:0004088,5.68e-19,9;UBERON:0002104,5.68e-19,9;UBERON:0001456,5.68e-19,9;UBERON:0003072,5.68e-19,9;UBERON:0004128,5.68e-19,9;UBERON:0003071,5.68e-19,9;UBERON:0001444,2.64e-15,11;UBERON:0000991,2.98e-15,18;UBERON:0005564,2.98e-15,18;UBERON:0000020,6.26e-14,12;UBERON:0001032,6.26e-14,12;UBERON:0004456,6.26e-14,12;UBERON:0004176,2.57e-13,17;UBERON:0009196,2.57e-13,17;UBERON:0009117,2.57e-13,17;UBERON:0000473,3.52e-13,14;UBERON:0000033,9.14e-13,13;UBERON:0005085,9.14e-13,13;UBERON:0003135,3.27e-12,15;UBERON:0003101,2.30e-11,16;UBERON:0000079,2.30e-11,16;UBERON:0003133,5.84e-11,24;UBERON:0005156,5.70e-10,26;UBERON:0000990,5.70e-10,26;UBERON:0002369,3.75e-07,7;UBERON:0006858,3.75e-07,7;UBERON:0001048,5.36e-07,134|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,7.57054909230606,0.173485326766136,0.913396434936424,0,2.26083960828934,1.52865319276416,2.26199864393416,0,0,0,0,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0.449371918214468,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,2.94618598241064,1.43132487258974,1.14951052216736,0.720248519221397,1.05493372485001,1.36072998302656,1.0249097622788,1.59292931751539,7.24369438069244,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0.703578179943289,0.36012412292203,0,0,0.308534225774757,0,0,0,0.493679549740441,1.97000956894914,1.94565142910054,2.77779976108131,2.63460138349261,2.01309628140558,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0.69560190836683,1.18088118383682,1.255989822731,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.890328018336276,0.81443479676788,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0,0.428674070063185,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.683483523191411,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,3.28936401296753,2.31641886639937,4.86127970860119,5.94135187997563,7.26511339610346,3.87278887530988,2.99470085141085,1.04859344425711,0.241584120826006,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p3@Pla2g5}} | ||
|EntrezGene=18784 | |||
|HGNC= | |||
|MCL_coexpression_id=3461 | |||
|UniProt=Q6GTW1,P97391 | |||
|association_with_transcript=0bp_to_ENSMUST00000102512,ENSMUST00000136393,NM_011110,uc008vli.2_5end | |||
|description=CAGE_peak_3_at_Pla2g5_5end | |||
|id=chr4:138375166..138375173,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.54e-12!18;UBERON:0005564!2.54e-12!18;UBERON:0004176!1.87e-11!17;UBERON:0009196!1.87e-11!17;UBERON:0009117!1.87e-11!17;UBERON:0003133!2.00e-11!24;UBERON:0005156!2.13e-11!26;UBERON:0000990!2.13e-11!26;UBERON:0003886!7.95e-11!38;UBERON:0002553!2.45e-10!39;UBERON:0002323!2.50e-10!37;UBERON:0004458!2.50e-10!37;UBERON:0000020!9.90e-10!12;UBERON:0001032!9.90e-10!12;UBERON:0004456!9.90e-10!12;UBERON:0000970!1.22e-09!9;UBERON:0000019!1.22e-09!9;UBERON:0000047!1.22e-09!9;UBERON:0004088!1.22e-09!9;UBERON:0002104!1.22e-09!9;UBERON:0001456!1.22e-09!9;UBERON:0003072!1.22e-09!9;UBERON:0003071!1.22e-09!9;UBERON:0004128!1.22e-09!9;UBERON:0003135!1.59e-09!15;UBERON:0000473!5.25e-09!14;UBERON:0005085!1.05e-08!13;UBERON:0003101!1.14e-08!16;UBERON:0000079!1.14e-08!16;UBERON:0001444!2.27e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.68e-19,9;UBERON:0000019,5.68e-19,9;UBERON:0000047,5.68e-19,9;UBERON:0010312,5.68e-19,9;UBERON:0004088,5.68e-19,9;UBERON:0002104,5.68e-19,9;UBERON:0001456,5.68e-19,9;UBERON:0003072,5.68e-19,9;UBERON:0004128,5.68e-19,9;UBERON:0003071,5.68e-19,9;UBERON:0001444,2.64e-15,11;UBERON:0000991,2.98e-15,18;UBERON:0005564,2.98e-15,18;UBERON:0000020,6.26e-14,12;UBERON:0001032,6.26e-14,12;UBERON:0004456,6.26e-14,12;UBERON:0004176,2.57e-13,17;UBERON:0009196,2.57e-13,17;UBERON:0009117,2.57e-13,17;UBERON:0000473,3.52e-13,14;UBERON:0000033,9.14e-13,13;UBERON:0005085,9.14e-13,13;UBERON:0003135,3.27e-12,15;UBERON:0003101,2.30e-11,16;UBERON:0000079,2.30e-11,16;UBERON:0003133,5.84e-11,24;UBERON:0005156,5.70e-10,26;UBERON:0000990,5.70e-10,26;UBERON:0002369,3.75e-07,7;UBERON:0006858,3.75e-07,7;UBERON:0001048,5.36e-07,134 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,7.57054909230606,0.173485326766136,0.913396434936424,0,2.26083960828934,1.52865319276416,2.26199864393416,0,0,0,0,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0.449371918214468,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,2.94618598241064,1.43132487258974,1.14951052216736,0.720248519221397,1.05493372485001,1.36072998302656,1.0249097622788,1.59292931751539,7.24369438069244,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0.703578179943289,0.36012412292203,0,0,0.308534225774757,0,0,0,0.493679549740441,1.97000956894914,1.94565142910054,2.77779976108131,2.63460138349261,2.01309628140558,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0.69560190836683,1.18088118383682,1.255989822731,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.890328018336276,0.81443479676788,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0,0.428674070063185,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.683483523191411,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,3.28936401296753,2.31641886639937,4.86127970860119,5.94135187997563,7.26511339610346,3.87278887530988,2.99470085141085,1.04859344425711,0.241584120826006,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Pla2g5 | |||
}} |
Revision as of 04:15, 14 September 2013
Short description: | p3@Pla2g5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pla2g5_5end |
Coexpression cluster: | MCL_coexpression_mm9:3461 |
Association with transcript: | 0bp_to_ENSMUST00000102512, ENSMUST00000136393, NM_011110, uc008vli.2_5end |
EntrezGene: | Pla2g5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 5.68e-19 | 9 |
camera-type eye | 5.68e-19 | 9 |
simple eye | 5.68e-19 | 9 |
immature eye | 5.68e-19 | 9 |
ocular region | 5.68e-19 | 9 |
visual system | 5.68e-19 | 9 |
face | 5.68e-19 | 9 |
optic cup | 5.68e-19 | 9 |
optic vesicle | 5.68e-19 | 9 |
eye primordium | 5.68e-19 | 9 |
subdivision of head | 2.64e-15 | 11 |
gonad | 2.98e-15 | 18 |
gonad primordium | 2.98e-15 | 18 |
sense organ | 6.26e-14 | 12 |
sensory system | 6.26e-14 | 12 |
entire sense organ system | 6.26e-14 | 12 |
external genitalia | 2.57e-13 | 17 |
indifferent external genitalia | 2.57e-13 | 17 |
indifferent gonad | 2.57e-13 | 17 |
testis | 3.52e-13 | 14 |
head | 9.14e-13 | 13 |
ectodermal placode | 9.14e-13 | 13 |
male reproductive organ | 3.27e-12 | 15 |
male organism | 2.30e-11 | 16 |
male reproductive system | 2.30e-11 | 16 |
reproductive organ | 5.84e-11 | 24 |
reproductive structure | 5.70e-10 | 26 |
reproductive system | 5.70e-10 | 26 |
adrenal gland | 3.75e-07 | 7 |
adrenal/interrenal gland | 3.75e-07 | 7 |
primordium | 5.36e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.