FFCP PHASE1:Mm9::chr1:84577274..84577285,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1052|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:84577274..84577285,-|id=chr1:84577274..84577285,-|ontology_enrichment_celltype=CL:0000117!1.52e-28!23;CL:0000337!1.52e-28!23;CL:0000540!1.23e-19!33;CL:0000047!1.23e-19!33;CL:0000031!1.23e-19!33;CL:0000404!1.23e-19!33;CL:0002319!1.54e-19!43;CL:0000221!6.72e-19!44;CL:0000133!6.72e-19!44;CL:0000055!1.32e-15!50;CL:0000393!1.78e-15!39;CL:0000211!1.78e-15!39;CL:0002321!7.47e-09!70;CL:0000220!7.47e-09!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-37,23;CL:0000337,1.13e-37,23;CL:0000540,4.81e-26,33;CL:0000047,4.81e-26,33;CL:0000031,4.81e-26,33;CL:0000404,4.81e-26,33;CL:0000393,6.41e-22,39;CL:0000211,6.41e-22,39;CL:0002319,8.33e-20,43;CL:0000221,2.45e-19,44;CL:0000133,2.45e-19,44;CL:0002611,2.24e-15,2;CL:0002321,7.99e-12,70;CL:0002612,2.91e-11,3;CL:0002610,9.09e-11,3;CL:0002614,1.02e-10,3;CL:0000120,1.27e-10,3;CL:0000723,7.27e-09,91;CL:0000048,7.27e-09,91;CL:0000034,2.99e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.07e-32!73;UBERON:0005743!3.07e-32!73;UBERON:0000073!5.15e-31!75;UBERON:0001016!5.15e-31!75;UBERON:0002020!2.27e-27!34;UBERON:0001049!2.28e-27!52;UBERON:0005068!2.28e-27!52;UBERON:0006241!2.28e-27!52;UBERON:0007135!2.28e-27!52;UBERON:0002346!4.59e-26!71;UBERON:0003075!4.59e-26!71;UBERON:0007284!4.59e-26!71;UBERON:0004121!6.33e-26!102;UBERON:0000924!6.33e-26!102;UBERON:0006601!6.33e-26!102;UBERON:0000955!9.64e-25!50;UBERON:0006238!9.64e-25!50;UBERON:0002616!9.08e-24!49;UBERON:0000033!2.36e-22!63;UBERON:0002791!1.77e-20!29;UBERON:0003528!1.77e-20!29;UBERON:0001893!1.77e-20!29;UBERON:0003056!5.46e-17!49;UBERON:0003080!6.01e-17!40;UBERON:0002780!3.22e-16!39;UBERON:0001890!3.22e-16!39;UBERON:0006240!3.22e-16!39;UBERON:0007811!1.87e-13!86;UBERON:0003076!1.44e-11!12;UBERON:0003057!1.44e-11!12;UBERON:0002420!1.91e-11!8;UBERON:0007245!1.91e-11!8;UBERON:0010009!1.91e-11!8;UBERON:0010011!1.91e-11!8;UBERON:0000454!1.91e-11!8;UBERON:0000153!2.03e-11!94;UBERON:0000956!3.05e-11!21;UBERON:0001869!3.05e-11!21;UBERON:0000203!3.05e-11!21;UBERON:0002240!1.56e-09!6;UBERON:0005174!1.56e-09!6;UBERON:0001137!1.56e-09!6;UBERON:0000025!1.00e-08!114;UBERON:0001948!1.38e-08!5;UBERON:0002315!1.38e-08!5;UBERON:0004111!4.37e-08!122;UBERON:0002619!9.17e-08!17;UBERON:0000369!2.61e-07!5;UBERON:0002435!2.61e-07!5;UBERON:0000204!2.61e-07!5;UBERON:0010082!2.61e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.73e-24,5;UBERON:0002315,3.73e-24,5;UBERON:0002240,3.37e-20,6;UBERON:0005174,3.37e-20,6;UBERON:0001137,3.37e-20,6;UBERON:0003076,1.59e-15,12;UBERON:0003057,1.59e-15,12;UBERON:0002256,2.24e-15,2;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0000073,7.81e-13,54;UBERON:0002257,2.91e-11,3;UBERON:0004684,9.09e-11,3;UBERON:0002275,9.09e-11,3;UBERON:0002038,1.02e-10,3;UBERON:0009663,1.02e-10,3;UBERON:0009661,1.02e-10,3;UBERON:0000125,1.02e-10,3;UBERON:0002308,1.02e-10,3;UBERON:0002020,3.09e-10,34;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002420,8.10e-09,8;UBERON:0007245,8.10e-09,8;UBERON:0010009,8.10e-09,8;UBERON:0010011,8.10e-09,8;UBERON:0000454,8.10e-09,8;UBERON:0001049,1.75e-08,52;UBERON:0005068,1.75e-08,52;UBERON:0006241,1.75e-08,52;UBERON:0007135,1.75e-08,52;UBERON:0002950,2.91e-08,4;UBERON:0001891,2.91e-08,4;UBERON:0009616,2.91e-08,4;UBERON:0010286,2.91e-08,4;UBERON:0002346,9.25e-07,64;UBERON:0003075,9.25e-07,64;UBERON:0007284,9.25e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.388859798148567,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.675029691658453,0.420649922702764,1.14260393761521,1.98781686856452,0.244981598429908,0.479227355091182,0,2.20231761998777,1.53224805702225,0.921639199537461,0.527545150920775,1.55528994124096,0.52091337055676,1.3959149950069,2.25105044012672,0.763991238884051,2.35702868378934,2.42031857358475,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.452167921657868,0,0,0,0,0,0,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0.646270193198397,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0|short_description=p@chr1:84577274..84577285,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1052 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:84577274..84577285,- | |||
|id=chr1:84577274..84577285,- | |||
|ontology_enrichment_celltype=CL:0000117!1.52e-28!23;CL:0000337!1.52e-28!23;CL:0000540!1.23e-19!33;CL:0000047!1.23e-19!33;CL:0000031!1.23e-19!33;CL:0000404!1.23e-19!33;CL:0002319!1.54e-19!43;CL:0000221!6.72e-19!44;CL:0000133!6.72e-19!44;CL:0000055!1.32e-15!50;CL:0000393!1.78e-15!39;CL:0000211!1.78e-15!39;CL:0002321!7.47e-09!70;CL:0000220!7.47e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-37,23;CL:0000337,1.13e-37,23;CL:0000540,4.81e-26,33;CL:0000047,4.81e-26,33;CL:0000031,4.81e-26,33;CL:0000404,4.81e-26,33;CL:0000393,6.41e-22,39;CL:0000211,6.41e-22,39;CL:0002319,8.33e-20,43;CL:0000221,2.45e-19,44;CL:0000133,2.45e-19,44;CL:0002611,2.24e-15,2;CL:0002321,7.99e-12,70;CL:0002612,2.91e-11,3;CL:0002610,9.09e-11,3;CL:0002614,1.02e-10,3;CL:0000120,1.27e-10,3;CL:0000723,7.27e-09,91;CL:0000048,7.27e-09,91;CL:0000034,2.99e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.07e-32!73;UBERON:0005743!3.07e-32!73;UBERON:0000073!5.15e-31!75;UBERON:0001016!5.15e-31!75;UBERON:0002020!2.27e-27!34;UBERON:0001049!2.28e-27!52;UBERON:0005068!2.28e-27!52;UBERON:0006241!2.28e-27!52;UBERON:0007135!2.28e-27!52;UBERON:0002346!4.59e-26!71;UBERON:0003075!4.59e-26!71;UBERON:0007284!4.59e-26!71;UBERON:0004121!6.33e-26!102;UBERON:0000924!6.33e-26!102;UBERON:0006601!6.33e-26!102;UBERON:0000955!9.64e-25!50;UBERON:0006238!9.64e-25!50;UBERON:0002616!9.08e-24!49;UBERON:0000033!2.36e-22!63;UBERON:0002791!1.77e-20!29;UBERON:0003528!1.77e-20!29;UBERON:0001893!1.77e-20!29;UBERON:0003056!5.46e-17!49;UBERON:0003080!6.01e-17!40;UBERON:0002780!3.22e-16!39;UBERON:0001890!3.22e-16!39;UBERON:0006240!3.22e-16!39;UBERON:0007811!1.87e-13!86;UBERON:0003076!1.44e-11!12;UBERON:0003057!1.44e-11!12;UBERON:0002420!1.91e-11!8;UBERON:0007245!1.91e-11!8;UBERON:0010009!1.91e-11!8;UBERON:0010011!1.91e-11!8;UBERON:0000454!1.91e-11!8;UBERON:0000153!2.03e-11!94;UBERON:0000956!3.05e-11!21;UBERON:0001869!3.05e-11!21;UBERON:0000203!3.05e-11!21;UBERON:0002240!1.56e-09!6;UBERON:0005174!1.56e-09!6;UBERON:0001137!1.56e-09!6;UBERON:0000025!1.00e-08!114;UBERON:0001948!1.38e-08!5;UBERON:0002315!1.38e-08!5;UBERON:0004111!4.37e-08!122;UBERON:0002619!9.17e-08!17;UBERON:0000369!2.61e-07!5;UBERON:0002435!2.61e-07!5;UBERON:0000204!2.61e-07!5;UBERON:0010082!2.61e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.73e-24,5;UBERON:0002315,3.73e-24,5;UBERON:0002240,3.37e-20,6;UBERON:0005174,3.37e-20,6;UBERON:0001137,3.37e-20,6;UBERON:0003076,1.59e-15,12;UBERON:0003057,1.59e-15,12;UBERON:0002256,2.24e-15,2;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0000073,7.81e-13,54;UBERON:0002257,2.91e-11,3;UBERON:0004684,9.09e-11,3;UBERON:0002275,9.09e-11,3;UBERON:0002038,1.02e-10,3;UBERON:0009663,1.02e-10,3;UBERON:0009661,1.02e-10,3;UBERON:0000125,1.02e-10,3;UBERON:0002308,1.02e-10,3;UBERON:0002020,3.09e-10,34;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002420,8.10e-09,8;UBERON:0007245,8.10e-09,8;UBERON:0010009,8.10e-09,8;UBERON:0010011,8.10e-09,8;UBERON:0000454,8.10e-09,8;UBERON:0001049,1.75e-08,52;UBERON:0005068,1.75e-08,52;UBERON:0006241,1.75e-08,52;UBERON:0007135,1.75e-08,52;UBERON:0002950,2.91e-08,4;UBERON:0001891,2.91e-08,4;UBERON:0009616,2.91e-08,4;UBERON:0010286,2.91e-08,4;UBERON:0002346,9.25e-07,64;UBERON:0003075,9.25e-07,64;UBERON:0007284,9.25e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.388859798148567,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.675029691658453,0.420649922702764,1.14260393761521,1.98781686856452,0.244981598429908,0.479227355091182,0,2.20231761998777,1.53224805702225,0.921639199537461,0.527545150920775,1.55528994124096,0.52091337055676,1.3959149950069,2.25105044012672,0.763991238884051,2.35702868378934,2.42031857358475,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.452167921657868,0,0,0,0,0,0,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0.646270193198397,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr1:84577274..84577285,- | |||
}} |
Revision as of 21:05, 13 September 2013
Short description: | p@chr1:84577274..84577285, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:84577274..84577285, - |
Coexpression cluster: | MCL_coexpression_mm9:1052 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-37 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-37 | 23 |
neuron | 4.81e-26 | 33 |
neuronal stem cell | 4.81e-26 | 33 |
neuroblast | 4.81e-26 | 33 |
electrically signaling cell | 4.81e-26 | 33 |
electrically responsive cell | 6.41e-22 | 39 |
electrically active cell | 6.41e-22 | 39 |
neural cell | 8.33e-20 | 43 |
ectodermal cell | 2.45e-19 | 44 |
neurectodermal cell | 2.45e-19 | 44 |
neuron of the dorsal spinal cord | 2.24e-15 | 2 |
embryonic cell | 7.99e-12 | 70 |
neuron of the ventral spinal cord | 2.91e-11 | 3 |
raphe nuclei neuron | 9.09e-11 | 3 |
neuron of the substantia nigra | 1.02e-10 | 3 |
granule cell | 1.27e-10 | 3 |
somatic stem cell | 7.27e-09 | 91 |
multi fate stem cell | 7.27e-09 | 91 |
stem cell | 2.99e-08 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.