FFCP PHASE1:Mm9::chr2:71367855..71367864,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13390|HGNC=|MCL_coexpression_id=845|UniProt=G3V009|association_with_transcript=-45bp_to_ENSMUST00000145444_5end|description=CAGE_peak_6_at_Dlx1_5end|id=chr2:71367855..71367864,+|ontology_enrichment_celltype=CL:0000540!1.60e-14!33;CL:0000047!1.60e-14!33;CL:0000031!1.60e-14!33;CL:0000404!1.60e-14!33;CL:0000393!1.73e-14!39;CL:0000211!1.73e-14!39;CL:0000221!5.78e-13!44;CL:0000133!5.78e-13!44;CL:0002319!2.37e-12!43;CL:0000055!3.09e-12!50;CL:0000107!3.26e-11!9;CL:0002609!1.46e-07!6;CL:0002321!7.75e-07!70;CL:0000220!7.75e-07!70|ontology_enrichment_celltype_v019_2=CL:0000107,4.20e-36,9;CL:0000540,1.60e-29,33;CL:0000047,1.60e-29,33;CL:0000031,1.60e-29,33;CL:0000404,1.60e-29,33;CL:0000393,1.05e-24,39;CL:0000211,1.05e-24,39;CL:0002319,3.09e-22,43;CL:0000221,1.09e-21,44;CL:0000133,1.09e-21,44;CL:0002608,1.90e-17,3;CL:0002613,3.53e-16,3;CL:0002321,6.37e-13,70;CL:0000723,4.80e-11,91;CL:0000048,4.80e-11,91;CL:0000034,3.13e-10,97;CL:0002609,5.55e-09,6;CL:0000117,4.69e-08,23;CL:0000337,4.69e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.03e-13!102;UBERON:0000924!9.03e-13!102;UBERON:0006601!9.03e-13!102;UBERON:0002410!3.26e-11!9;UBERON:0000073!5.23e-11!75;UBERON:0001016!5.23e-11!75;UBERON:0001017!5.71e-11!73;UBERON:0005743!5.71e-11!73;UBERON:0000010!4.89e-10!11;UBERON:0003056!4.51e-09!49;UBERON:0000033!5.64e-09!63;UBERON:0002791!5.63e-08!29;UBERON:0003528!5.63e-08!29;UBERON:0001893!5.63e-08!29;UBERON:0002346!2.64e-07!71;UBERON:0003075!2.64e-07!71;UBERON:0007284!2.64e-07!71;UBERON:0002420!3.08e-07!8;UBERON:0007245!3.08e-07!8;UBERON:0010009!3.08e-07!8;UBERON:0010011!3.08e-07!8;UBERON:0000454!3.08e-07!8;UBERON:0003080!4.47e-07!40;UBERON:0000369!9.15e-07!5;UBERON:0002435!9.15e-07!5;UBERON:0000204!9.15e-07!5;UBERON:0010082!9.15e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.20e-36,9;UBERON:0000010,2.10e-29,11;UBERON:0000369,8.67e-17,5;UBERON:0002435,8.67e-17,5;UBERON:0000204,8.67e-17,5;UBERON:0010082,8.67e-17,5;UBERON:0001017,2.00e-16,73;UBERON:0000011,3.53e-16,3;UBERON:0000013,5.04e-16,3;UBERON:0001016,6.22e-16,75;UBERON:0004121,3.90e-12,95;UBERON:0000924,3.90e-12,95;UBERON:0006601,3.90e-12,95;UBERON:0002420,1.39e-10,8;UBERON:0007245,1.39e-10,8;UBERON:0010009,1.39e-10,8;UBERON:0010011,1.39e-10,8;UBERON:0000454,1.39e-10,8;UBERON:0003528,2.19e-08,29;UBERON:0002791,2.19e-08,29;UBERON:0001893,2.19e-08,29;UBERON:0010313,4.27e-08,3;UBERON:0002342,4.27e-08,3;UBERON:0002005,4.27e-08,3;UBERON:0005428,4.27e-08,3;UBERON:0005062,4.27e-08,3;UBERON:0001954,9.21e-08,7;UBERON:0003022,9.21e-08,7;UBERON:0002421,9.21e-08,7;UBERON:0000349,9.21e-08,7;UBERON:0002600,9.21e-08,7;UBERON:0002020,4.80e-07,34|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.183546752161682,0,0.872100625521786,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.810035629990144,0.210324961351382,0,0,3.67472397644862,5.94241920313065,6.43453150627015,0,0,0.153606533256243,2.1101806036831,3.38504281328916,1.04182674111352,0,0.56276261003168,0.45839474333043,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,1.36344258062446,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,1.63350657746724,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0,0.260240885925407,0.229902104433473,0.540186389416048,0,0.204109497453984,0.512454881139399,0.0937017245597288,0,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,2.2085575359138,2.73307121007647,0.430846795465598,2.38968797952552,2.00518806674155,1.41538265394416,2.42886421004937,1.16902343164525,1.97643888973262,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0.467863216890817,0.644613162144895,0,0,0|short_description=p6@Dlx1}} | ||
|EntrezGene=13390 | |||
|HGNC= | |||
|MCL_coexpression_id=845 | |||
|UniProt=G3V009 | |||
|association_with_transcript=-45bp_to_ENSMUST00000145444_5end | |||
|description=CAGE_peak_6_at_Dlx1_5end | |||
|id=chr2:71367855..71367864,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.60e-14!33;CL:0000047!1.60e-14!33;CL:0000031!1.60e-14!33;CL:0000404!1.60e-14!33;CL:0000393!1.73e-14!39;CL:0000211!1.73e-14!39;CL:0000221!5.78e-13!44;CL:0000133!5.78e-13!44;CL:0002319!2.37e-12!43;CL:0000055!3.09e-12!50;CL:0000107!3.26e-11!9;CL:0002609!1.46e-07!6;CL:0002321!7.75e-07!70;CL:0000220!7.75e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.20e-36,9;CL:0000540,1.60e-29,33;CL:0000047,1.60e-29,33;CL:0000031,1.60e-29,33;CL:0000404,1.60e-29,33;CL:0000393,1.05e-24,39;CL:0000211,1.05e-24,39;CL:0002319,3.09e-22,43;CL:0000221,1.09e-21,44;CL:0000133,1.09e-21,44;CL:0002608,1.90e-17,3;CL:0002613,3.53e-16,3;CL:0002321,6.37e-13,70;CL:0000723,4.80e-11,91;CL:0000048,4.80e-11,91;CL:0000034,3.13e-10,97;CL:0002609,5.55e-09,6;CL:0000117,4.69e-08,23;CL:0000337,4.69e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.03e-13!102;UBERON:0000924!9.03e-13!102;UBERON:0006601!9.03e-13!102;UBERON:0002410!3.26e-11!9;UBERON:0000073!5.23e-11!75;UBERON:0001016!5.23e-11!75;UBERON:0001017!5.71e-11!73;UBERON:0005743!5.71e-11!73;UBERON:0000010!4.89e-10!11;UBERON:0003056!4.51e-09!49;UBERON:0000033!5.64e-09!63;UBERON:0002791!5.63e-08!29;UBERON:0003528!5.63e-08!29;UBERON:0001893!5.63e-08!29;UBERON:0002346!2.64e-07!71;UBERON:0003075!2.64e-07!71;UBERON:0007284!2.64e-07!71;UBERON:0002420!3.08e-07!8;UBERON:0007245!3.08e-07!8;UBERON:0010009!3.08e-07!8;UBERON:0010011!3.08e-07!8;UBERON:0000454!3.08e-07!8;UBERON:0003080!4.47e-07!40;UBERON:0000369!9.15e-07!5;UBERON:0002435!9.15e-07!5;UBERON:0000204!9.15e-07!5;UBERON:0010082!9.15e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.20e-36,9;UBERON:0000010,2.10e-29,11;UBERON:0000369,8.67e-17,5;UBERON:0002435,8.67e-17,5;UBERON:0000204,8.67e-17,5;UBERON:0010082,8.67e-17,5;UBERON:0001017,2.00e-16,73;UBERON:0000011,3.53e-16,3;UBERON:0000013,5.04e-16,3;UBERON:0001016,6.22e-16,75;UBERON:0004121,3.90e-12,95;UBERON:0000924,3.90e-12,95;UBERON:0006601,3.90e-12,95;UBERON:0002420,1.39e-10,8;UBERON:0007245,1.39e-10,8;UBERON:0010009,1.39e-10,8;UBERON:0010011,1.39e-10,8;UBERON:0000454,1.39e-10,8;UBERON:0003528,2.19e-08,29;UBERON:0002791,2.19e-08,29;UBERON:0001893,2.19e-08,29;UBERON:0010313,4.27e-08,3;UBERON:0002342,4.27e-08,3;UBERON:0002005,4.27e-08,3;UBERON:0005428,4.27e-08,3;UBERON:0005062,4.27e-08,3;UBERON:0001954,9.21e-08,7;UBERON:0003022,9.21e-08,7;UBERON:0002421,9.21e-08,7;UBERON:0000349,9.21e-08,7;UBERON:0002600,9.21e-08,7;UBERON:0002020,4.80e-07,34 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.183546752161682,0,0.872100625521786,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.810035629990144,0.210324961351382,0,0,3.67472397644862,5.94241920313065,6.43453150627015,0,0,0.153606533256243,2.1101806036831,3.38504281328916,1.04182674111352,0,0.56276261003168,0.45839474333043,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,1.36344258062446,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,1.63350657746724,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0,0.260240885925407,0.229902104433473,0.540186389416048,0,0.204109497453984,0.512454881139399,0.0937017245597288,0,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,2.2085575359138,2.73307121007647,0.430846795465598,2.38968797952552,2.00518806674155,1.41538265394416,2.42886421004937,1.16902343164525,1.97643888973262,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0.467863216890817,0.644613162144895,0,0,0 | |||
|short_description=p6@Dlx1 | |||
}} |
Revision as of 00:26, 14 September 2013
Short description: | p6@Dlx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dlx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:845 |
Association with transcript: | -45bp_to_ENSMUST00000145444_5end |
EntrezGene: | Dlx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.20e-36 | 9 |
neuron | 1.60e-29 | 33 |
neuronal stem cell | 1.60e-29 | 33 |
neuroblast | 1.60e-29 | 33 |
electrically signaling cell | 1.60e-29 | 33 |
electrically responsive cell | 1.05e-24 | 39 |
electrically active cell | 1.05e-24 | 39 |
neural cell | 3.09e-22 | 43 |
ectodermal cell | 1.09e-21 | 44 |
neurectodermal cell | 1.09e-21 | 44 |
hippocampal neuron | 1.90e-17 | 3 |
striatum neuron | 3.53e-16 | 3 |
embryonic cell | 6.37e-13 | 70 |
somatic stem cell | 4.80e-11 | 91 |
multi fate stem cell | 4.80e-11 | 91 |
stem cell | 3.13e-10 | 97 |
neuron of cerebral cortex | 5.55e-09 | 6 |
CNS neuron (sensu Vertebrata) | 4.69e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.69e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 4.20e-36 | 9 |
peripheral nervous system | 2.10e-29 | 11 |
corpus striatum | 8.67e-17 | 5 |
striatum | 8.67e-17 | 5 |
ventral part of telencephalon | 8.67e-17 | 5 |
future corpus striatum | 8.67e-17 | 5 |
central nervous system | 2.00e-16 | 73 |
parasympathetic nervous system | 3.53e-16 | 3 |
sympathetic nervous system | 5.04e-16 | 3 |
nervous system | 6.22e-16 | 75 |
ectoderm-derived structure | 3.90e-12 | 95 |
ectoderm | 3.90e-12 | 95 |
presumptive ectoderm | 3.90e-12 | 95 |
basal ganglion | 1.39e-10 | 8 |
nuclear complex of neuraxis | 1.39e-10 | 8 |
aggregate regional part of brain | 1.39e-10 | 8 |
collection of basal ganglia | 1.39e-10 | 8 |
cerebral subcortex | 1.39e-10 | 8 |
brain grey matter | 2.19e-08 | 29 |
regional part of telencephalon | 2.19e-08 | 29 |
telencephalon | 2.19e-08 | 29 |
neural crest-derived structure | 4.27e-08 | 3 |
neural crest | 4.27e-08 | 3 |
enteric nervous system | 4.27e-08 | 3 |
vagal neural crest | 4.27e-08 | 3 |
neural fold | 4.27e-08 | 3 |
Ammon's horn | 9.21e-08 | 7 |
lobe parts of cerebral cortex | 9.21e-08 | 7 |
hippocampal formation | 9.21e-08 | 7 |
limbic system | 9.21e-08 | 7 |
limbic lobe | 9.21e-08 | 7 |
gray matter | 4.80e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.