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FFCP PHASE1:Mm9::chr7:104937295..104937344,+: Difference between revisions

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|id=chr7:104937295..104937344,+
|id=chr7:104937295..104937344,+
|ontology_enrichment_celltype=CL:0002321!1.13e-09!70;CL:0000220!1.13e-09!70;CL:0002076!3.48e-09!15
|ontology_enrichment_celltype=CL:0002321!1.13e-09!70;CL:0000220!1.13e-09!70;CL:0002076!3.48e-09!15
|ontology_enrichment_celltype_v019_2=CL:0002321,4.64e-10,70;CL:0002076,1.25e-09,15;CL:0000066,1.29e-07,25;CL:0002563,9.72e-07,9;CL:0002251,9.72e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.07e-15!75;UBERON:0001016!3.07e-15!75;UBERON:0001017!7.41e-15!73;UBERON:0005743!7.41e-15!73;UBERON:0000955!4.74e-14!50;UBERON:0006238!4.74e-14!50;UBERON:0001049!8.44e-14!52;UBERON:0005068!8.44e-14!52;UBERON:0006241!8.44e-14!52;UBERON:0007135!8.44e-14!52;UBERON:0002616!1.96e-13!49;UBERON:0004121!2.47e-13!102;UBERON:0000924!2.47e-13!102;UBERON:0006601!2.47e-13!102;UBERON:0000033!2.72e-12!63;UBERON:0003080!5.14e-11!40;UBERON:0002780!1.79e-10!39;UBERON:0001890!1.79e-10!39;UBERON:0006240!1.79e-10!39;UBERON:0002346!2.53e-10!71;UBERON:0003075!2.53e-10!71;UBERON:0007284!2.53e-10!71;UBERON:0002020!9.49e-10!34;UBERON:0000344!1.07e-09!15;UBERON:0003056!5.85e-09!49;UBERON:0002791!6.80e-09!29;UBERON:0003528!6.80e-09!29;UBERON:0001893!6.80e-09!29;UBERON:0001242!9.02e-09!13;UBERON:0000060!9.02e-09!13;UBERON:0001262!9.02e-09!13;UBERON:0004786!9.02e-09!13;UBERON:0000064!2.11e-08!99;UBERON:0000160!5.84e-08!43;UBERON:0000485!3.41e-07!11
|ontology_enrichment_uberon=UBERON:0000073!3.07e-15!75;UBERON:0001016!3.07e-15!75;UBERON:0001017!7.41e-15!73;UBERON:0005743!7.41e-15!73;UBERON:0000955!4.74e-14!50;UBERON:0006238!4.74e-14!50;UBERON:0001049!8.44e-14!52;UBERON:0005068!8.44e-14!52;UBERON:0006241!8.44e-14!52;UBERON:0007135!8.44e-14!52;UBERON:0002616!1.96e-13!49;UBERON:0004121!2.47e-13!102;UBERON:0000924!2.47e-13!102;UBERON:0006601!2.47e-13!102;UBERON:0000033!2.72e-12!63;UBERON:0003080!5.14e-11!40;UBERON:0002780!1.79e-10!39;UBERON:0001890!1.79e-10!39;UBERON:0006240!1.79e-10!39;UBERON:0002346!2.53e-10!71;UBERON:0003075!2.53e-10!71;UBERON:0007284!2.53e-10!71;UBERON:0002020!9.49e-10!34;UBERON:0000344!1.07e-09!15;UBERON:0003056!5.85e-09!49;UBERON:0002791!6.80e-09!29;UBERON:0003528!6.80e-09!29;UBERON:0001893!6.80e-09!29;UBERON:0001242!9.02e-09!13;UBERON:0000060!9.02e-09!13;UBERON:0001262!9.02e-09!13;UBERON:0004786!9.02e-09!13;UBERON:0000064!2.11e-08!99;UBERON:0000160!5.84e-08!43;UBERON:0000485!3.41e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.45e-15,75;UBERON:0000073,1.30e-14,54;UBERON:0001017,1.37e-14,73;UBERON:0001049,5.75e-14,52;UBERON:0005068,5.75e-14,52;UBERON:0006241,5.75e-14,52;UBERON:0007135,5.75e-14,52;UBERON:0000955,4.38e-13,47;UBERON:0006238,4.38e-13,47;UBERON:0004121,8.87e-13,95;UBERON:0000924,8.87e-13,95;UBERON:0006601,8.87e-13,95;UBERON:0002616,1.87e-12,46;UBERON:0000160,2.36e-12,31;UBERON:0003080,3.05e-11,40;UBERON:0010371,5.00e-11,73;UBERON:0002346,9.04e-11,64;UBERON:0003075,9.04e-11,64;UBERON:0007284,9.04e-11,64;UBERON:0002780,1.13e-10,39;UBERON:0001890,1.13e-10,39;UBERON:0006240,1.13e-10,39;UBERON:0002020,3.16e-10,34;UBERON:0000344,3.60e-10,15;UBERON:0011216,1.85e-09,194;UBERON:0003528,2.54e-09,29;UBERON:0002791,2.54e-09,29;UBERON:0001893,2.54e-09,29;UBERON:0001242,3.42e-09,13;UBERON:0001262,3.42e-09,13;UBERON:0004786,3.42e-09,13;UBERON:0003056,1.28e-08,49;UBERON:0005409,5.22e-08,47;UBERON:0000485,1.59e-07,11;UBERON:0002619,9.12e-07,17;UBERON:0003350,9.72e-07,9;UBERON:0004808,9.72e-07,9;UBERON:0001277,9.72e-07,9
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|phase1_expression=3.84357233051505,18.1467211972468,24.1149596876454,27.2217790176147,25.5456822272637,10.2406355866253,9.34450562382103,0.129123323441576,1.54867594366833,2.34064526321993,0,0.159544317990673,0.171200729931206,0,0.666219523631325,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,2.46625541438102,0.198581902401771,0,6.55968933452967,4.35877634027623,17.8011908875656,15.0766698655676,9.9116767035509,7.41091335879858,7.56090389279792,6.65191531965914,0,0,0,4.62162591602039,3.82339684324532,3.06254034393554,0.837063261473815,1.5626706890476,0.523523743973798,2.94115744015507,1.36609096991689,2.42755176515577,2.01434908760924,1.92616169317078,4.40512205188036,0.782391344348039,4.57852828398938,5.05278220289285,4.08302788055995,2.2397827460058,4.31257693094915,0,0,0,2.57259436035947,0.573066879877513,1.54701627683233,3.23706337375356,3.1739458756322,1.90149421051854,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,0.384218305321555,1.24427534770173,1.21505344498522,1.26194976810829,2.57085885963423,2.87129103237098,2.57230678351403,2.20444583341944,2.75765635983006,2.20231761998777,4.59674417106676,5.52983519722476,2.63772575460388,2.8361169516747,4.16730696445408,4.74611098302348,3.37657566019008,5.65353516774197,3.24091444021034,1.85083185038834,1.86399445825301,2.27178579999552,2.19157524309678,0.579728977403356,0,0,0,0,0,1.54488862144927,8.01022516116871,8.05336614268893,6.00677276667578,4.64783285263046,7.69958864485907,5.09610479413291,28.4426681261332,3.68034769719064,3.54703811665138,4.04419556011827,3.53970027129086,1.8125651855302,2.07818994690755,0.867426633830679,0.608930956624282,0.922461989024234,0.904335843315735,1.52865319276416,3.01599819191221,2.71914464507811,0.144599356919912,0,1.7794353494215,0.662524555381181,1.45462575940567,7.45567044872489,2.04946557908083,3.14170060220183,5.10914110417183,1.31796636956512,1.19980546198682,0.508280908292259,7.48953197024113,4.11750542536764,3.64397621127307,9.03886464999838,7.41574826257959,4.77912502486988,5.67844420737152,0.407357455401265,1.61729061793121,1.76905930903572,1.47309299120532,1.82168620147785,1.60931473103431,0.900310649026746,1.05493372485001,1.2246569847239,0.768682321709099,0.655912071918102,1.55222022443409,1.94011193639558,1.89106080167819,1.23165786914764,1.09597866213787,1.11218899690239,1.39300866608867,0.823128545631774,0.995171334092466,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,1.89260953707715,2.77842453424068,8.59088835757875,2.3800550999719,1.91959425481711,2.55460339046482,1.03093969057675,2.21851877085677,2.2237804384487,2.09248188723815,6.64340686162316,2.9645811850322,1.25667604400135,1.79060824837036,2.9244613067868,2.69645822596266,6.91641759599022,6.17337947088538,1.51734320762465,1.37098215131675,0,1.83286195060783,1.55161989734101,1.8936671370386,2.02356918797623,1.77132177575523,2.35498091762062,2.09775178667061,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0.241177159752417,0.25462585178142,1.72617682470486,0.972811360650212,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,1.84753190166605,1.32643988239339,1.46668478797823,2.03694102930226,2.11221223459652,1.84256883185997,2.61848004974615,2.53673742215138,0.945810864637146,0.664394068946325,0.956728611944923,0.81931657357869,0.345369963731791,1.44649058581512,0,1.63171705145613,0.983528546038072,0.827810238914197,5.29816946959713,6.68106613575558,4.91804836130026,0.252470927204373,2.2085575359138,0.390438744296638,1.29254038639679,1.19484398976276,0.891194696329576,2.26461224631066,2.02405350837447,1.46127928955656,0.790575555893047,12.2102100240287,0.851640511249612,0.534196811001766,1.30309567482861,0.329940245945071,0,1.94224508923985,2.11626489875326,1.32023555829129,1.18120757152309,0.922305443831782,1.55056975900933,1.81766864738753,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,2.38307724027652,2.52085531643834,1.81102157295856,3.85806663056866,2.6601035046341,1.60531935841864,0.987294123612726,2.43571959291679,0.23467170806371,0.42366414172764,0.661585194164886,2.63818004706368,1.45317984026315,1.32688434841943,2.38744688006273,2.46211349617592,2.91480836629851,5.00648315428376,0.512612642393558,1.03193433981611,0.740778109478847,0,0.27338845544205,0.228778173206523,0.849892149969277,1.25956307091292,0.552799895217695,0,1.89801596148681,1.62655573701479,2.70013352054503,1.67270636811575,2.18362563746178,1.07891477107857,1.65306911450672,1.30877970992015,4.79575401179634,1.86401793926078,2.81846469342095,1.04661582230785,0.827292452285488,1.36115831840833,1.03327858782185,1.18269287843545,0.938857909166032,1.0416350787516,1.78260885523708,1.44950472495604,0.576060012515731,0.316011120628178,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0.680191150845634,0,0.448569283047378,0.839423081820392,1.35232715822533,0.563047426353546,0.549454872801795,1.2862102744744,0,3.95326289831947,3.22227665555024,1.71868654031819,2.06223818812425,4.7955776383945,6.0431511791176,4.05013500139084,5.85417564191487,8.15656336171568,6.21312374102184,2.49089634202024,2.79317411380722,1.02440163452481,1.21553358534147,0.838452650511929,1.65459157605013,0.666740183404846,1.03017528619447,1.92551525755089,1.76888048234658,0.760437899670719,0.754505365544305,1.31098110457835,1.28050304809739,1.55075766180156,1.90517476513229,1.15884325944855,1.54327376370964,1.64834360321323,1.17759136107518,0.342869252385415,1.59728225543404,1.1921809497366,1.0174249164263,1.41164070622996,1.4384483341585,1.28049581010941,0.789209134313529,1.7654534799962,2.24456908663095,1.30498519936592,1.47756723563345,0,1.70430525304563,0.771626443924566,0.249810577937946,1.40358965067245,0,1.53030665655075,0.882365676478062,0.695603506861264
|short_description=p5@Pak1
|short_description=p5@Pak1
}}
}}

Revision as of 20:35, 14 November 2012

Short description:p5@Pak1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Pak1_5end
Coexpression cluster:MCL_coexpression_mm9:1361
Association with transcript: 244bp_to_ENSMUST00000172423, uc009iju.1_5end
EntrezGene:Pak1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Pak1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B97.41
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell4.64e-1070
endo-epithelial cell1.25e-0915
epithelial cell1.29e-0725
intestinal epithelial cell9.72e-079
epithelial cell of alimentary canal9.72e-079

Uber anatomy
Ontology termp-valuen
nervous system5.45e-1575
regional part of nervous system1.30e-1454
central nervous system1.37e-1473
neural tube5.75e-1452
neural rod5.75e-1452
future spinal cord5.75e-1452
neural keel5.75e-1452
brain4.38e-1347
future brain4.38e-1347
ectoderm-derived structure8.87e-1395
ectoderm8.87e-1395
presumptive ectoderm8.87e-1395
regional part of brain1.87e-1246
intestine2.36e-1231
anterior neural tube3.05e-1140
ecto-epithelium5.00e-1173
neurectoderm9.04e-1164
neural plate9.04e-1164
presumptive neural plate9.04e-1164
regional part of forebrain1.13e-1039
forebrain1.13e-1039
future forebrain1.13e-1039
gray matter3.16e-1034
mucosa3.60e-1015
organ system subdivision1.85e-09194
brain grey matter2.54e-0929
regional part of telencephalon2.54e-0929
telencephalon2.54e-0929
intestinal mucosa3.42e-0913
wall of intestine3.42e-0913
gastrointestinal system mucosa3.42e-0913
pre-chordal neural plate1.28e-0849
gastrointestinal system5.22e-0847
simple columnar epithelium1.59e-0711
regional part of cerebral cortex9.12e-0717
epithelium of mucosa9.72e-079
gastrointestinal system epithelium9.72e-079
intestinal epithelium9.72e-079







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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