FFCP PHASE1:Mm9::chr3:29912271..29912291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:29912271..29912291,- | |id=chr3:29912271..29912291,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!6.60e-08!17;UBERON:0005181!6.60e-08!17;UBERON:0002224!6.60e-08!17;UBERON:0000915!6.60e-08!17;UBERON:0008947!6.60e-08!17;UBERON:0003258!6.60e-08!17;UBERON:0001008!1.24e-07!17;UBERON:0002113!1.46e-07!14;UBERON:0003918!1.46e-07!14;UBERON:0005095!1.46e-07!14;UBERON:0007687!1.46e-07!14;UBERON:0002048!1.68e-07!14;UBERON:0000117!1.68e-07!14;UBERON:0000171!1.68e-07!14;UBERON:0000170!1.68e-07!14;UBERON:0005597!1.68e-07!14;UBERON:0000118!1.68e-07!14;UBERON:0006554!2.65e-07!16 | |ontology_enrichment_uberon=UBERON:0005178!6.60e-08!17;UBERON:0005181!6.60e-08!17;UBERON:0002224!6.60e-08!17;UBERON:0000915!6.60e-08!17;UBERON:0008947!6.60e-08!17;UBERON:0003258!6.60e-08!17;UBERON:0001008!1.24e-07!17;UBERON:0002113!1.46e-07!14;UBERON:0003918!1.46e-07!14;UBERON:0005095!1.46e-07!14;UBERON:0007687!1.46e-07!14;UBERON:0002048!1.68e-07!14;UBERON:0000117!1.68e-07!14;UBERON:0000171!1.68e-07!14;UBERON:0000170!1.68e-07!14;UBERON:0005597!1.68e-07!14;UBERON:0000118!1.68e-07!14;UBERON:0006554!2.65e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.87e-17,14;UBERON:0003918,4.87e-17,14;UBERON:0011143,4.87e-17,14;UBERON:0005095,4.87e-17,14;UBERON:0007687,4.87e-17,14;UBERON:0006554,3.31e-13,18;UBERON:0001008,1.69e-12,19;UBERON:0000489,2.76e-11,21;UBERON:0002102,9.37e-10,7;UBERON:0004710,9.37e-10,7;UBERON:0005419,9.37e-10,7;UBERON:0005417,9.37e-10,7;UBERON:0005729,9.37e-10,7;UBERON:0010708,1.34e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0,0.505524445014783,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,8.40715172438085,9.26619792822314,2.28736461413134,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0,0.292399974850665,0,0,0,0.308713837137853,0,0,0,0,0.515469845288373,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.758671603812327,0.799739588268102,3.38123207019241,1.4255592949172,1.35766741017338,1.26244475802573,1.58091342810643,1.03327103585722,0.470996183524124,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0.678980343100753,0.469380496577004,1.50755631697634,1.42826184531608,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0,0,1.26534397432454,0.609958401380546,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,0.661227645802687,0,0.648074866458964,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.347652977834566,0,0.824171801606613,0.294397840268795,0,0.177475806159338,0.476872379894642,0,0.188218760830661,0,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0,0.505524445014783,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,8.40715172438085,9.26619792822314,2.28736461413134,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0,0.292399974850665,0,0,0,0.308713837137853,0,0,0,0,0.515469845288373,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.758671603812327,0.799739588268102,3.38123207019241,1.4255592949172,1.35766741017338,1.26244475802573,1.58091342810643,1.03327103585722,0.470996183524124,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0.678980343100753,0.469380496577004,1.50755631697634,1.42826184531608,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0,0,1.26534397432454,0.609958401380546,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,0.661227645802687,0,0.648074866458964,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.347652977834566,0,0.824171801606613,0.294397840268795,0,0.177475806159338,0.476872379894642,0,0.188218760830661,0,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | ||
|short_description=p16@Mecom | |short_description=p16@Mecom | ||
}} | }} |
Revision as of 07:54, 14 November 2012
Short description: | p16@Mecom |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Mecom_5end |
Coexpression cluster: | MCL_coexpression_mm9:262 |
Association with transcript: | 135bp_to_ENSMUST00000108270_5end |
EntrezGene: | Mecom |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 4.87e-17 | 14 |
kidney mesenchyme | 4.87e-17 | 14 |
upper urinary tract | 4.87e-17 | 14 |
kidney rudiment | 4.87e-17 | 14 |
kidney field | 4.87e-17 | 14 |
urinary system structure | 3.31e-13 | 18 |
renal system | 1.69e-12 | 19 |
cavitated compound organ | 2.76e-11 | 21 |
forelimb | 9.37e-10 | 7 |
pectoral appendage | 9.37e-10 | 7 |
pectoral appendage bud | 9.37e-10 | 7 |
forelimb bud | 9.37e-10 | 7 |
forelimb/pectoral fin field | 9.37e-10 | 7 |
pectoral complex | 1.34e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.