FFCP PHASE1:Mm9::chr4:23954947..23954957,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:23954947..23954957,+ | |id=chr4:23954947..23954957,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.03e-11,6;CL:0000556,2.03e-11,6;CL:0000050,1.76e-09,9;CL:0002027,4.00e-07,3;CL:0002006,4.00e-07,3;CL:0002024,4.00e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!5.92e-08!66 | |ontology_enrichment_uberon=UBERON:0009569!5.92e-08!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,5.48e-09,66;UBERON:0002106,5.63e-08,6;UBERON:0004457,5.63e-08,6;UBERON:0000042,5.63e-08,6;UBERON:0004854,5.63e-08,6;UBERON:0009034,5.63e-08,6;UBERON:0002095,5.63e-08,6;UBERON:0004782,5.63e-08,6;UBERON:0003281,5.63e-08,6;UBERON:0009664,5.63e-08,6;UBERON:0002296,5.63e-08,6;UBERON:0005602,5.63e-08,6;UBERON:0001179,5.63e-08,6;UBERON:0006293,5.63e-08,6;UBERON:0002107,9.71e-07,22;UBERON:0007499,9.71e-07,22;UBERON:0006925,9.71e-07,22;UBERON:0009497,9.71e-07,22;UBERON:0000015,9.71e-07,22;UBERON:0002423,9.71e-07,22;UBERON:0006235,9.71e-07,22;UBERON:0008835,9.71e-07,22;UBERON:0003894,9.71e-07,22;UBERON:0004161,9.71e-07,22;UBERON:0008836,9.71e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,6.32908547449759,16.1980213911861,18.1886088313318,2.68142840554502,1.50825876966313,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,1.3013942122792,0.884610551949874,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.414251545071004,0.469052119962192,1.08037236876609,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0.804820204198858,0,0,0.492502392237286,0.891756905004413,2.19299981137998,3.95190207523891,1.20785776884335,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,3.00321190288969,5.70021085828289,3.14806957338795,5.47722327748958,5.30589751455317,10.4396599230382,7.76779571117189,1.62135226775035,2.19649130550465,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0,1.66277871149944,0.37898282354097,0.651859905768103,0,0.704070744865506,0,0.952174563544055,1.17080188714679,1.26108115284953,1.7717175171902,0.159454768657487,5.57135270033509,2.59027472798843,4.62876987460837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890328018336276,0,0,0,0,0.302323556964751,0.754420319023592,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0.847328283455281,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,5.80960994712699,0.206386867963223,1.66675074632741,3.39063222608444,2.46049609897845,7.77845788902177,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853668028770671,4.61902762429759,1.25767897576789,1.10306105070008,1.33348036680969,1.23621034343337,0.962757628775446,2.02157769411038,1.2673964994512,1.32038438970253,1.21733959710847,0.320125762024346,0.229741875822453,0.952587382566147,0.695305955669133,0.964546102318525,1.23625770240992,0.441596760403192,3.08582327146874,1.06485483695602,1.1921809497366,1.45346416632329,0.752875043322645,0.846146078916765,1.28049581010941,1.31534855718921,0.950628796921032,1.68342681497322,0.474540072496697,0.492522411877817,1.63692417267876,0.77468420592983,1.73615949883027,0,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,6.32908547449759,16.1980213911861,18.1886088313318,2.68142840554502,1.50825876966313,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,1.3013942122792,0.884610551949874,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.414251545071004,0.469052119962192,1.08037236876609,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0.804820204198858,0,0,0.492502392237286,0.891756905004413,2.19299981137998,3.95190207523891,1.20785776884335,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,3.00321190288969,5.70021085828289,3.14806957338795,5.47722327748958,5.30589751455317,10.4396599230382,7.76779571117189,1.62135226775035,2.19649130550465,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0,1.66277871149944,0.37898282354097,0.651859905768103,0,0.704070744865506,0,0.952174563544055,1.17080188714679,1.26108115284953,1.7717175171902,0.159454768657487,5.57135270033509,2.59027472798843,4.62876987460837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890328018336276,0,0,0,0,0.302323556964751,0.754420319023592,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0.847328283455281,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,5.80960994712699,0.206386867963223,1.66675074632741,3.39063222608444,2.46049609897845,7.77845788902177,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853668028770671,4.61902762429759,1.25767897576789,1.10306105070008,1.33348036680969,1.23621034343337,0.962757628775446,2.02157769411038,1.2673964994512,1.32038438970253,1.21733959710847,0.320125762024346,0.229741875822453,0.952587382566147,0.695305955669133,0.964546102318525,1.23625770240992,0.441596760403192,3.08582327146874,1.06485483695602,1.1921809497366,1.45346416632329,0.752875043322645,0.846146078916765,1.28049581010941,1.31534855718921,0.950628796921032,1.68342681497322,0.474540072496697,0.492522411877817,1.63692417267876,0.77468420592983,1.73615949883027,0,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr4:23954947..23954957,+ | |short_description=p@chr4:23954947..23954957,+ | ||
}} | }} |
Revision as of 00:44, 14 November 2012
Short description: | p@chr4:23954947..23954957, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:23954947..23954957, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.03e-11 | 6 |
megakaryocyte | 2.03e-11 | 6 |
megakaryocyte-erythroid progenitor cell | 1.76e-09 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 4.00e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.00e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 5.48e-09 | 66 |
spleen | 5.63e-08 | 6 |
cavity lining | 5.63e-08 | 6 |
serous membrane | 5.63e-08 | 6 |
gastrointestinal system mesentery | 5.63e-08 | 6 |
stomach region | 5.63e-08 | 6 |
mesentery | 5.63e-08 | 6 |
gastrointestinal system serosa | 5.63e-08 | 6 |
mesentery of stomach | 5.63e-08 | 6 |
gut mesentery | 5.63e-08 | 6 |
dorsal mesentery | 5.63e-08 | 6 |
dorsal mesogastrium | 5.63e-08 | 6 |
peritoneal cavity | 5.63e-08 | 6 |
spleen primordium | 5.63e-08 | 6 |
liver | 9.71e-07 | 22 |
epithelial sac | 9.71e-07 | 22 |
digestive gland | 9.71e-07 | 22 |
epithelium of foregut-midgut junction | 9.71e-07 | 22 |
anatomical boundary | 9.71e-07 | 22 |
hepatobiliary system | 9.71e-07 | 22 |
foregut-midgut junction | 9.71e-07 | 22 |
hepatic diverticulum | 9.71e-07 | 22 |
liver primordium | 9.71e-07 | 22 |
septum transversum | 9.71e-07 | 22 |
liver bud | 9.71e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.