FFCP PHASE1:Mm9::chr11:20531724..20531728,-: Difference between revisions
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|id=chr11:20531724..20531728,- | |id=chr11:20531724..20531728,- | ||
|ontology_enrichment_celltype=CL:0000066!1.36e-08!25;CL:0000063!5.24e-08!66;CL:0002563!1.60e-07!9;CL:0002251!1.60e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.36e-08!25;CL:0000063!5.24e-08!66;CL:0002563!1.60e-07!9;CL:0002251!1.60e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-28,25;CL:0002563,2.72e-22,9;CL:0002251,2.72e-22,9;CL:0000223,8.74e-22,20;CL:0002076,2.39e-18,15;CL:0000075,8.14e-18,7;CL:0000239,8.17e-16,6;CL:0000677,8.17e-16,6;CL:0000584,8.17e-16,6;CL:0002250,4.69e-08,3;CL:0000682,4.69e-08,3;CL:0000034,7.71e-08,97;CL:0002321,2.86e-07,70;CL:0000624,4.35e-07,8;CL:0000723,8.17e-07,91;CL:0000048,8.17e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.60e-07!9;UBERON:0004808!1.60e-07!9;UBERON:0001277!1.60e-07!9;UBERON:0000485!1.99e-07!11 | |ontology_enrichment_uberon=UBERON:0003350!1.60e-07!9;UBERON:0004808!1.60e-07!9;UBERON:0001277!1.60e-07!9;UBERON:0000485!1.99e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.72e-22,9;UBERON:0004808,2.72e-22,9;UBERON:0001277,2.72e-22,9;UBERON:0000485,6.47e-22,11;UBERON:0001242,7.19e-15,13;UBERON:0001262,7.19e-15,13;UBERON:0004786,7.19e-15,13;UBERON:0000344,1.21e-12,15;UBERON:0000490,3.68e-09,66;UBERON:0003929,4.22e-08,55;UBERON:0004923,3.08e-07,24 | |||
|phase1_expression=0.160148847104794,9.42233600626275,8.18998630901165,16.030603199262,11.520601788766,1.51091344720701,2.33612640595526,1.03298658753261,1.97104211012333,1.87251621057595,0,0.159544317990673,1.02720437958723,0.961624426608971,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.397163804803541,0.261199789138935,0,0,4.59385571292016,1.7230479846363,1.29282739611533,0.380046838912748,0,0,7.62036808151557,7.38077745101484,0,3.17736781726402,1.16364251750945,4.49172583777212,1.25559489221072,0,1.0470474879476,2.35292595212406,1.36609096991689,0,0.755380907853464,0.811015449756117,0.367093504323363,0.782391344348039,0.218025156380447,0.659058548203415,0.58328969722285,0.139986421625363,0,0.167782606057736,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0.151143120213571,16.5222758559956,0,2.03991400112325,1.07940638327563,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,1.40843419776681,1.28326477414318,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0,0,0,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.958520996047362,2.99951365496704,0.762421362438388,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.90422890701429,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,1.28673953557358,1.42081749697796,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.405344047729279,0.584799949701329,1.09775057645525,0.671032093801859,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0,0.898819408654221,0.216138049874694,0.398282546508734,0.758671603812327,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.442830443938806,0.31399745568275,0.616985819609003,0,0,0,0.449724224769707,0.811440485554012,0.241177159752417,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0,0,0.505157755894224,0,0.482443521363367,0.184753190166605,0.37898282354097,0.325929952884052,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0.780877488593277,0.215423397732799,1.19484398976276,0.668396022247182,0.566153061577665,1.21443210502468,0,1.18586333383957,0,0.567760340833074,0.712262414669021,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0,0,0.608929898229199,0,0.21183207086382,0,0.65954501176592,0.322928853391811,0.241251699712623,0.119372344003136,0.492422699235184,0.291480836629851,0,0.170870880797853,0.412773735926445,0.925972636848558,0.565105371014073,0.820165366326151,0.457556346413045,0.679913719975421,1.53946597556024,1.52019971184866,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0.358053391334963,0,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0.604957110821043,0.584747284438515,0.288635524920988,0.350630706544707,0,0,0.358855426437903,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0,0.376437521661322,0,0.182927972872773,0,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.927471342481686 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|phase1_expression=0.160148847104794,9.42233600626275,8.18998630901165,16.030603199262,11.520601788766,1.51091344720701,2.33612640595526,1.03298658753261,1.97104211012333,1.87251621057595,0,0.159544317990673,1.02720437958723,0.961624426608971,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.397163804803541,0.261199789138935,0,0,4.59385571292016,1.7230479846363,1.29282739611533,0.380046838912748,0,0,7.62036808151557,7.38077745101484,0,3.17736781726402,1.16364251750945,4.49172583777212,1.25559489221072,0,1.0470474879476,2.35292595212406,1.36609096991689,0,0.755380907853464,0.811015449756117,0.367093504323363,0.782391344348039,0.218025156380447,0.659058548203415,0.58328969722285,0.139986421625363,0,0.167782606057736,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0.151143120213571,16.5222758559956,0,2.03991400112325,1.07940638327563,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,1.40843419776681,1.28326477414318,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0,0,0,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.958520996047362,2.99951365496704,0.762421362438388,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.90422890701429,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,1.28673953557358,1.42081749697796,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.405344047729279,0.584799949701329,1.09775057645525,0.671032093801859,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0,0.898819408654221,0.216138049874694,0.398282546508734,0.758671603812327,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.442830443938806,0.31399745568275,0.616985819609003,0,0,0,0.449724224769707,0.811440485554012,0.241177159752417,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0,0,0.505157755894224,0,0.482443521363367,0.184753190166605,0.37898282354097,0.325929952884052,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0.780877488593277,0.215423397732799,1.19484398976276,0.668396022247182,0.566153061577665,1.21443210502468,0,1.18586333383957,0,0.567760340833074,0.712262414669021,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0,0,0.608929898229199,0,0.21183207086382,0,0.65954501176592,0.322928853391811,0.241251699712623,0.119372344003136,0.492422699235184,0.291480836629851,0,0.170870880797853,0.412773735926445,0.925972636848558,0.565105371014073,0.820165366326151,0.457556346413045,0.679913719975421,1.53946597556024,1.52019971184866,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0.358053391334963,0,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0.604957110821043,0.584747284438515,0.288635524920988,0.350630706544707,0,0,0.358855426437903,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0,0.376437521661322,0,0.182927972872773,0,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.927471342481686 | ||
|short_description=p@chr11:20531724..20531728,- | |short_description=p@chr11:20531724..20531728,- | ||
}} | }} |
Revision as of 09:25, 14 November 2012
Short description: | p@chr11:20531724..20531728, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:20531724..20531728, - |
Coexpression cluster: | MCL_coexpression_mm9:441 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-28 | 25 |
intestinal epithelial cell | 2.72e-22 | 9 |
epithelial cell of alimentary canal | 2.72e-22 | 9 |
endodermal cell | 8.74e-22 | 20 |
endo-epithelial cell | 2.39e-18 | 15 |
columnar/cuboidal epithelial cell | 8.14e-18 | 7 |
brush border epithelial cell | 8.17e-16 | 6 |
gut absorptive cell | 8.17e-16 | 6 |
enterocyte | 8.17e-16 | 6 |
intestinal crypt stem cell | 4.69e-08 | 3 |
M cell of gut | 4.69e-08 | 3 |
stem cell | 7.71e-08 | 97 |
embryonic cell | 2.86e-07 | 70 |
CD4-positive, alpha-beta T cell | 4.35e-07 | 8 |
somatic stem cell | 8.17e-07 | 91 |
multi fate stem cell | 8.17e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.72e-22 | 9 |
gastrointestinal system epithelium | 2.72e-22 | 9 |
intestinal epithelium | 2.72e-22 | 9 |
simple columnar epithelium | 6.47e-22 | 11 |
intestinal mucosa | 7.19e-15 | 13 |
wall of intestine | 7.19e-15 | 13 |
gastrointestinal system mucosa | 7.19e-15 | 13 |
mucosa | 1.21e-12 | 15 |
unilaminar epithelium | 3.68e-09 | 66 |
gut epithelium | 4.22e-08 | 55 |
organ component layer | 3.08e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.