Personal tools

FFCP PHASE1:Mm9::chr6:129182951..129182973,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr6:129182951..129182973,-
|id=chr6:129182951..129182973,-
|ontology_enrichment_celltype=CL:0000988!6.07e-13!32;CL:0002032!6.07e-13!32;CL:0000037!6.07e-13!32;CL:0000566!6.07e-13!32;CL:0000837!6.07e-13!32;CL:0000838!2.80e-11!12;CL:0002031!8.77e-11!25;CL:0000084!2.10e-10!11;CL:0000827!2.10e-10!11;CL:0000542!5.62e-10!13;CL:0000051!5.62e-10!13;CL:0002320!7.87e-10!46;CL:0000134!7.87e-10!46;CL:0000791!7.61e-09!9;CL:0000789!7.61e-09!9;CL:0002420!7.61e-09!9;CL:0002419!7.61e-09!9;CL:0000790!7.61e-09!9;CL:0000738!1.14e-08!17;CL:0002087!1.14e-08!17;CL:0000624!4.88e-08!8;CL:0000219!4.19e-07!54
|ontology_enrichment_celltype=CL:0000988!6.07e-13!32;CL:0002032!6.07e-13!32;CL:0000037!6.07e-13!32;CL:0000566!6.07e-13!32;CL:0000837!6.07e-13!32;CL:0000838!2.80e-11!12;CL:0002031!8.77e-11!25;CL:0000084!2.10e-10!11;CL:0000827!2.10e-10!11;CL:0000542!5.62e-10!13;CL:0000051!5.62e-10!13;CL:0002320!7.87e-10!46;CL:0000134!7.87e-10!46;CL:0000791!7.61e-09!9;CL:0000789!7.61e-09!9;CL:0002420!7.61e-09!9;CL:0002419!7.61e-09!9;CL:0000790!7.61e-09!9;CL:0000738!1.14e-08!17;CL:0002087!1.14e-08!17;CL:0000624!4.88e-08!8;CL:0000219!4.19e-07!54
|ontology_enrichment_celltype_v019_2=CL:0000838,1.73e-20,12;CL:0000084,8.77e-19,11;CL:0000827,8.77e-19,11;CL:0000542,1.21e-18,13;CL:0000051,1.21e-18,13;CL:0002031,3.63e-17,25;CL:0000791,9.56e-16,9;CL:0000789,9.56e-16,9;CL:0002420,9.56e-16,9;CL:0002419,9.56e-16,9;CL:0000790,9.56e-16,9;CL:0000988,1.18e-15,32;CL:0002032,1.18e-15,32;CL:0000037,1.18e-15,32;CL:0000837,1.18e-15,32;CL:0000738,1.42e-15,17;CL:0002087,1.42e-15,17;CL:0000624,3.54e-14,8;CL:0002320,1.53e-11,46;CL:0000134,1.53e-11,46;CL:0000893,4.19e-11,6;CL:0002489,4.19e-11,6;CL:0000898,4.19e-11,6;CL:0000809,4.19e-11,6;CL:0000810,4.19e-11,6;CL:0000895,4.19e-11,6;CL:0000808,4.19e-11,6;CL:0000894,4.19e-11,6;CL:0000806,4.19e-11,6;CL:0000807,4.19e-11,6;CL:0000805,4.19e-11,6;CL:0002425,4.19e-11,6;CL:0002436,4.19e-11,6;CL:0002427,4.19e-11,6;CL:0002428,4.19e-11,6;CL:0002429,4.19e-11,6;CL:0002433,4.19e-11,6;CL:0002431,4.19e-11,6;CL:0002432,4.19e-11,6;CL:0000219,5.61e-09,54;CL:0000034,2.07e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!9.23e-16!48;UBERON:0002390!6.07e-14!45;UBERON:0003061!6.07e-14!45;UBERON:0002405!1.76e-11!70;UBERON:0004177!2.47e-11!29;UBERON:0003081!3.64e-11!88;UBERON:0001004!7.75e-10!42;UBERON:0002384!7.87e-10!46;UBERON:0003408!1.39e-09!24;UBERON:0000065!2.31e-09!41;UBERON:0002370!4.54e-09!23;UBERON:0000974!4.54e-09!23;UBERON:0004807!4.54e-09!23;UBERON:0005058!4.54e-09!23;UBERON:0003351!4.54e-09!23;UBERON:0009113!4.54e-09!23;UBERON:0003295!4.54e-09!23;UBERON:0009722!4.54e-09!23;UBERON:0005562!4.54e-09!23;UBERON:0007690!4.54e-09!23;UBERON:0000072!1.82e-08!27;UBERON:0006562!2.21e-08!24;UBERON:0001557!2.21e-08!24;UBERON:0001042!2.21e-08!24;UBERON:0008814!2.21e-08!24;UBERON:0009145!2.21e-08!24;UBERON:0005057!4.67e-07!51
|ontology_enrichment_uberon=UBERON:0002193!9.23e-16!48;UBERON:0002390!6.07e-14!45;UBERON:0003061!6.07e-14!45;UBERON:0002405!1.76e-11!70;UBERON:0004177!2.47e-11!29;UBERON:0003081!3.64e-11!88;UBERON:0001004!7.75e-10!42;UBERON:0002384!7.87e-10!46;UBERON:0003408!1.39e-09!24;UBERON:0000065!2.31e-09!41;UBERON:0002370!4.54e-09!23;UBERON:0000974!4.54e-09!23;UBERON:0004807!4.54e-09!23;UBERON:0005058!4.54e-09!23;UBERON:0003351!4.54e-09!23;UBERON:0009113!4.54e-09!23;UBERON:0003295!4.54e-09!23;UBERON:0009722!4.54e-09!23;UBERON:0005562!4.54e-09!23;UBERON:0007690!4.54e-09!23;UBERON:0000072!1.82e-08!27;UBERON:0006562!2.21e-08!24;UBERON:0001557!2.21e-08!24;UBERON:0001042!2.21e-08!24;UBERON:0008814!2.21e-08!24;UBERON:0009145!2.21e-08!24;UBERON:0005057!4.67e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.40e-12,48;UBERON:0002405,2.40e-12,48;UBERON:0002384,1.53e-11,46;UBERON:0002390,7.78e-10,45;UBERON:0003061,7.78e-10,45;UBERON:0004177,4.67e-08,29;UBERON:0005057,4.67e-08,29;UBERON:0000077,3.56e-07,35
|phase1_expression=0,0,0,0,0,0.16787927191189,0.700837921786577,7.48915275961142,36.6050677594334,20.8317428426574,20.3749382188351,12.8433175982492,4.45121897821135,3.3219752919219,0.999329285446988,2.83465374345756,0.699561878128147,10.567982539501,9.59801035240171,6.79023442876848,0.17008658030214,5.46100231604869,8.61959304158487,1.11994695955385,1.60586496747019,0,0.430761996159075,0,1.14014051673824,0.252030129759931,1.55211357458713,0,0,0,0,0,0,6.69650609179052,3.1253413780952,8.89990364755457,16.4704816648684,6.83045484958446,12.1377588257788,0.503587271902309,1.01376931219515,1.46837401729345,0,0,0,0,0,0,13.4226084846189,7.25362142011344,8.4023449785616,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,3.76823835312181,0.860423876981386,0,0,0,0,0.561777680527007,0.681721290312231,0.519572009205738,1.06001872353102,0,0,0,0,0.432982082022428,0,1.01104889002957,0.45673551887624,6.47344709117929,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0,1.10420759230197,2.42437626567611,1.86391761218122,0,0,1.53274233125155,3.11519323715393,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,1.99051152976149,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,2.80885274925294,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,2.87536413054709,0,0.624075346229121,0,0,0,2.21703828199926,0,0,0,0,0.335012514883631,0.476087281772027,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,1.03610989119537,1.01254341007058,1.50791283939272,0,0,0,0,0,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,2.10837217149998,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.882113592219848,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,4.61351378154202,0,0.925972636848558,1.50694765603753,3.8274383761887,3.66045077130436,6.4591803397665,4.61839792668071,2.9021994498929,0,0,0,0,0,0.218362563746178,0,0,0,1.03691978633434,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.202725215290164,0.616265742988964,0.77952493786677,0.895133478337407,0.596044064343795,1.44234539423963,0.590758108698309,0.706765149637033,0.381034033274999,0.705783295957884,0.779663045918019,1.25075394132428,2.68816875017609,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0,0.382576664137687,0,0
|phase1_expression=0,0,0,0,0,0.16787927191189,0.700837921786577,7.48915275961142,36.6050677594334,20.8317428426574,20.3749382188351,12.8433175982492,4.45121897821135,3.3219752919219,0.999329285446988,2.83465374345756,0.699561878128147,10.567982539501,9.59801035240171,6.79023442876848,0.17008658030214,5.46100231604869,8.61959304158487,1.11994695955385,1.60586496747019,0,0.430761996159075,0,1.14014051673824,0.252030129759931,1.55211357458713,0,0,0,0,0,0,6.69650609179052,3.1253413780952,8.89990364755457,16.4704816648684,6.83045484958446,12.1377588257788,0.503587271902309,1.01376931219515,1.46837401729345,0,0,0,0,0,0,13.4226084846189,7.25362142011344,8.4023449785616,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,3.76823835312181,0.860423876981386,0,0,0,0,0.561777680527007,0.681721290312231,0.519572009205738,1.06001872353102,0,0,0,0,0.432982082022428,0,1.01104889002957,0.45673551887624,6.47344709117929,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0,1.10420759230197,2.42437626567611,1.86391761218122,0,0,1.53274233125155,3.11519323715393,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,1.99051152976149,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,2.80885274925294,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,2.87536413054709,0,0.624075346229121,0,0,0,2.21703828199926,0,0,0,0,0.335012514883631,0.476087281772027,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,1.03610989119537,1.01254341007058,1.50791283939272,0,0,0,0,0,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,2.10837217149998,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.882113592219848,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,4.61351378154202,0,0.925972636848558,1.50694765603753,3.8274383761887,3.66045077130436,6.4591803397665,4.61839792668071,2.9021994498929,0,0,0,0,0,0.218362563746178,0,0,0,1.03691978633434,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.202725215290164,0.616265742988964,0.77952493786677,0.895133478337407,0.596044064343795,1.44234539423963,0.590758108698309,0.706765149637033,0.381034033274999,0.705783295957884,0.779663045918019,1.25075394132428,2.68816875017609,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0,0.382576664137687,0,0
|short_description=p@chr6:129182951..129182973,-
|short_description=p@chr6:129182951..129182973,-
}}
}}

Revision as of 17:31, 13 November 2012

Short description:p@chr6:129182951..129182973, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:129182951..129182973, -
Coexpression cluster:MCL_coexpression_mm9:1066
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr6:129182951..129182973-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E736.61
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.84
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.62
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.73e-2012
T cell8.77e-1911
pro-T cell8.77e-1911
lymphocyte1.21e-1813
common lymphoid progenitor1.21e-1813
hematopoietic lineage restricted progenitor cell3.63e-1725
mature alpha-beta T cell9.56e-169
alpha-beta T cell9.56e-169
immature T cell9.56e-169
mature T cell9.56e-169
immature alpha-beta T cell9.56e-169
hematopoietic cell1.18e-1532
hematopoietic oligopotent progenitor cell1.18e-1532
hematopoietic stem cell1.18e-1532
hematopoietic multipotent progenitor cell1.18e-1532
leukocyte1.42e-1517
nongranular leukocyte1.42e-1517
CD4-positive, alpha-beta T cell3.54e-148
connective tissue cell1.53e-1146
mesenchymal cell1.53e-1146
thymocyte4.19e-116
double negative thymocyte4.19e-116
naive T cell4.19e-116
double-positive, alpha-beta thymocyte4.19e-116
CD4-positive, alpha-beta thymocyte4.19e-116
naive thymus-derived CD4-positive, alpha-beta T cell4.19e-116
DN4 thymocyte4.19e-116
DN1 thymic pro-T cell4.19e-116
DN2 thymocyte4.19e-116
DN3 thymocyte4.19e-116
immature single positive thymocyte4.19e-116
early T lineage precursor4.19e-116
mature CD4 single-positive thymocyte4.19e-116
resting double-positive thymocyte4.19e-116
double-positive blast4.19e-116
CD69-positive double-positive thymocyte4.19e-116
CD69-positive, CD4-positive single-positive thymocyte4.19e-116
CD4-positive, CD8-intermediate double-positive thymocyte4.19e-116
CD24-positive, CD4 single-positive thymocyte4.19e-116
motile cell5.61e-0954
stem cell2.07e-0797

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.40e-1248
immune system2.40e-1248
connective tissue1.53e-1146
hematopoietic system7.78e-1045
blood island7.78e-1045
hemopoietic organ4.67e-0829
immune organ4.67e-0829
mixed endoderm/mesoderm-derived structure3.56e-0735







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:129182951..129182973,-&oldid=2268087"