FFCP PHASE1:Mm9::chr2:156571561..156571577,+: Difference between revisions
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|id=chr2:156571561..156571577,+ | |id=chr2:156571561..156571577,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.85e-08!43;CL:0000055!7.75e-08!50;CL:0000117!1.17e-07!23;CL:0000337!1.17e-07!23;CL:0000221!1.69e-07!44;CL:0000133!1.69e-07!44 | |ontology_enrichment_celltype=CL:0002319!5.85e-08!43;CL:0000055!7.75e-08!50;CL:0000117!1.17e-07!23;CL:0000337!1.17e-07!23;CL:0000221!1.69e-07!44;CL:0000133!1.69e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-29,23;CL:0000337,1.26e-29,23;CL:0002319,8.59e-21,43;CL:0000221,2.83e-20,44;CL:0000133,2.83e-20,44;CL:0000540,3.87e-20,33;CL:0000047,3.87e-20,33;CL:0000031,3.87e-20,33;CL:0000404,3.87e-20,33;CL:0000393,8.98e-17,39;CL:0000211,8.98e-17,39;CL:0000120,9.20e-16,3;CL:0002609,9.65e-14,6;CL:0002321,5.61e-12,70;CL:0002612,1.13e-07,3;CL:0002613,1.32e-07,3;CL:0000723,2.12e-07,91;CL:0000048,2.12e-07,91;CL:0000034,8.14e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.90e-09!34;UBERON:0000073!1.41e-07!75;UBERON:0001016!1.41e-07!75;UBERON:0001017!5.00e-07!73;UBERON:0005743!5.00e-07!73;UBERON:0000956!6.26e-07!21;UBERON:0001869!6.26e-07!21;UBERON:0000203!6.26e-07!21;UBERON:0004121!9.54e-07!102;UBERON:0000924!9.54e-07!102;UBERON:0006601!9.54e-07!102 | |ontology_enrichment_uberon=UBERON:0002020!4.90e-09!34;UBERON:0000073!1.41e-07!75;UBERON:0001016!1.41e-07!75;UBERON:0001017!5.00e-07!73;UBERON:0005743!5.00e-07!73;UBERON:0000956!6.26e-07!21;UBERON:0001869!6.26e-07!21;UBERON:0000203!6.26e-07!21;UBERON:0004121!9.54e-07!102;UBERON:0000924!9.54e-07!102;UBERON:0006601!9.54e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.43e-16,34;UBERON:0001017,2.52e-15,73;UBERON:0001016,7.42e-15,75;UBERON:0001049,5.43e-12,52;UBERON:0005068,5.43e-12,52;UBERON:0006241,5.43e-12,52;UBERON:0007135,5.43e-12,52;UBERON:0000073,1.76e-11,54;UBERON:0004121,3.05e-11,95;UBERON:0000924,3.05e-11,95;UBERON:0006601,3.05e-11,95;UBERON:0003528,3.93e-10,29;UBERON:0002791,3.93e-10,29;UBERON:0001893,3.93e-10,29;UBERON:0001948,1.81e-09,5;UBERON:0002315,1.81e-09,5;UBERON:0002346,2.10e-09,64;UBERON:0003075,2.10e-09,64;UBERON:0007284,2.10e-09,64;UBERON:0000956,3.39e-08,21;UBERON:0001869,3.39e-08,21;UBERON:0000203,3.39e-08,21;UBERON:0010371,5.12e-08,73;UBERON:0002240,5.70e-08,6;UBERON:0005174,5.70e-08,6;UBERON:0001137,5.70e-08,6;UBERON:0002257,1.13e-07,3;UBERON:0002616,1.41e-07,46;UBERON:0000955,2.17e-07,47;UBERON:0006238,2.17e-07,47;UBERON:0002780,2.79e-07,39;UBERON:0001890,2.79e-07,39;UBERON:0006240,2.79e-07,39;UBERON:0003080,4.49e-07,40 | |||
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| ||
|short_description=p16@Dlgap4 | |short_description=p16@Dlgap4 | ||
}} | }} |
Revision as of 12:06, 14 November 2012
Short description: | p16@Dlgap4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Dlgap4_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000127944, ENSMUST00000146412_5end |
EntrezGene: | Dlgap4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.26e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-29 | 23 |
neural cell | 8.59e-21 | 43 |
ectodermal cell | 2.83e-20 | 44 |
neurectodermal cell | 2.83e-20 | 44 |
neuron | 3.87e-20 | 33 |
neuronal stem cell | 3.87e-20 | 33 |
neuroblast | 3.87e-20 | 33 |
electrically signaling cell | 3.87e-20 | 33 |
electrically responsive cell | 8.98e-17 | 39 |
electrically active cell | 8.98e-17 | 39 |
granule cell | 9.20e-16 | 3 |
neuron of cerebral cortex | 9.65e-14 | 6 |
embryonic cell | 5.61e-12 | 70 |
neuron of the ventral spinal cord | 1.13e-07 | 3 |
striatum neuron | 1.32e-07 | 3 |
somatic stem cell | 2.12e-07 | 91 |
multi fate stem cell | 2.12e-07 | 91 |
stem cell | 8.14e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.43e-16 | 34 |
central nervous system | 2.52e-15 | 73 |
nervous system | 7.42e-15 | 75 |
neural tube | 5.43e-12 | 52 |
neural rod | 5.43e-12 | 52 |
future spinal cord | 5.43e-12 | 52 |
neural keel | 5.43e-12 | 52 |
regional part of nervous system | 1.76e-11 | 54 |
ectoderm-derived structure | 3.05e-11 | 95 |
ectoderm | 3.05e-11 | 95 |
presumptive ectoderm | 3.05e-11 | 95 |
brain grey matter | 3.93e-10 | 29 |
regional part of telencephalon | 3.93e-10 | 29 |
telencephalon | 3.93e-10 | 29 |
regional part of spinal cord | 1.81e-09 | 5 |
gray matter of spinal cord | 1.81e-09 | 5 |
neurectoderm | 2.10e-09 | 64 |
neural plate | 2.10e-09 | 64 |
presumptive neural plate | 2.10e-09 | 64 |
cerebral cortex | 3.39e-08 | 21 |
cerebral hemisphere | 3.39e-08 | 21 |
pallium | 3.39e-08 | 21 |
ecto-epithelium | 5.12e-08 | 73 |
spinal cord | 5.70e-08 | 6 |
dorsal region element | 5.70e-08 | 6 |
dorsum | 5.70e-08 | 6 |
ventral horn of spinal cord | 1.13e-07 | 3 |
regional part of brain | 1.41e-07 | 46 |
brain | 2.17e-07 | 47 |
future brain | 2.17e-07 | 47 |
regional part of forebrain | 2.79e-07 | 39 |
forebrain | 2.79e-07 | 39 |
future forebrain | 2.79e-07 | 39 |
anterior neural tube | 4.49e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.