FFCP PHASE1:Mm9::chr15:76353005..76353021,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr15:76353005..76353021,- | |id=chr15:76353005..76353021,- | ||
|ontology_enrichment_celltype=CL:0000540!3.17e-20!33;CL:0000047!3.17e-20!33;CL:0000031!3.17e-20!33;CL:0000404!3.17e-20!33;CL:0000221!4.24e-17!44;CL:0000133!4.24e-17!44;CL:0002319!1.22e-16!43;CL:0000117!1.65e-16!23;CL:0000337!1.65e-16!23;CL:0000393!7.02e-15!39;CL:0000211!7.02e-15!39;CL:0000055!3.40e-12!50 | |ontology_enrichment_celltype=CL:0000540!3.17e-20!33;CL:0000047!3.17e-20!33;CL:0000031!3.17e-20!33;CL:0000404!3.17e-20!33;CL:0000221!4.24e-17!44;CL:0000133!4.24e-17!44;CL:0002319!1.22e-16!43;CL:0000117!1.65e-16!23;CL:0000337!1.65e-16!23;CL:0000393!7.02e-15!39;CL:0000211!7.02e-15!39;CL:0000055!3.40e-12!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.50e-26,33;CL:0000047,6.50e-26,33;CL:0000031,6.50e-26,33;CL:0000404,6.50e-26,33;CL:0000117,1.98e-23,23;CL:0000337,1.98e-23,23;CL:0000393,2.33e-20,39;CL:0000211,2.33e-20,39;CL:0000221,2.40e-19,44;CL:0000133,2.40e-19,44;CL:0002319,1.05e-18,43;CL:0002321,1.47e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.92e-39!75;UBERON:0001016!8.92e-39!75;UBERON:0004121!1.21e-38!102;UBERON:0000924!1.21e-38!102;UBERON:0006601!1.21e-38!102;UBERON:0001017!2.48e-38!73;UBERON:0005743!2.48e-38!73;UBERON:0002346!1.46e-36!71;UBERON:0003075!1.46e-36!71;UBERON:0007284!1.46e-36!71;UBERON:0000033!6.95e-32!63;UBERON:0001049!1.26e-28!52;UBERON:0005068!1.26e-28!52;UBERON:0006241!1.26e-28!52;UBERON:0007135!1.26e-28!52;UBERON:0000955!8.18e-28!50;UBERON:0006238!8.18e-28!50;UBERON:0002616!5.90e-27!49;UBERON:0003056!2.55e-26!49;UBERON:0003080!1.79e-21!40;UBERON:0002780!1.32e-20!39;UBERON:0001890!1.32e-20!39;UBERON:0006240!1.32e-20!39;UBERON:0002020!1.72e-20!34;UBERON:0002791!3.83e-17!29;UBERON:0003528!3.83e-17!29;UBERON:0001893!3.83e-17!29;UBERON:0007811!1.10e-16!86;UBERON:0000153!2.18e-14!94;UBERON:0000956!1.37e-11!21;UBERON:0001869!1.37e-11!21;UBERON:0000203!1.37e-11!21;UBERON:0002619!2.98e-09!17;UBERON:0002021!1.13e-08!10;UBERON:0000411!1.13e-08!10;UBERON:0001950!1.13e-08!10;UBERON:0003076!1.44e-07!12;UBERON:0003057!1.44e-07!12;UBERON:0002420!7.11e-07!8;UBERON:0007245!7.11e-07!8;UBERON:0010009!7.11e-07!8;UBERON:0010011!7.11e-07!8;UBERON:0000454!7.11e-07!8 | |ontology_enrichment_uberon=UBERON:0000073!8.92e-39!75;UBERON:0001016!8.92e-39!75;UBERON:0004121!1.21e-38!102;UBERON:0000924!1.21e-38!102;UBERON:0006601!1.21e-38!102;UBERON:0001017!2.48e-38!73;UBERON:0005743!2.48e-38!73;UBERON:0002346!1.46e-36!71;UBERON:0003075!1.46e-36!71;UBERON:0007284!1.46e-36!71;UBERON:0000033!6.95e-32!63;UBERON:0001049!1.26e-28!52;UBERON:0005068!1.26e-28!52;UBERON:0006241!1.26e-28!52;UBERON:0007135!1.26e-28!52;UBERON:0000955!8.18e-28!50;UBERON:0006238!8.18e-28!50;UBERON:0002616!5.90e-27!49;UBERON:0003056!2.55e-26!49;UBERON:0003080!1.79e-21!40;UBERON:0002780!1.32e-20!39;UBERON:0001890!1.32e-20!39;UBERON:0006240!1.32e-20!39;UBERON:0002020!1.72e-20!34;UBERON:0002791!3.83e-17!29;UBERON:0003528!3.83e-17!29;UBERON:0001893!3.83e-17!29;UBERON:0007811!1.10e-16!86;UBERON:0000153!2.18e-14!94;UBERON:0000956!1.37e-11!21;UBERON:0001869!1.37e-11!21;UBERON:0000203!1.37e-11!21;UBERON:0002619!2.98e-09!17;UBERON:0002021!1.13e-08!10;UBERON:0000411!1.13e-08!10;UBERON:0001950!1.13e-08!10;UBERON:0003076!1.44e-07!12;UBERON:0003057!1.44e-07!12;UBERON:0002420!7.11e-07!8;UBERON:0007245!7.11e-07!8;UBERON:0010009!7.11e-07!8;UBERON:0010011!7.11e-07!8;UBERON:0000454!7.11e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.77e-44,73;UBERON:0004121,9.81e-44,95;UBERON:0000924,9.81e-44,95;UBERON:0006601,9.81e-44,95;UBERON:0002346,7.66e-43,64;UBERON:0003075,7.66e-43,64;UBERON:0007284,7.66e-43,64;UBERON:0001016,2.66e-42,75;UBERON:0010371,6.45e-37,73;UBERON:0000073,7.36e-36,54;UBERON:0001049,3.95e-33,52;UBERON:0005068,3.95e-33,52;UBERON:0006241,3.95e-33,52;UBERON:0007135,3.95e-33,52;UBERON:0003056,7.51e-31,49;UBERON:0002020,5.42e-30,34;UBERON:0000955,4.87e-28,47;UBERON:0006238,4.87e-28,47;UBERON:0002616,6.81e-27,46;UBERON:0010314,8.59e-27,92;UBERON:0003528,4.58e-25,29;UBERON:0002791,4.58e-25,29;UBERON:0001893,4.58e-25,29;UBERON:0003080,5.85e-24,40;UBERON:0002780,8.98e-23,39;UBERON:0001890,8.98e-23,39;UBERON:0006240,8.98e-23,39;UBERON:0000956,6.92e-17,21;UBERON:0001869,6.92e-17,21;UBERON:0000203,6.92e-17,21;UBERON:0002619,1.88e-13,17;UBERON:0002021,5.78e-12,10;UBERON:0000411,5.78e-12,10;UBERON:0001950,5.78e-12,10;UBERON:0003076,2.14e-09,12;UBERON:0003057,2.14e-09,12;UBERON:0002420,2.44e-09,8;UBERON:0007245,2.44e-09,8;UBERON:0010009,2.44e-09,8;UBERON:0010011,2.44e-09,8;UBERON:0000454,2.44e-09,8;UBERON:0000025,6.27e-08,114;UBERON:0000970,1.71e-07,9;UBERON:0000019,1.71e-07,9;UBERON:0000047,1.71e-07,9;UBERON:0010312,1.71e-07,9;UBERON:0004088,1.71e-07,9;UBERON:0002104,1.71e-07,9;UBERON:0001456,1.71e-07,9;UBERON:0003072,1.71e-07,9;UBERON:0004128,1.71e-07,9;UBERON:0003071,1.71e-07,9;UBERON:0002240,3.09e-07,6;UBERON:0005174,3.09e-07,6;UBERON:0001137,3.09e-07,6;UBERON:0004111,3.62e-07,122 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,15.578367486189,13.2247744818008,15.2119536841483,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,3.62913643079672,6.34527910158946,6.30974884054146,11.4260393761521,10.3808214247258,8.32937434661688,5.75072826109418,5.51531271966013,40.7428759697738,52.9902453053529,50.0757298415354,9.89147157976454,6.86157327018072,8.85552729946492,37.4105218661851,22.5105044012672,20.6277634498694,10.0173719061047,8.96941589034349,11.5567656411686,0.37863096666592,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,0,0,0,0.5709193985953,0,1.1875371125186,0.693941307064543,0.304465478312141,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,17.5668478206928,23.6674778699204,0,0,0,0,32.3547781114417,25.1625331550245,7.53926112677186,27.4642425903797,20.9686675010871,31.7915708176127,21.415846724944,0,0,0,2.52530227063769,1.17108398666433,2.5289231487682,3.96136685571768,3.61691562805716,4.55844544313897,5.50888997224854,5.43470002446427,8.01980449290949,0,0.189106080167819,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3511662451813,2.88132914661996,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,38.0504898271067,33.5225423653701,0,0,1.26203287766503,1.95219372148319,4.30846795465598,0.716906393857656,1.55959071857676,1.13230612315533,3.23848561339915,2.63030272120181,1.58115111178609,22.8138134659483,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,4.08527526904546,0.540183282093931,0.646793418913773,0.643011105094777,0.354680467284547,1.60531935841864,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,34.6745314759653,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5073071211291,17.0320337507655,14.8952833494243,10.3111909406213,21.9226406326606,25.6833925112498,14.1754725048679,19.3638117386415,23.5634052671786,27.9590568345983,7.9916257639816,9.57659696162474,2.56100408631201,1.21553358534147,1.46729213839588,1.47074806760011,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,1.54327376370964,0.824171801606613,0.294397840268795,1.02860775715625,0.177475806159338,0.715308569841963,0.872078499793971,0.846984423737976,1.26921911837515,0.73171189149109,1.57841826862706,0.543216455383447,0.561142271657738,0.711810108745045,1.18205378850676,0,0.464810523557898,0.578719832943424,2.49810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,15.578367486189,13.2247744818008,15.2119536841483,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,3.62913643079672,6.34527910158946,6.30974884054146,11.4260393761521,10.3808214247258,8.32937434661688,5.75072826109418,5.51531271966013,40.7428759697738,52.9902453053529,50.0757298415354,9.89147157976454,6.86157327018072,8.85552729946492,37.4105218661851,22.5105044012672,20.6277634498694,10.0173719061047,8.96941589034349,11.5567656411686,0.37863096666592,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,0,0,0,0.5709193985953,0,1.1875371125186,0.693941307064543,0.304465478312141,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,17.5668478206928,23.6674778699204,0,0,0,0,32.3547781114417,25.1625331550245,7.53926112677186,27.4642425903797,20.9686675010871,31.7915708176127,21.415846724944,0,0,0,2.52530227063769,1.17108398666433,2.5289231487682,3.96136685571768,3.61691562805716,4.55844544313897,5.50888997224854,5.43470002446427,8.01980449290949,0,0.189106080167819,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3511662451813,2.88132914661996,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,38.0504898271067,33.5225423653701,0,0,1.26203287766503,1.95219372148319,4.30846795465598,0.716906393857656,1.55959071857676,1.13230612315533,3.23848561339915,2.63030272120181,1.58115111178609,22.8138134659483,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,4.08527526904546,0.540183282093931,0.646793418913773,0.643011105094777,0.354680467284547,1.60531935841864,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,34.6745314759653,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5073071211291,17.0320337507655,14.8952833494243,10.3111909406213,21.9226406326606,25.6833925112498,14.1754725048679,19.3638117386415,23.5634052671786,27.9590568345983,7.9916257639816,9.57659696162474,2.56100408631201,1.21553358534147,1.46729213839588,1.47074806760011,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,1.54327376370964,0.824171801606613,0.294397840268795,1.02860775715625,0.177475806159338,0.715308569841963,0.872078499793971,0.846984423737976,1.26921911837515,0.73171189149109,1.57841826862706,0.543216455383447,0.561142271657738,0.711810108745045,1.18205378850676,0,0.464810523557898,0.578719832943424,2.49810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0 | ||
|short_description=p2@Scrt1 | |short_description=p2@Scrt1 | ||
}} | }} |
Revision as of 22:02, 14 November 2012
Short description: | p2@Scrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -446bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end |
EntrezGene: | Scrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.50e-26 | 33 |
neuronal stem cell | 6.50e-26 | 33 |
neuroblast | 6.50e-26 | 33 |
electrically signaling cell | 6.50e-26 | 33 |
CNS neuron (sensu Vertebrata) | 1.98e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-23 | 23 |
electrically responsive cell | 2.33e-20 | 39 |
electrically active cell | 2.33e-20 | 39 |
ectodermal cell | 2.40e-19 | 44 |
neurectodermal cell | 2.40e-19 | 44 |
neural cell | 1.05e-18 | 43 |
embryonic cell | 1.47e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.