FFCP PHASE1:Mm9::chr1:194979315..194979359,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:194979315..194979359,+ | |id=chr1:194979315..194979359,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.79e-09!25;CL:0002563!8.22e-07!9;CL:0002251!8.22e-07!9 | |ontology_enrichment_celltype=CL:0000066!9.79e-09!25;CL:0002563!8.22e-07!9;CL:0002251!8.22e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.21e-09,25;CL:0002563,5.81e-07,9;CL:0002251,5.81e-07,9;CL:0000223,7.88e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.75e-20!128;UBERON:0001555!1.75e-20!128;UBERON:0007026!1.75e-20!128;UBERON:0004119!2.67e-20!130;UBERON:0000925!2.67e-20!130;UBERON:0006595!2.67e-20!130;UBERON:0000160!1.28e-19!43;UBERON:0004921!3.13e-19!126;UBERON:0004185!3.13e-19!126;UBERON:0005409!4.35e-18!59;UBERON:0000344!1.36e-10!15;UBERON:0001242!2.50e-09!13;UBERON:0000060!2.50e-09!13;UBERON:0001262!2.50e-09!13;UBERON:0004786!2.50e-09!13;UBERON:0000485!2.18e-07!11;UBERON:0003350!8.22e-07!9;UBERON:0004808!8.22e-07!9;UBERON:0001277!8.22e-07!9 | |ontology_enrichment_uberon=UBERON:0001007!1.75e-20!128;UBERON:0001555!1.75e-20!128;UBERON:0007026!1.75e-20!128;UBERON:0004119!2.67e-20!130;UBERON:0000925!2.67e-20!130;UBERON:0006595!2.67e-20!130;UBERON:0000160!1.28e-19!43;UBERON:0004921!3.13e-19!126;UBERON:0004185!3.13e-19!126;UBERON:0005409!4.35e-18!59;UBERON:0000344!1.36e-10!15;UBERON:0001242!2.50e-09!13;UBERON:0000060!2.50e-09!13;UBERON:0001262!2.50e-09!13;UBERON:0004786!2.50e-09!13;UBERON:0000485!2.18e-07!11;UBERON:0003350!8.22e-07!9;UBERON:0004808!8.22e-07!9;UBERON:0001277!8.22e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.07e-17,31;UBERON:0001007,6.15e-17,116;UBERON:0001555,6.15e-17,116;UBERON:0007026,6.15e-17,116;UBERON:0004119,9.37e-17,118;UBERON:0000925,9.37e-17,118;UBERON:0006595,9.37e-17,118;UBERON:0004921,9.00e-16,114;UBERON:0005409,3.60e-15,47;UBERON:0000344,7.49e-11,15;UBERON:0001242,1.50e-09,13;UBERON:0001262,1.50e-09,13;UBERON:0004786,1.50e-09,13;UBERON:0000485,1.48e-07,11;UBERON:0003350,5.81e-07,9;UBERON:0004808,5.81e-07,9;UBERON:0001277,5.81e-07,9 | |||
|phase1_expression=14.2532473923267,168.904097297451,190.189682064826,157.886318302165,171.306339641651,92.1657202796275,92.9778309570192,3.09895976259783,1.83025338797167,0.936258105287974,1.02730780935303,0.0797721589953364,4.79362043807376,0.699363219351979,0,0.202475267389826,0,0.946386496074713,0.411343300817216,0,12.5013636522073,0,0,98.5553324407385,88.7813917729948,141.83529513641,125.351740882291,112.475983462034,110.783653543066,104.844533980131,64.745309111349,1.90509202037889,0,0,42.4611881034374,49.3716896714722,43.2839035276223,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.55994568650145,1.43752564364972,0.167782606057736,5.80289713609076,4.7053131879945,0,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,0,0.46081959976873,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.763991238884051,0.883885756421003,0.142371680799103,0.186399445825301,0.151452386666368,0.529000920747499,22.6094301187309,10.3250865237766,10.1995700056163,29.6836755400799,29.8897152025928,25.9855594516455,16.1511083151515,0,0,0,50.1402574404983,0,0,0,82.2665955842614,86.9024338579588,80.8839112023653,35.9679221115039,1.29468941823586,0.445326417194474,1.90833859442749,1.82679286987285,1.84492397804847,0.904335843315735,0.940709657085638,1.25666591329675,70.6977607720309,1.44599356919912,0,1.94120219936891,0.220841518460394,0.484875253135222,48.4618579167118,0,0.83778682725382,65.3970061333994,0.11981512450592,0.599902730993408,0.254140454146129,0.599162557619291,0.457500602818626,0,0.695297280769106,0.511430914660661,0.41557608911912,0.648965052271031,8.55450656342657,6.59356944233493,25.0195530849338,16.6249066150314,2.47228841629137,4.59804208866946,6.84236093260327,7.08312643827861,4.69451844144162,3.07472928683639,3.93547243150861,6.72628763921441,5.17363183038821,3.9712276835242,6.68614271823006,10.5213951565236,18.0730711996639,23.3328951569852,23.4591635505056,3.18454826909589,0,0,0,0.828503090142008,0.703578179943289,1.98068267607116,4.97163944728941,2.95146347621106,2.00547246753592,2.09280550275367,3.48755421819505,2.21854150497622,2.96207729844265,2.62667942526552,1.78351381000883,2.33919979880532,0.658650345873152,1.47627060636409,0.630869845692382,0,100.116891244091,55.7990695660078,5.54549451391608,11.3795969211615,32.4746002531675,39.9333378754218,46.254633119733,46.605278397577,63.5868942469646,44.1393198660349,40.9676390344439,44.1683367931355,47.3762731699462,58.4232615625244,62.896172513536,66.9114678134674,6.44870863240478,3.42745537829186,5.63538678365402,7.73875045812194,11.2492442557223,9.88915060453492,11.5090497566148,10.1851002105925,14.1298855057237,13.6970851953199,13.6368208460088,1.00107063429656,1.57247196090562,1.34917267430912,1.82574109249653,3.85883455603867,5.60176873919124,12.9463261852865,6.32327384422638,14.5517548989683,12.9391385874619,10.0478055870496,19.6583734062173,16.1650481886152,30.8563551257689,30.8763853672555,14.4107488329952,2.84237117655727,4.72598431681875,5.43184274480602,5.39787571063555,9.71536293162531,12.6163129669587,16.1960927721973,7.56648691709717,7.75126413770712,7.65382889555938,7.86543910635542,11.7425787668809,12.150520920847,0,0,19.1788066477424,18.4877620024171,0.321101179975584,0.117211686592203,0,0.504941854408746,3.15508219416257,3.51394869866975,0,5.73525115086125,2.00518806674155,1.98153571552183,0,0.584511715822624,0.790575555893047,0.642642632843614,11.2132667314532,6.05423052468668,9.44744364250741,30.6844428728916,26.5490276679926,10.4395673546642,8.46505959501303,11.3163047853539,11.5167738223501,15.0643222492524,24.550687850981,21.4484900391728,20.6768479463138,18.3301319602773,46.3841877729995,34.0347292719017,20.7668159509811,4.50152735078276,7.37344497561701,10.502514716548,11.1724347194632,6.59964625127661,8.72109809191241,9.74287837166718,3.05073220482823,6.35496212591461,47.8546623779267,57.2155297706936,36.4909604332747,50.7834827895072,56.1050016814741,63.0301055021035,52.758031430003,0.18542530201051,0,3.09580301944834,0.370389054739423,0,0.136694227721025,0.686334519619568,3.39956859987711,3.07893195112048,2.9021994498929,29.5947891584685,6.16855187483214,23.3817387195876,25.4892604339451,33.6632156583295,27.2953204682722,24.6801753884222,28.7634025924169,42.9279744853809,62.9928770198113,40.3870553506502,0.56369293868419,0.448549638131936,0.496375471371293,2.52786544847262,3.09983576346555,2.36538575687089,1.29092962510329,4.4269490846943,0.943734099831398,0.241584120826006,1.15212002503146,4.4241556887945,12.5689633479902,9.34669710199928,1.68897069871134,2.50637373934474,7.74857283646933,4.08664528367894,3.69223817936443,4.2405908978222,3.88654713940499,4.13387359061046,5.26272555994663,4.71438024037614,3.85693777199178,31.062062555284,7.76950836809226,1.16628013592318,6.71538465456314,21.0576657495088,9.19644129710792,28.9379566342279,80.6025105337288,61.6933687963497,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,1.03552062350364,4.15149390336707,3.99024873401031,3.58540572083682,8.265628380322,7.33646069197938,14.3397936591011,9.11211583986622,9.06554251851134,10.9112531261217,9.09709962349671,14.4483200937437,5.47016390019621,9.55143376192801,10.3720746895888,10.4532553499216,13.8125170472091,10.7772423128716,11.1887347868949,13.5988347265091,10.745521169811,10.6289468239479,9.9386451449229,10.4911923576821,11.3370204973216,11.104906889009,9.13837765230106,11.1586063452391,9.47050961176234,10.4569167661314,11.7839877048125,10.4398815949273,10.835493061312,16.7784727699573,9.76102099471586,12.346023102793,14.7388240983388,15.2055545489515,15.2558448374292,4.97349663378993,8.6030653456611,1.62307484934295 | |phase1_expression=14.2532473923267,168.904097297451,190.189682064826,157.886318302165,171.306339641651,92.1657202796275,92.9778309570192,3.09895976259783,1.83025338797167,0.936258105287974,1.02730780935303,0.0797721589953364,4.79362043807376,0.699363219351979,0,0.202475267389826,0,0.946386496074713,0.411343300817216,0,12.5013636522073,0,0,98.5553324407385,88.7813917729948,141.83529513641,125.351740882291,112.475983462034,110.783653543066,104.844533980131,64.745309111349,1.90509202037889,0,0,42.4611881034374,49.3716896714722,43.2839035276223,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.55994568650145,1.43752564364972,0.167782606057736,5.80289713609076,4.7053131879945,0,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,0,0.46081959976873,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.763991238884051,0.883885756421003,0.142371680799103,0.186399445825301,0.151452386666368,0.529000920747499,22.6094301187309,10.3250865237766,10.1995700056163,29.6836755400799,29.8897152025928,25.9855594516455,16.1511083151515,0,0,0,50.1402574404983,0,0,0,82.2665955842614,86.9024338579588,80.8839112023653,35.9679221115039,1.29468941823586,0.445326417194474,1.90833859442749,1.82679286987285,1.84492397804847,0.904335843315735,0.940709657085638,1.25666591329675,70.6977607720309,1.44599356919912,0,1.94120219936891,0.220841518460394,0.484875253135222,48.4618579167118,0,0.83778682725382,65.3970061333994,0.11981512450592,0.599902730993408,0.254140454146129,0.599162557619291,0.457500602818626,0,0.695297280769106,0.511430914660661,0.41557608911912,0.648965052271031,8.55450656342657,6.59356944233493,25.0195530849338,16.6249066150314,2.47228841629137,4.59804208866946,6.84236093260327,7.08312643827861,4.69451844144162,3.07472928683639,3.93547243150861,6.72628763921441,5.17363183038821,3.9712276835242,6.68614271823006,10.5213951565236,18.0730711996639,23.3328951569852,23.4591635505056,3.18454826909589,0,0,0,0.828503090142008,0.703578179943289,1.98068267607116,4.97163944728941,2.95146347621106,2.00547246753592,2.09280550275367,3.48755421819505,2.21854150497622,2.96207729844265,2.62667942526552,1.78351381000883,2.33919979880532,0.658650345873152,1.47627060636409,0.630869845692382,0,100.116891244091,55.7990695660078,5.54549451391608,11.3795969211615,32.4746002531675,39.9333378754218,46.254633119733,46.605278397577,63.5868942469646,44.1393198660349,40.9676390344439,44.1683367931355,47.3762731699462,58.4232615625244,62.896172513536,66.9114678134674,6.44870863240478,3.42745537829186,5.63538678365402,7.73875045812194,11.2492442557223,9.88915060453492,11.5090497566148,10.1851002105925,14.1298855057237,13.6970851953199,13.6368208460088,1.00107063429656,1.57247196090562,1.34917267430912,1.82574109249653,3.85883455603867,5.60176873919124,12.9463261852865,6.32327384422638,14.5517548989683,12.9391385874619,10.0478055870496,19.6583734062173,16.1650481886152,30.8563551257689,30.8763853672555,14.4107488329952,2.84237117655727,4.72598431681875,5.43184274480602,5.39787571063555,9.71536293162531,12.6163129669587,16.1960927721973,7.56648691709717,7.75126413770712,7.65382889555938,7.86543910635542,11.7425787668809,12.150520920847,0,0,19.1788066477424,18.4877620024171,0.321101179975584,0.117211686592203,0,0.504941854408746,3.15508219416257,3.51394869866975,0,5.73525115086125,2.00518806674155,1.98153571552183,0,0.584511715822624,0.790575555893047,0.642642632843614,11.2132667314532,6.05423052468668,9.44744364250741,30.6844428728916,26.5490276679926,10.4395673546642,8.46505959501303,11.3163047853539,11.5167738223501,15.0643222492524,24.550687850981,21.4484900391728,20.6768479463138,18.3301319602773,46.3841877729995,34.0347292719017,20.7668159509811,4.50152735078276,7.37344497561701,10.502514716548,11.1724347194632,6.59964625127661,8.72109809191241,9.74287837166718,3.05073220482823,6.35496212591461,47.8546623779267,57.2155297706936,36.4909604332747,50.7834827895072,56.1050016814741,63.0301055021035,52.758031430003,0.18542530201051,0,3.09580301944834,0.370389054739423,0,0.136694227721025,0.686334519619568,3.39956859987711,3.07893195112048,2.9021994498929,29.5947891584685,6.16855187483214,23.3817387195876,25.4892604339451,33.6632156583295,27.2953204682722,24.6801753884222,28.7634025924169,42.9279744853809,62.9928770198113,40.3870553506502,0.56369293868419,0.448549638131936,0.496375471371293,2.52786544847262,3.09983576346555,2.36538575687089,1.29092962510329,4.4269490846943,0.943734099831398,0.241584120826006,1.15212002503146,4.4241556887945,12.5689633479902,9.34669710199928,1.68897069871134,2.50637373934474,7.74857283646933,4.08664528367894,3.69223817936443,4.2405908978222,3.88654713940499,4.13387359061046,5.26272555994663,4.71438024037614,3.85693777199178,31.062062555284,7.76950836809226,1.16628013592318,6.71538465456314,21.0576657495088,9.19644129710792,28.9379566342279,80.6025105337288,61.6933687963497,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,1.03552062350364,4.15149390336707,3.99024873401031,3.58540572083682,8.265628380322,7.33646069197938,14.3397936591011,9.11211583986622,9.06554251851134,10.9112531261217,9.09709962349671,14.4483200937437,5.47016390019621,9.55143376192801,10.3720746895888,10.4532553499216,13.8125170472091,10.7772423128716,11.1887347868949,13.5988347265091,10.745521169811,10.6289468239479,9.9386451449229,10.4911923576821,11.3370204973216,11.104906889009,9.13837765230106,11.1586063452391,9.47050961176234,10.4569167661314,11.7839877048125,10.4398815949273,10.835493061312,16.7784727699573,9.76102099471586,12.346023102793,14.7388240983388,15.2055545489515,15.2558448374292,4.97349663378993,8.6030653456611,1.62307484934295 | ||
|short_description=p1@Irf6 | |short_description=p1@Irf6 | ||
}} | }} |
Revision as of 14:43, 14 November 2012
Short description: | p1@Irf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Irf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2301 |
Association with transcript: | 9bp_to_ENSMUST00000076521, ENSMUST00000138826, NM_016851, uc007edx.1, uc007edy.1_5end |
EntrezGene: | Irf6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.21e-09 | 25 |
intestinal epithelial cell | 5.81e-07 | 9 |
epithelial cell of alimentary canal | 5.81e-07 | 9 |
endodermal cell | 7.88e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.07e-17 | 31 |
digestive system | 6.15e-17 | 116 |
digestive tract | 6.15e-17 | 116 |
primitive gut | 6.15e-17 | 116 |
endoderm-derived structure | 9.37e-17 | 118 |
endoderm | 9.37e-17 | 118 |
presumptive endoderm | 9.37e-17 | 118 |
subdivision of digestive tract | 9.00e-16 | 114 |
gastrointestinal system | 3.60e-15 | 47 |
mucosa | 7.49e-11 | 15 |
intestinal mucosa | 1.50e-09 | 13 |
wall of intestine | 1.50e-09 | 13 |
gastrointestinal system mucosa | 1.50e-09 | 13 |
simple columnar epithelium | 1.48e-07 | 11 |
epithelium of mucosa | 5.81e-07 | 9 |
gastrointestinal system epithelium | 5.81e-07 | 9 |
intestinal epithelium | 5.81e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.