FFCP PHASE1:Mm9::chr12:28023108..28023115,-: Difference between revisions
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|id=chr12:28023108..28023115,- | |id=chr12:28023108..28023115,- | ||
|ontology_enrichment_celltype=CL:0000540!8.03e-17!33;CL:0000047!8.03e-17!33;CL:0000031!8.03e-17!33;CL:0000404!8.03e-17!33;CL:0000393!3.07e-13!39;CL:0000211!3.07e-13!39;CL:0000117!1.35e-11!23;CL:0000337!1.35e-11!23;CL:0002319!2.00e-11!43;CL:0000221!5.04e-11!44;CL:0000133!5.04e-11!44;CL:0000055!5.62e-09!50;CL:0002609!1.08e-07!6;CL:0000107!3.11e-07!9 | |ontology_enrichment_celltype=CL:0000540!8.03e-17!33;CL:0000047!8.03e-17!33;CL:0000031!8.03e-17!33;CL:0000404!8.03e-17!33;CL:0000393!3.07e-13!39;CL:0000211!3.07e-13!39;CL:0000117!1.35e-11!23;CL:0000337!1.35e-11!23;CL:0002319!2.00e-11!43;CL:0000221!5.04e-11!44;CL:0000133!5.04e-11!44;CL:0000055!5.62e-09!50;CL:0002609!1.08e-07!6;CL:0000107!3.11e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-37,23;CL:0000337,1.13e-37,23;CL:0002609,1.17e-31,6;CL:0000540,4.81e-26,33;CL:0000047,4.81e-26,33;CL:0000031,4.81e-26,33;CL:0000404,4.81e-26,33;CL:0002613,3.03e-22,3;CL:0000393,6.41e-22,39;CL:0000211,6.41e-22,39;CL:0000120,8.23e-22,3;CL:0002319,8.33e-20,43;CL:0000221,2.45e-19,44;CL:0000133,2.45e-19,44;CL:0002321,7.99e-12,70;CL:0002608,4.61e-11,3;CL:0000723,7.27e-09,91;CL:0000048,7.27e-09,91;CL:0000034,2.99e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.16e-09!102;UBERON:0000924!5.16e-09!102;UBERON:0006601!5.16e-09!102;UBERON:0001017!1.21e-08!73;UBERON:0005743!1.21e-08!73;UBERON:0000073!3.22e-08!75;UBERON:0001016!3.22e-08!75;UBERON:0002346!3.33e-08!71;UBERON:0003075!3.33e-08!71;UBERON:0007284!3.33e-08!71;UBERON:0002410!3.11e-07!9 | |ontology_enrichment_uberon=UBERON:0004121!5.16e-09!102;UBERON:0000924!5.16e-09!102;UBERON:0006601!5.16e-09!102;UBERON:0001017!1.21e-08!73;UBERON:0005743!1.21e-08!73;UBERON:0000073!3.22e-08!75;UBERON:0001016!3.22e-08!75;UBERON:0002346!3.33e-08!71;UBERON:0003075!3.33e-08!71;UBERON:0007284!3.33e-08!71;UBERON:0002410!3.11e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.57e-20,29;UBERON:0002791,4.57e-20,29;UBERON:0001893,4.57e-20,29;UBERON:0002020,5.11e-17,34;UBERON:0002780,9.56e-15,39;UBERON:0001890,9.56e-15,39;UBERON:0006240,9.56e-15,39;UBERON:0003080,2.33e-14,40;UBERON:0000369,1.27e-13,5;UBERON:0002435,1.27e-13,5;UBERON:0000204,1.27e-13,5;UBERON:0010082,1.27e-13,5;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0000956,9.29e-13,21;UBERON:0001869,9.29e-13,21;UBERON:0000203,9.29e-13,21;UBERON:0002616,2.17e-12,46;UBERON:0000955,4.13e-12,47;UBERON:0006238,4.13e-12,47;UBERON:0003056,1.39e-11,49;UBERON:0001049,7.17e-11,52;UBERON:0005068,7.17e-11,52;UBERON:0006241,7.17e-11,52;UBERON:0007135,7.17e-11,52;UBERON:0000073,1.94e-10,54;UBERON:0001954,3.03e-10,7;UBERON:0003022,3.03e-10,7;UBERON:0002421,3.03e-10,7;UBERON:0000349,3.03e-10,7;UBERON:0002600,3.03e-10,7;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002420,9.74e-09,8;UBERON:0007245,9.74e-09,8;UBERON:0010009,9.74e-09,8;UBERON:0010011,9.74e-09,8;UBERON:0000454,9.74e-09,8;UBERON:0002346,1.11e-08,64;UBERON:0003075,1.11e-08,64;UBERON:0007284,1.11e-08,64;UBERON:0010371,1.67e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.00699875694585,2.97013064329719,3.78584930432488,0,0.220868540951614,1.83736198822431,3.45043695665651,0,0,0,0,1.58263545276233,1.82975287204819,1.56274011167028,0,0,0,0,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0.378212160335639,0,0.219195732427575,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74937841044784,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0,0.170733605754134,0,0,0,0.666740183404846,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.00699875694585,2.97013064329719,3.78584930432488,0,0.220868540951614,1.83736198822431,3.45043695665651,0,0,0,0,1.58263545276233,1.82975287204819,1.56274011167028,0,0,0,0,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0.378212160335639,0,0.219195732427575,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74937841044784,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0,0.170733605754134,0,0,0,0.666740183404846,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr12:28023108..28023115,- | |short_description=p@chr12:28023108..28023115,- | ||
}} | }} |
Revision as of 05:31, 15 November 2012
Short description: | p@chr12:28023108..28023115, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28023108..28023115, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-37 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-37 | 23 |
neuron of cerebral cortex | 1.17e-31 | 6 |
neuron | 4.81e-26 | 33 |
neuronal stem cell | 4.81e-26 | 33 |
neuroblast | 4.81e-26 | 33 |
electrically signaling cell | 4.81e-26 | 33 |
striatum neuron | 3.03e-22 | 3 |
electrically responsive cell | 6.41e-22 | 39 |
electrically active cell | 6.41e-22 | 39 |
granule cell | 8.23e-22 | 3 |
neural cell | 8.33e-20 | 43 |
ectodermal cell | 2.45e-19 | 44 |
neurectodermal cell | 2.45e-19 | 44 |
embryonic cell | 7.99e-12 | 70 |
hippocampal neuron | 4.61e-11 | 3 |
somatic stem cell | 7.27e-09 | 91 |
multi fate stem cell | 7.27e-09 | 91 |
stem cell | 2.99e-08 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.