FFCP PHASE1:Hg19::chr5:121412666..121412683,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.77e-39!180;CL:0000057!3.65e-28!75;CL:0000680!2.37e-17!57;CL:0000056!2.37e-17!57;CL:0000355!2.37e-17!57;CL:0000187!9.82e-16!54;CL:0000183!2.48e-14!59;CL:0000222!6.92e-14!119;CL:0000393!1.74e-13!60;CL:0000211!1.74e-13!60;CL:0000192!6.82e-13!42;CL:0000514!6.82e-13!42;CL:0000359!1.30e-12!32;CL:0002620!3.64e-12!23;CL:0000048!3.93e-12!430;CL:0000723!8.39e-12!436;CL:0000034!3.30e-11!444;CL:0000144!7.16e-11!625;CL:0002334!2.10e-10!12;CL:0002371!2.38e-09!591;CL:0000548!1.30e-08!679;CL:0000004!1.30e-08!679;CL:0000255!1.30e-08!679;CL:0000012!2.93e-08!682;CL:0002494!2.91e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.77e-39!180;CL:0000057!3.65e-28!75;CL:0000680!2.37e-17!57;CL:0000056!2.37e-17!57;CL:0000355!2.37e-17!57;CL:0000187!9.82e-16!54;CL:0000183!2.48e-14!59;CL:0000222!6.92e-14!119;CL:0000393!1.74e-13!60;CL:0000211!1.74e-13!60;CL:0000192!6.82e-13!42;CL:0000514!6.82e-13!42;CL:0000359!1.30e-12!32;CL:0002620!3.64e-12!23;CL:0000048!3.93e-12!430;CL:0000723!8.39e-12!436;CL:0000034!3.30e-11!444;CL:0000144!7.16e-11!625;CL:0002334!2.10e-10!12;CL:0002371!2.38e-09!591;CL:0000548!1.30e-08!679;CL:0000004!1.30e-08!679;CL:0000255!1.30e-08!679;CL:0000012!2.93e-08!682;CL:0002494!2.91e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.06e-15;12!CL:0002620;5.28e-15;23!CL:0000057;5.68e-11;73!CL:0000359;3.04e-09;32!CL:0002539;5.88e-09;10!CL:0000192;7.87e-09;43!CL:0000134;9.95e-08;55!CL:0002320;1.91e-07;188!CL:0000048;7.68e-07;58 | |ontology_enrichment_celltype_v019=CL:0002334;1.06e-15;12!CL:0002620;5.28e-15;23!CL:0000057;5.68e-11;73!CL:0000359;3.04e-09;32!CL:0002539;5.88e-09;10!CL:0000192;7.87e-09;43!CL:0000134;9.95e-08;55!CL:0002320;1.91e-07;188!CL:0000048;7.68e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-29,76;CL:0000048,3.43e-17,427;CL:0000723,1.73e-16,433;CL:0002334,1.37e-15,12;CL:0000034,1.39e-15,441;CL:0002620,7.37e-15,23;CL:0000680,7.79e-12,58;CL:0000056,7.79e-12,58;CL:0000355,7.79e-12,58;CL:0000192,2.83e-11,43;CL:0000514,2.83e-11,43;CL:0000187,6.06e-10,55;CL:0000359,2.30e-09,32;CL:0000393,5.32e-09,61;CL:0000211,5.32e-09,61;CL:0002539,6.95e-09,10;CL:0000134,2.57e-08,354;CL:0000222,4.31e-08,121;CL:0002320,9.76e-08,361 | |||
|ontology_enrichment_development_v019=CL:0000514;7.87e-09;43!CL:0000355;9.71e-07;58 | |ontology_enrichment_development_v019=CL:0000514;7.87e-09;43!CL:0000355;9.71e-07;58 | ||
|ontology_enrichment_disease=DOID:2394!1.80e-08!14 | |ontology_enrichment_disease=DOID:2394!1.80e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.58e-13;14!DOID:17;1.73e-07;5!DOID:450;1.73e-07;5!DOID:66;1.73e-07;5!DOID:423;1.73e-07;5!DOID:0080000;1.73e-07;5!DOID:11722;1.73e-07;5 | |ontology_enrichment_disease_v019=DOID:2394;5.58e-13;14!DOID:17;1.73e-07;5!DOID:450;1.73e-07;5!DOID:66;1.73e-07;5!DOID:423;1.73e-07;5!DOID:0080000;1.73e-07;5!DOID:11722;1.73e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.87e-13,14;DOID:17,1.76e-07,5;DOID:450,1.76e-07,5;DOID:66,1.76e-07,5;DOID:423,1.76e-07,5;DOID:0080000,1.76e-07,5;DOID:11722,1.76e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.43e-16!70;UBERON:0000914!9.31e-16!83;UBERON:0002329!9.31e-16!83;UBERON:0003077!9.31e-16!83;UBERON:0003059!9.31e-16!83;UBERON:0007282!9.31e-16!83;UBERON:0009618!9.31e-16!83;UBERON:0007285!9.31e-16!83;UBERON:0001134!4.55e-15!61;UBERON:0002036!4.55e-15!61;UBERON:0003082!4.55e-15!61;UBERON:0002385!4.72e-14!63;UBERON:0001015!4.72e-14!63;UBERON:0000383!4.72e-14!63;UBERON:0002049!9.41e-14!79;UBERON:0007798!9.41e-14!79;UBERON:0004872!1.06e-13!84;UBERON:0000486!2.14e-13!82;UBERON:0004535!1.35e-12!110;UBERON:0001009!1.08e-11!113;UBERON:0001637!1.47e-11!42;UBERON:0003509!1.47e-11!42;UBERON:0004572!1.47e-11!42;UBERON:0000055!6.26e-11!69;UBERON:0005256!1.04e-10!143;UBERON:0001981!1.40e-10!60;UBERON:0007500!1.40e-10!60;UBERON:0004537!1.40e-10!60;UBERON:0006965!1.40e-10!60;UBERON:0003914!2.40e-09!118;UBERON:0002100!1.27e-08!216;UBERON:0004573!2.14e-08!33;UBERON:0004571!2.14e-08!33;UBERON:0000490!4.77e-08!138;UBERON:0002199!6.14e-08!45;UBERON:0002416!6.14e-08!45;UBERON:0002097!2.23e-07!40 | |ontology_enrichment_uberon=UBERON:0004290!4.43e-16!70;UBERON:0000914!9.31e-16!83;UBERON:0002329!9.31e-16!83;UBERON:0003077!9.31e-16!83;UBERON:0003059!9.31e-16!83;UBERON:0007282!9.31e-16!83;UBERON:0009618!9.31e-16!83;UBERON:0007285!9.31e-16!83;UBERON:0001134!4.55e-15!61;UBERON:0002036!4.55e-15!61;UBERON:0003082!4.55e-15!61;UBERON:0002385!4.72e-14!63;UBERON:0001015!4.72e-14!63;UBERON:0000383!4.72e-14!63;UBERON:0002049!9.41e-14!79;UBERON:0007798!9.41e-14!79;UBERON:0004872!1.06e-13!84;UBERON:0000486!2.14e-13!82;UBERON:0004535!1.35e-12!110;UBERON:0001009!1.08e-11!113;UBERON:0001637!1.47e-11!42;UBERON:0003509!1.47e-11!42;UBERON:0004572!1.47e-11!42;UBERON:0000055!6.26e-11!69;UBERON:0005256!1.04e-10!143;UBERON:0001981!1.40e-10!60;UBERON:0007500!1.40e-10!60;UBERON:0004537!1.40e-10!60;UBERON:0006965!1.40e-10!60;UBERON:0003914!2.40e-09!118;UBERON:0002100!1.27e-08!216;UBERON:0004573!2.14e-08!33;UBERON:0004571!2.14e-08!33;UBERON:0000490!4.77e-08!138;UBERON:0002199!6.14e-08!45;UBERON:0002416!6.14e-08!45;UBERON:0002097!2.23e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.48e-10;9!UBERON:0000042;4.48e-10;9!UBERON:0004573;1.16e-09;33!UBERON:0004571;1.16e-09;33!UBERON:0001135;2.19e-09;15!UBERON:0003688;5.50e-09;6!UBERON:0002358;5.50e-09;6!UBERON:0003684;5.50e-09;6!UBERON:0001178;5.50e-09;6!UBERON:0004237;5.88e-09;10!UBERON:0004695;5.88e-09;10!UBERON:0002111;5.88e-09;10!UBERON:0004178;5.88e-09;10!UBERON:0001637;6.30e-09;42!UBERON:0003509;6.30e-09;42!UBERON:0004572;6.30e-09;42!UBERON:0002097;1.94e-08;41!UBERON:0002199;2.45e-08;46!UBERON:0002416;2.45e-08;46!UBERON:0000947;8.01e-08;21!UBERON:0010191;8.01e-08;21!UBERON:0002384;1.22e-07;198!UBERON:0002118;9.20e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0004457;4.48e-10;9!UBERON:0000042;4.48e-10;9!UBERON:0004573;1.16e-09;33!UBERON:0004571;1.16e-09;33!UBERON:0001135;2.19e-09;15!UBERON:0003688;5.50e-09;6!UBERON:0002358;5.50e-09;6!UBERON:0003684;5.50e-09;6!UBERON:0001178;5.50e-09;6!UBERON:0004237;5.88e-09;10!UBERON:0004695;5.88e-09;10!UBERON:0002111;5.88e-09;10!UBERON:0004178;5.88e-09;10!UBERON:0001637;6.30e-09;42!UBERON:0003509;6.30e-09;42!UBERON:0004572;6.30e-09;42!UBERON:0002097;1.94e-08;41!UBERON:0002199;2.45e-08;46!UBERON:0002416;2.45e-08;46!UBERON:0000947;8.01e-08;21!UBERON:0010191;8.01e-08;21!UBERON:0002384;1.22e-07;198!UBERON:0002118;9.20e-07;5 | ||
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| ||
|short_description=p9@LOX | |short_description=p9@LOX | ||
}} | }} |
Revision as of 08:08, 21 November 2012
Short description: | p9@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_LOX_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | 122bp_to_uc011cwk.1_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-29 | 76 |
multi fate stem cell | 3.43e-17 | 427 |
somatic stem cell | 1.73e-16 | 433 |
preadipocyte | 1.37e-15 | 12 |
stem cell | 1.39e-15 | 441 |
skin fibroblast | 7.37e-15 | 23 |
muscle precursor cell | 7.79e-12 | 58 |
myoblast | 7.79e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-12 | 58 |
smooth muscle cell | 2.83e-11 | 43 |
smooth muscle myoblast | 2.83e-11 | 43 |
muscle cell | 6.06e-10 | 55 |
vascular associated smooth muscle cell | 2.30e-09 | 32 |
electrically responsive cell | 5.32e-09 | 61 |
electrically active cell | 5.32e-09 | 61 |
aortic smooth muscle cell | 6.95e-09 | 10 |
mesenchymal cell | 2.57e-08 | 354 |
mesodermal cell | 4.31e-08 | 121 |
connective tissue cell | 9.76e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.87e-13 | 14 |
musculoskeletal system disease | 1.76e-07 | 5 |
myotonic disease | 1.76e-07 | 5 |
muscle tissue disease | 1.76e-07 | 5 |
myopathy | 1.76e-07 | 5 |
muscular disease | 1.76e-07 | 5 |
myotonic dystrophy | 1.76e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.