FFCP PHASE1:Hg19::chr3:150264734..150264749,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000012!1.80e-14!682;CL:0000548!1.43e-13!679;CL:0000004!1.43e-13!679;CL:0000255!1.43e-13!679;CL:0000144!2.64e-11!625;CL:0000003!3.70e-11!722;CL:0002139!1.75e-09!24;CL:0002371!1.34e-08!591;CL:0000071!5.27e-08!18;CL:0002546!5.27e-08!18;CL:0000063!8.17e-08!578;CL:0000222!1.44e-07!119;CL:0000115!5.65e-07!35;CL:0000076!8.17e-07!62 | |ontology_enrichment_celltype=CL:0000012!1.80e-14!682;CL:0000548!1.43e-13!679;CL:0000004!1.43e-13!679;CL:0000255!1.43e-13!679;CL:0000144!2.64e-11!625;CL:0000003!3.70e-11!722;CL:0002139!1.75e-09!24;CL:0002371!1.34e-08!591;CL:0000071!5.27e-08!18;CL:0002546!5.27e-08!18;CL:0000063!8.17e-08!578;CL:0000222!1.44e-07!119;CL:0000115!5.65e-07!35;CL:0000076!8.17e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000071;2.20e-18;18!CL:0002139;3.49e-15;24!CL:0000945;1.84e-13;24!CL:1000413;1.09e-11;9!CL:0000115;1.29e-10;36!CL:0002543;3.10e-09;6!CL:0000542;2.10e-07;53 | |ontology_enrichment_celltype_v019=CL:0000071;2.20e-18;18!CL:0002139;3.49e-15;24!CL:0000945;1.84e-13;24!CL:1000413;1.09e-11;9!CL:0000115;1.29e-10;36!CL:0002543;3.10e-09;6!CL:0000542;2.10e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.81e-19,18;CL:0002546,3.81e-19,18;CL:0002139,8.53e-16,24;CL:0000945,8.12e-14,24;CL:0000826,8.12e-14,24;CL:0000115,1.45e-12,36;CL:1000413,2.40e-12,9;CL:0000838,2.34e-11,52;CL:0000542,4.74e-11,53;CL:0000051,4.74e-11,53;CL:0002087,8.49e-10,115;CL:0000738,1.82e-09,136;CL:0002543,2.65e-09,6;CL:0002078,3.03e-09,45;CL:0002031,4.38e-09,120;CL:0000988,8.48e-08,177;CL:0000213,2.97e-07,58;CL:0000215,2.97e-07,58;CL:0000817,3.37e-07,3;CL:0002032,9.33e-07,161;CL:0000837,9.33e-07,161;CL:0000037,9.42e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002546;2.20e-18;18!CL:0000051;2.10e-07;53 | |ontology_enrichment_development_v019=CL:0002546;2.20e-18;18!CL:0000051;2.10e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;7.59e-18;10 | |ontology_enrichment_disease_v019=DOID:0060058;7.59e-18;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.13e-18,10 | |||
|ontology_enrichment_uberon=UBERON:0000055!8.81e-13!69;UBERON:0001981!4.92e-11!60;UBERON:0007500!4.92e-11!60;UBERON:0004537!4.92e-11!60;UBERON:0006965!4.92e-11!60;UBERON:0002049!5.93e-11!79;UBERON:0007798!5.93e-11!79;UBERON:0001637!1.70e-09!42;UBERON:0003509!1.70e-09!42;UBERON:0004572!1.70e-09!42;UBERON:0004872!3.29e-09!84;UBERON:0004535!2.82e-08!110;UBERON:0001986!5.27e-08!18;UBERON:0004638!5.27e-08!18;UBERON:0004852!5.27e-08!18;UBERON:0004573!6.08e-08!33;UBERON:0004571!6.08e-08!33;UBERON:0001009!2.16e-07!113 | |ontology_enrichment_uberon=UBERON:0000055!8.81e-13!69;UBERON:0001981!4.92e-11!60;UBERON:0007500!4.92e-11!60;UBERON:0004537!4.92e-11!60;UBERON:0006965!4.92e-11!60;UBERON:0002049!5.93e-11!79;UBERON:0007798!5.93e-11!79;UBERON:0001637!1.70e-09!42;UBERON:0003509!1.70e-09!42;UBERON:0004572!1.70e-09!42;UBERON:0004872!3.29e-09!84;UBERON:0004535!2.82e-08!110;UBERON:0001986!5.27e-08!18;UBERON:0004638!5.27e-08!18;UBERON:0004852!5.27e-08!18;UBERON:0004573!6.08e-08!33;UBERON:0004571!6.08e-08!33;UBERON:0001009!2.16e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.20e-18;18!UBERON:0001986;2.20e-18;18!UBERON:0004852;2.20e-18;18!UBERON:0000487;1.91e-14;22!UBERON:0006914;2.50e-12;25!UBERON:0003915;1.09e-11;9!UBERON:0004700;1.09e-11;9!UBERON:0001917;1.09e-11;9!UBERON:0000490;3.73e-11;33!UBERON:0007500;8.16e-10;56!UBERON:0001981;8.16e-10;56!UBERON:0004537;8.16e-10;56!UBERON:0001637;9.63e-09;42!UBERON:0003509;9.63e-09;42!UBERON:0004572;9.63e-09;42!UBERON:0000055;2.59e-08;65!UBERON:0000947;2.57e-07;21!UBERON:0010191;2.57e-07;21!UBERON:0004573;9.65e-07;33!UBERON:0004571;9.65e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004638;2.20e-18;18!UBERON:0001986;2.20e-18;18!UBERON:0004852;2.20e-18;18!UBERON:0000487;1.91e-14;22!UBERON:0006914;2.50e-12;25!UBERON:0003915;1.09e-11;9!UBERON:0004700;1.09e-11;9!UBERON:0001917;1.09e-11;9!UBERON:0000490;3.73e-11;33!UBERON:0007500;8.16e-10;56!UBERON:0001981;8.16e-10;56!UBERON:0004537;8.16e-10;56!UBERON:0001637;9.63e-09;42!UBERON:0003509;9.63e-09;42!UBERON:0004572;9.63e-09;42!UBERON:0000055;2.59e-08;65!UBERON:0000947;2.57e-07;21!UBERON:0010191;2.57e-07;21!UBERON:0004573;9.65e-07;33!UBERON:0004571;9.65e-07;33 | ||
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| ||
|short_description=p10@SERP1 | |short_description=p10@SERP1 | ||
}} | }} |
Revision as of 05:27, 21 November 2012
Short description: | p10@SERP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SERP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 214bp_to_uc003exy.2_5end |
EntrezGene: | SERP1 |
HGNC: | 10759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.81e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.81e-19 | 18 |
endothelial cell of vascular tree | 8.53e-16 | 24 |
lymphocyte of B lineage | 8.12e-14 | 24 |
pro-B cell | 8.12e-14 | 24 |
endothelial cell | 1.45e-12 | 36 |
endothelial cell of artery | 2.40e-12 | 9 |
lymphoid lineage restricted progenitor cell | 2.34e-11 | 52 |
lymphocyte | 4.74e-11 | 53 |
common lymphoid progenitor | 4.74e-11 | 53 |
nongranular leukocyte | 8.49e-10 | 115 |
leukocyte | 1.82e-09 | 136 |
vein endothelial cell | 2.65e-09 | 6 |
meso-epithelial cell | 3.03e-09 | 45 |
hematopoietic lineage restricted progenitor cell | 4.38e-09 | 120 |
hematopoietic cell | 8.48e-08 | 177 |
lining cell | 2.97e-07 | 58 |
barrier cell | 2.97e-07 | 58 |
precursor B cell | 3.37e-07 | 3 |
hematopoietic oligopotent progenitor cell | 9.33e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.33e-07 | 161 |
hematopoietic stem cell | 9.42e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.81e-19 | 18 |
endothelium | 3.81e-19 | 18 |
cardiovascular system endothelium | 3.81e-19 | 18 |
simple squamous epithelium | 4.71e-15 | 22 |
epithelial tube open at both ends | 6.64e-15 | 59 |
blood vessel | 6.64e-15 | 59 |
blood vasculature | 6.64e-15 | 59 |
vascular cord | 6.64e-15 | 59 |
vessel | 2.19e-13 | 68 |
squamous epithelium | 7.49e-13 | 25 |
endothelial tube | 2.40e-12 | 9 |
arterial system endothelium | 2.40e-12 | 9 |
endothelium of artery | 2.40e-12 | 9 |
splanchnic layer of lateral plate mesoderm | 4.40e-12 | 83 |
vasculature | 5.43e-12 | 78 |
vascular system | 5.43e-12 | 78 |
artery | 1.37e-10 | 42 |
arterial blood vessel | 1.37e-10 | 42 |
arterial system | 1.37e-10 | 42 |
cardiovascular system | 2.28e-08 | 109 |
lateral plate mesoderm | 3.28e-08 | 203 |
circulatory system | 5.72e-08 | 112 |
systemic artery | 1.04e-07 | 33 |
systemic arterial system | 1.04e-07 | 33 |
aorta | 1.40e-07 | 21 |
aortic system | 1.40e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.13e-18 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.