FFCP PHASE1:Hg19::chr5:172662197..172662216,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.32e-07!254;CL:0002548!1.72e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.32e-07!254;CL:0002548!1.72e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.23e-08;19!CL:0002548;4.54e-08;6 | |ontology_enrichment_celltype_v019=CL:0000077;1.23e-08;19!CL:0002548;4.54e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.35e-08,19;CL:0002548,5.18e-08,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.75e-16!143;DOID:305!2.73e-13!106;DOID:162!2.55e-12!235;DOID:14566!4.38e-12!239 | |ontology_enrichment_disease=DOID:0050687!2.75e-16!143;DOID:305!2.73e-13!106;DOID:162!2.55e-12!235;DOID:14566!4.38e-12!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.52e-14,143;DOID:162,5.92e-12,235;DOID:14566,2.10e-11,239;DOID:305,2.16e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0007100!6.15e-12!27;UBERON:0000948!6.80e-09!24;UBERON:0005498!6.80e-09!24;UBERON:0004140!6.80e-09!24;UBERON:0009881!6.80e-09!24;UBERON:0004141!6.80e-09!24;UBERON:0003084!6.80e-09!24;UBERON:0007005!6.80e-09!24;UBERON:0004139!6.80e-09!24;UBERON:0004291!6.80e-09!24;UBERON:0001048!7.66e-08!168;UBERON:0003103!3.67e-07!69 | |ontology_enrichment_uberon=UBERON:0007100!6.15e-12!27;UBERON:0000948!6.80e-09!24;UBERON:0005498!6.80e-09!24;UBERON:0004140!6.80e-09!24;UBERON:0009881!6.80e-09!24;UBERON:0004141!6.80e-09!24;UBERON:0003084!6.80e-09!24;UBERON:0007005!6.80e-09!24;UBERON:0004139!6.80e-09!24;UBERON:0004291!6.80e-09!24;UBERON:0001048!7.66e-08!168;UBERON:0003103!3.67e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.64e-14;25!UBERON:0000948;2.00e-09;22!UBERON:0004151;1.10e-07;3!UBERON:0003978;1.38e-07;3!UBERON:0000946;1.38e-07;3!UBERON:0001723;2.97e-07;3!UBERON:0001033;2.97e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007100;8.64e-14;25!UBERON:0000948;2.00e-09;22!UBERON:0004151;1.10e-07;3!UBERON:0003978;1.38e-07;3!UBERON:0000946;1.38e-07;3!UBERON:0001723;2.97e-07;3!UBERON:0001033;2.97e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.65e-14,27;UBERON:0003103,5.62e-11,68;UBERON:0000948,7.40e-10,24;UBERON:0005498,7.40e-10,24;UBERON:0004140,7.40e-10,24;UBERON:0009881,7.40e-10,24;UBERON:0004141,7.40e-10,24;UBERON:0003084,7.40e-10,24;UBERON:0007005,7.40e-10,24;UBERON:0004139,7.40e-10,24;UBERON:0004291,7.40e-10,24;UBERON:0004151,1.10e-07,3;UBERON:0003978,1.39e-07,3;UBERON:0009751,1.39e-07,3;UBERON:0000946,1.39e-07,3;UBERON:0002523,1.39e-07,3;UBERON:0005983,1.39e-07,3;UBERON:0002165,1.39e-07,3;UBERON:0002062,1.39e-07,3;UBERON:0007280,1.39e-07,3;UBERON:0001723,3.00e-07,3;UBERON:0001033,3.00e-07,3;UBERON:0010056,3.00e-07,3 | |||
|phase1_expression=0,0,0.845726424575827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0,4.12677062910101,1.46296476575767,0,0,0,0,2.28081631715554,0.732186172644509,0,0,0,0,0,0,0,0.916008719652036,0,0,0,0,0.25326102332916,0,0,0,40.3687872102461,1.06748995729705,140.353835049364,4.97937656639626,2.02066008104532,0.817309515567294,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47461838108027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,1.16193942869518,1.0366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.674156540800822,0.784885860501384,0,0,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,1.71228737011138,0,0,0,0,0,0,0,0,0.895585227028483,2.61570544662566,5.75074018747817,0,0,0,0,0,0,0,0,6.84289784090821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,6.63166629531089,6.97226766880235,10.2972180917519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,12.4167685551006,0,1.47495334833363,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88843391371837,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,1.43176155503017,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,2.16207551742449,0,1.18193840883968,0,0,7.11862479226498,0,0,0,0,0,0,0,0,0,0,0,1.25660702173681,0,0,0,0,0,0,0,0,0,0,0,0,3.58696709697646,0,0,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,3.83155057352899,4.89161547330224,10.439556319966,0,3.62972148145992,0,0.063186579628488,20.8949552986145,13.7905294558339,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.859930162358083,0,0,0,0.0969890164884194,2.20640316728751,0,4.11125773940253,0,0,4.30213042016567,0,0,7.39295555453882,2.01726584015748,10.880976635762,0,0,0.248505071130865,3.53541051925193,4.62074300650288,4.39331954511799,0,0,0,0,0,0,0.262887354279314,76.5233779485977,87.3101215484515,30.868540056803,297.122352742499,550.267793711084,217.368999548384,248.914765563321,0,5.82479747637269,4.17550866228285,3.29663433524666,2.62873821031321,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,6.23041985464498,0,0,243.711106293318,231.070097657536,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,5.47477881229854,0.704815022316672,0,0.314408610199332,0,0,15.6113189199376,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,5.00442087887438,5.13837600380941,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59505028734797,0,1.95334891696384,0.380805212168795,0.406870733204662,0,1.18151612746737,0,0.398095888698616,0.400027764663154,0,0,2.52369796457302,0,0,33.4072693715471,8.38811924395408,8.33480907565802,0,0,0.926404341482917,0,1.23682402162117,0,0,4.35610581599509,24.8709846046463,6.38105907972503,0,0,0,0,8.84546591885314,0,0,0,0,0,0,0,0,0,0,10.8903059510649,0,0,0,0,14.7483559468213,3.35186950783946,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,15.454033758554,0,15.018336599544,0,0,20.8862033222088,0,2.42046082444224,0,0,0.327543835020193,0,0,0,0,0.126831620387814,0,0,0,0,3.70511040154826,0,0,0.606965604236632,0,0,10.8319948302433,0,0,0,0.472775363535873,0,0,0,0,0,0,4.7775168788705,0,0,5.57958841767001,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,11.6570638334193,7.01818390386317,29.2457639487211,5.94600453887843,4.40489719951944,0,0,0,0.655678681511872,0,0,0,0,0,1.6906229103336,0,24.3418347567821,37.4500329126483,0,0,11.9984256383335,0,0,0,0,0,0.0679914901909147,0,3.1741610430924,0,0.462175628631418,0,0,0,27.7469717215047,9.4849611660043,1.60330443159336,0.459474497674225,0.50141507858475,0.0757786982182394,0,0,0,3.19850972851471,1.42838658878244,0,0.31037357147929,0.112131862580613,0.190941474834495,0.202117188958219,8.49095316798149,76.6602594431029,0.673520530145875,0,8.64916927019635,2.44209805832924,1.3874554964103,0,0.808426818959282,117.320471201727,0,0,0,1.40891655513718,0.320568492303233 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| ||
|short_description=p1@NKX2-5 | |short_description=p1@NKX2-5 | ||
}} | }} |
Revision as of 23:34, 20 November 2012
Short description: | p1@NKX2-5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NKX2-5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000521848_5end |
EntrezGene: | NKX2-5 |
HGNC: | 2488 |
UniProt: | B4DNB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.35e-08 | 19 |
cardiac fibroblast | 5.18e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.65e-14 | 27 |
compound organ | 5.62e-11 | 68 |
heart | 7.40e-10 | 24 |
primitive heart tube | 7.40e-10 | 24 |
primary heart field | 7.40e-10 | 24 |
anterior lateral plate mesoderm | 7.40e-10 | 24 |
heart tube | 7.40e-10 | 24 |
heart primordium | 7.40e-10 | 24 |
cardiac mesoderm | 7.40e-10 | 24 |
cardiogenic plate | 7.40e-10 | 24 |
heart rudiment | 7.40e-10 | 24 |
cardiac chamber | 1.10e-07 | 3 |
valve | 1.39e-07 | 3 |
cardiac mesenchyme | 1.39e-07 | 3 |
cardial valve | 1.39e-07 | 3 |
tunica intima | 1.39e-07 | 3 |
heart layer | 1.39e-07 | 3 |
endocardium | 1.39e-07 | 3 |
endocardial cushion | 1.39e-07 | 3 |
presumptive endocardium | 1.39e-07 | 3 |
tongue | 3.00e-07 | 3 |
gustatory system | 3.00e-07 | 3 |
future tongue | 3.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.52e-14 | 143 |
cancer | 5.92e-12 | 235 |
disease of cellular proliferation | 2.10e-11 | 239 |
carcinoma | 2.16e-09 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.