FFCP PHASE1:Hg19::chr17:4806374..4806394,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000625!7.97e-16!11;CL:0000791!1.27e-14!18;CL:0000789!1.27e-14!18;CL:0002420!1.27e-14!18;CL:0002419!1.27e-14!18;CL:0000790!1.27e-14!18;CL:0000738!2.43e-14!140;CL:0000037!3.26e-12!172;CL:0000566!3.26e-12!172;CL:0000988!1.71e-11!182;CL:0000084!4.33e-11!25;CL:0000827!4.33e-11!25;CL:0002032!7.57e-11!165;CL:0000837!7.57e-11!165;CL:0002087!1.04e-10!119;CL:0000838!6.46e-10!52;CL:0000542!1.28e-09!53;CL:0000051!1.28e-09!53;CL:0002031!1.50e-09!124;CL:0000623!3.58e-07!3;CL:0000825!3.58e-07!3;CL:0000842!9.26e-07!3 | |ontology_enrichment_celltype=CL:0000625!7.97e-16!11;CL:0000791!1.27e-14!18;CL:0000789!1.27e-14!18;CL:0002420!1.27e-14!18;CL:0002419!1.27e-14!18;CL:0000790!1.27e-14!18;CL:0000738!2.43e-14!140;CL:0000037!3.26e-12!172;CL:0000566!3.26e-12!172;CL:0000988!1.71e-11!182;CL:0000084!4.33e-11!25;CL:0000827!4.33e-11!25;CL:0002032!7.57e-11!165;CL:0000837!7.57e-11!165;CL:0002087!1.04e-10!119;CL:0000838!6.46e-10!52;CL:0000542!1.28e-09!53;CL:0000051!1.28e-09!53;CL:0002031!1.50e-09!124;CL:0000623!3.58e-07!3;CL:0000825!3.58e-07!3;CL:0000842!9.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.95e-15;3!CL:0000226;2.53e-14;3!CL:0000842;2.53e-14;3!CL:0000625;2.91e-14;11!CL:0000791;1.78e-08;18!CL:0000789;1.78e-08;18!CL:0002419;1.78e-08;18 | |ontology_enrichment_celltype_v019=CL:0000623;2.95e-15;3!CL:0000226;2.53e-14;3!CL:0000842;2.53e-14;3!CL:0000625;2.91e-14;11!CL:0000791;1.78e-08;18!CL:0000789;1.78e-08;18!CL:0002419;1.78e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.96e-15,3;CL:0000825,2.96e-15,3;CL:0000226,2.98e-14,3;CL:0000842,2.98e-14,3;CL:0000625,3.29e-14,11;CL:0000791,1.91e-08,18;CL:0000789,1.91e-08,18;CL:0002420,1.91e-08,18;CL:0002419,1.91e-08,18;CL:0000790,1.91e-08,18;CL:0000767,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.78e-08;18 | |ontology_enrichment_development_v019=CL:0000790;1.78e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-15!115;UBERON:0000178!2.38e-13!15;UBERON:0000179!2.38e-13!15;UBERON:0000463!2.38e-13!15;UBERON:0003296!2.25e-08!4;UBERON:0010133!2.25e-08!4;UBERON:0002390!1.30e-07!102;UBERON:0003061!1.30e-07!102;UBERON:0002193!7.82e-07!112;UBERON:0004151!9.09e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.09e-15!115;UBERON:0000178!2.38e-13!15;UBERON:0000179!2.38e-13!15;UBERON:0000463!2.38e-13!15;UBERON:0003296!2.25e-08!4;UBERON:0010133!2.25e-08!4;UBERON:0002390!1.30e-07!102;UBERON:0003061!1.30e-07!102;UBERON:0002193!7.82e-07!112;UBERON:0004151!9.09e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.19e-22;15!UBERON:0000179;2.19e-22;15!UBERON:0000463;2.19e-22;15!UBERON:0003296;2.67e-11;4!UBERON:0010133;2.67e-11;4!UBERON:0002081;9.53e-11;2!UBERON:0002133;9.99e-11;2!UBERON:0000007;1.68e-10;2!UBERON:0000341;7.61e-10;2!UBERON:0002390;1.56e-09;32!UBERON:0004151;1.99e-07;3!UBERON:0003978;2.06e-07;3!UBERON:0000946;2.06e-07;3!UBERON:0001723;4.78e-07;3!UBERON:0001033;4.78e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.19e-22;15!UBERON:0000179;2.19e-22;15!UBERON:0000463;2.19e-22;15!UBERON:0003296;2.67e-11;4!UBERON:0010133;2.67e-11;4!UBERON:0002081;9.53e-11;2!UBERON:0002133;9.99e-11;2!UBERON:0000007;1.68e-10;2!UBERON:0000341;7.61e-10;2!UBERON:0002390;1.56e-09;32!UBERON:0004151;1.99e-07;3!UBERON:0003978;2.06e-07;3!UBERON:0000946;2.06e-07;3!UBERON:0001723;4.78e-07;3!UBERON:0001033;4.78e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.85e-22,15;UBERON:0000179,1.85e-22,15;UBERON:0000463,1.85e-22,15;UBERON:0003296,2.59e-11,4;UBERON:0010133,2.59e-11,4;UBERON:0002081,9.55e-11,2;UBERON:0010227,9.55e-11,2;UBERON:0002133,1.00e-10,2;UBERON:0000007,1.68e-10,2;UBERON:0000341,5.81e-10,2;UBERON:0004151,2.00e-07,3;UBERON:0003978,2.06e-07,3;UBERON:0009751,2.06e-07,3;UBERON:0000946,2.06e-07,3;UBERON:0002523,2.06e-07,3;UBERON:0005983,2.06e-07,3;UBERON:0002165,2.06e-07,3;UBERON:0002062,2.06e-07,3;UBERON:0007280,2.06e-07,3;UBERON:0001723,5.16e-07,3;UBERON:0001033,5.16e-07,3;UBERON:0010056,5.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,0.928896739896456,0,0,0,0.697204805222715,0.142169232487422,0,0,1.40381113229099,1.95309783644267,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.800791974072025,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.637130828648193,0.651083453856419,0.950452044448374,1.20460095262218,1.15187950038977,0,0.947109008176067,1.64225599384209,3.62892137804518,5.61624411145365,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4426302907021,6.90008239550455,7.57223914050515,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.37285620900479,6.40365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,2.84823593587081,1.19115887728894,0.411362273086194,1.94541993357815,1.62009431171434,0,0,0,0,0,0,0,0,0,0,3.38677732358213,0,0,1.14117339516596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,54.1807858468173,0,4.30723814746088,0,0,0.669514372325618,2.62015542698232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,90.7663064494176,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,2.48105589194647,0,0,4.82131652290458,0.336283722218824,2.42786241694653,20.2619350302655,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,2.21219056425817,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.923965261706223,2.3196288626764,1.45713297917742,0,0,0,0,1.31928620094515,0.301925687133347,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,3.29416102629736,0,0,0,0,0.0757786982182394,0,0,0,1.49263787330687,2.85677317756488,0,0,0,0,0.202117188958219,1.30630048738177,10.951465634729,0.0673520530145875,0.143444410785353,2.99394320891412,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,0.928896739896456,0,0,0,0.697204805222715,0.142169232487422,0,0,1.40381113229099,1.95309783644267,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.800791974072025,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.637130828648193,0.651083453856419,0.950452044448374,1.20460095262218,1.15187950038977,0,0.947109008176067,1.64225599384209,3.62892137804518,5.61624411145365,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4426302907021,6.90008239550455,7.57223914050515,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.37285620900479,6.40365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,2.84823593587081,1.19115887728894,0.411362273086194,1.94541993357815,1.62009431171434,0,0,0,0,0,0,0,0,0,0,3.38677732358213,0,0,1.14117339516596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,54.1807858468173,0,4.30723814746088,0,0,0.669514372325618,2.62015542698232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,90.7663064494176,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,2.48105589194647,0,0,4.82131652290458,0.336283722218824,2.42786241694653,20.2619350302655,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,2.21219056425817,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.923965261706223,2.3196288626764,1.45713297917742,0,0,0,0,1.31928620094515,0.301925687133347,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,3.29416102629736,0,0,0,0,0.0757786982182394,0,0,0,1.49263787330687,2.85677317756488,0,0,0,0,0.202117188958219,1.30630048738177,10.951465634729,0.0673520530145875,0.143444410785353,2.99394320891412,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p1@CHRNE | |short_description=p1@CHRNE | ||
}} | }} |
Revision as of 16:57, 20 November 2012
Short description: | p1@CHRNE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CHRNE_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | -5bp_to_ENST00000293780, NM_000080, uc002fzk.1_5end |
EntrezGene: | CHRNE |
HGNC: | 1966 |
UniProt: | Q04844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.96e-15 | 3 |
pro-NK cell | 2.96e-15 | 3 |
single nucleate cell | 2.98e-14 | 3 |
mononuclear cell | 2.98e-14 | 3 |
CD8-positive, alpha-beta T cell | 3.29e-14 | 11 |
mature alpha-beta T cell | 1.91e-08 | 18 |
alpha-beta T cell | 1.91e-08 | 18 |
immature T cell | 1.91e-08 | 18 |
mature T cell | 1.91e-08 | 18 |
immature alpha-beta T cell | 1.91e-08 | 18 |
basophil | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.85e-22 | 15 |
haemolymphatic fluid | 1.85e-22 | 15 |
organism substance | 1.85e-22 | 15 |
gland of diencephalon | 2.59e-11 | 4 |
neuroendocrine gland | 2.59e-11 | 4 |
cardiac atrium | 9.55e-11 | 2 |
future cardiac atrium | 9.55e-11 | 2 |
atrioventricular valve | 1.00e-10 | 2 |
pituitary gland | 1.68e-10 | 2 |
throat | 5.81e-10 | 2 |
cardiac chamber | 2.00e-07 | 3 |
valve | 2.06e-07 | 3 |
cardiac mesenchyme | 2.06e-07 | 3 |
cardial valve | 2.06e-07 | 3 |
tunica intima | 2.06e-07 | 3 |
heart layer | 2.06e-07 | 3 |
endocardium | 2.06e-07 | 3 |
endocardial cushion | 2.06e-07 | 3 |
presumptive endocardium | 2.06e-07 | 3 |
tongue | 5.16e-07 | 3 |
gustatory system | 5.16e-07 | 3 |
future tongue | 5.16e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.