FFCP PHASE1:Hg19::chr12:66218212..66218244,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!1.98e-27!248;CL:0000055!2.81e-27!180;CL:0000220!9.51e-27!246;CL:0000012!3.58e-22!682;CL:0000548!9.25e-22!679;CL:0000004!9.25e-22!679;CL:0000255!9.25e-22!679;CL:0002371!8.03e-20!591;CL:0000144!3.60e-18!625;CL:0000066!2.36e-16!254;CL:0000183!2.53e-14!59;CL:0000680!1.25e-13!57;CL:0000056!1.25e-13!57;CL:0000355!1.25e-13!57;CL:0000393!1.80e-13!60;CL:0000211!1.80e-13!60;CL:0000187!1.21e-12!54;CL:0000222!1.63e-12!119;CL:0000003!3.15e-12!722;CL:0000057!3.03e-10!75;CL:0000192!3.35e-09!42;CL:0000514!3.35e-09!42;CL:0000223!2.75e-08!59;CL:0002076!5.56e-08!43;CL:0000359!1.08e-07!32;CL:1000449!9.32e-07!16 | |ontology_enrichment_celltype=CL:0002321!1.98e-27!248;CL:0000055!2.81e-27!180;CL:0000220!9.51e-27!246;CL:0000012!3.58e-22!682;CL:0000548!9.25e-22!679;CL:0000004!9.25e-22!679;CL:0000255!9.25e-22!679;CL:0002371!8.03e-20!591;CL:0000144!3.60e-18!625;CL:0000066!2.36e-16!254;CL:0000183!2.53e-14!59;CL:0000680!1.25e-13!57;CL:0000056!1.25e-13!57;CL:0000355!1.25e-13!57;CL:0000393!1.80e-13!60;CL:0000211!1.80e-13!60;CL:0000187!1.21e-12!54;CL:0000222!1.63e-12!119;CL:0000003!3.15e-12!722;CL:0000057!3.03e-10!75;CL:0000192!3.35e-09!42;CL:0000514!3.35e-09!42;CL:0000223!2.75e-08!59;CL:0002076!5.56e-08!43;CL:0000359!1.08e-07!32;CL:1000449!9.32e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000187;5.81e-08;55!CL:0000359;7.67e-08;32!CL:0000192;1.78e-07;43!CL:0000393;1.79e-07;61!CL:0000211;1.79e-07;61!CL:1000449;3.03e-07;15 | |ontology_enrichment_celltype_v019=CL:0000187;5.81e-08;55!CL:0000359;7.67e-08;32!CL:0000192;1.78e-07;43!CL:0000393;1.79e-07;61!CL:0000211;1.79e-07;61!CL:1000449;3.03e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.04e-26,250;CL:0000680,1.91e-14,58;CL:0000056,1.91e-14,58;CL:0000355,1.91e-14,58;CL:0000393,2.73e-14,61;CL:0000211,2.73e-14,61;CL:0000187,2.29e-13,55;CL:0000222,3.21e-13,121;CL:0000066,3.67e-13,253;CL:0000192,6.32e-10,43;CL:0000514,6.32e-10,43;CL:0000057,9.65e-09,76;CL:0000359,2.38e-08,32;CL:1000449,3.12e-07,15;CL:0000223,3.18e-07,58;CL:0002076,7.63e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000355;3.79e-08;58!CL:0000514;1.78e-07;43 | |ontology_enrichment_development_v019=CL:0000355;3.79e-08;58!CL:0000514;1.78e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.56e-19!143;UBERON:0000486!1.71e-16!82;UBERON:0000490!2.35e-16!138;UBERON:0000914!4.78e-16!83;UBERON:0002329!4.78e-16!83;UBERON:0003077!4.78e-16!83;UBERON:0003059!4.78e-16!83;UBERON:0007282!4.78e-16!83;UBERON:0009618!4.78e-16!83;UBERON:0007285!4.78e-16!83;UBERON:0000119!3.61e-15!312;UBERON:0003914!4.01e-15!118;UBERON:0002100!3.20e-14!216;UBERON:0000483!3.41e-14!309;UBERON:0004290!3.43e-13!70;UBERON:0002049!3.62e-13!79;UBERON:0007798!3.62e-13!79;UBERON:0000475!4.61e-12!365;UBERON:0003104!7.01e-12!238;UBERON:0009142!7.01e-12!238;UBERON:0001134!2.93e-11!61;UBERON:0002036!2.93e-11!61;UBERON:0003082!2.93e-11!61;UBERON:0000481!1.19e-10!347;UBERON:0002385!1.55e-10!63;UBERON:0001015!1.55e-10!63;UBERON:0000383!1.55e-10!63;UBERON:0001981!3.29e-10!60;UBERON:0007500!3.29e-10!60;UBERON:0004537!3.29e-10!60;UBERON:0006965!3.29e-10!60;UBERON:0001637!1.59e-09!42;UBERON:0003509!1.59e-09!42;UBERON:0004572!1.59e-09!42;UBERON:0000055!2.68e-09!69;UBERON:0000468!3.72e-09!659;UBERON:0003102!5.75e-09!95;UBERON:0001444!6.05e-09!48;UBERON:0004872!1.14e-08!84;UBERON:0000922!2.98e-08!612;UBERON:0000019!5.17e-08!19;UBERON:0000047!5.17e-08!19;UBERON:0004088!5.17e-08!19;UBERON:0003072!5.17e-08!19;UBERON:0003071!5.17e-08!19;UBERON:0004128!5.17e-08!19;UBERON:0004535!1.20e-07!110;UBERON:0005085!1.50e-07!29;UBERON:0002050!3.41e-07!605;UBERON:0005423!3.41e-07!605;UBERON:0000970!3.58e-07!20;UBERON:0001456!3.66e-07!21;UBERON:0000923!3.90e-07!604;UBERON:0005291!3.90e-07!604;UBERON:0006598!3.90e-07!604;UBERON:0002532!3.90e-07!604;UBERON:0001801!4.05e-07!14;UBERON:0000467!4.44e-07!625;UBERON:0001009!5.13e-07!113;UBERON:0000480!6.34e-07!626;UBERON:0004573!6.39e-07!33;UBERON:0004571!6.39e-07!33;UBERON:0004211!9.32e-07!16;UBERON:0001285!9.32e-07!16;UBERON:0007684!9.32e-07!16;UBERON:0003220!9.32e-07!16;UBERON:0004208!9.32e-07!16 | |ontology_enrichment_uberon=UBERON:0005256!6.56e-19!143;UBERON:0000486!1.71e-16!82;UBERON:0000490!2.35e-16!138;UBERON:0000914!4.78e-16!83;UBERON:0002329!4.78e-16!83;UBERON:0003077!4.78e-16!83;UBERON:0003059!4.78e-16!83;UBERON:0007282!4.78e-16!83;UBERON:0009618!4.78e-16!83;UBERON:0007285!4.78e-16!83;UBERON:0000119!3.61e-15!312;UBERON:0003914!4.01e-15!118;UBERON:0002100!3.20e-14!216;UBERON:0000483!3.41e-14!309;UBERON:0004290!3.43e-13!70;UBERON:0002049!3.62e-13!79;UBERON:0007798!3.62e-13!79;UBERON:0000475!4.61e-12!365;UBERON:0003104!7.01e-12!238;UBERON:0009142!7.01e-12!238;UBERON:0001134!2.93e-11!61;UBERON:0002036!2.93e-11!61;UBERON:0003082!2.93e-11!61;UBERON:0000481!1.19e-10!347;UBERON:0002385!1.55e-10!63;UBERON:0001015!1.55e-10!63;UBERON:0000383!1.55e-10!63;UBERON:0001981!3.29e-10!60;UBERON:0007500!3.29e-10!60;UBERON:0004537!3.29e-10!60;UBERON:0006965!3.29e-10!60;UBERON:0001637!1.59e-09!42;UBERON:0003509!1.59e-09!42;UBERON:0004572!1.59e-09!42;UBERON:0000055!2.68e-09!69;UBERON:0000468!3.72e-09!659;UBERON:0003102!5.75e-09!95;UBERON:0001444!6.05e-09!48;UBERON:0004872!1.14e-08!84;UBERON:0000922!2.98e-08!612;UBERON:0000019!5.17e-08!19;UBERON:0000047!5.17e-08!19;UBERON:0004088!5.17e-08!19;UBERON:0003072!5.17e-08!19;UBERON:0003071!5.17e-08!19;UBERON:0004128!5.17e-08!19;UBERON:0004535!1.20e-07!110;UBERON:0005085!1.50e-07!29;UBERON:0002050!3.41e-07!605;UBERON:0005423!3.41e-07!605;UBERON:0000970!3.58e-07!20;UBERON:0001456!3.66e-07!21;UBERON:0000923!3.90e-07!604;UBERON:0005291!3.90e-07!604;UBERON:0006598!3.90e-07!604;UBERON:0002532!3.90e-07!604;UBERON:0001801!4.05e-07!14;UBERON:0000467!4.44e-07!625;UBERON:0001009!5.13e-07!113;UBERON:0000480!6.34e-07!626;UBERON:0004573!6.39e-07!33;UBERON:0004571!6.39e-07!33;UBERON:0004211!9.32e-07!16;UBERON:0001285!9.32e-07!16;UBERON:0007684!9.32e-07!16;UBERON:0003220!9.32e-07!16;UBERON:0004208!9.32e-07!16 | ||
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| ||
|short_description=p5@HMGA2 | |short_description=p5@HMGA2 | ||
}} | }} |
Revision as of 15:09, 20 November 2012
Short description: | p5@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HMGA2_5end |
Coexpression cluster: | C749_Wilms_rhabdomyosarcoma_medulloblastoma_fibrous_retinoblastoma_endometrial_schwannoma |
Association with transcript: | 0bp_to_ENST00000354636, ENST00000393578, ENST00000425208, ENST00000536545, ENST00000537275, ENST00000537429, NM_003483, NM_003484, uc001sss.1, uc001sst.1, uc001ssu.1, uc001ssv.2, uc001ssw.1, uc001ssx.2, uc010ssv.1_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | Q1M182Q1M188Q1M186F5H6H0Q1M187Q1M185P52926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.04e-26 | 250 |
muscle precursor cell | 1.91e-14 | 58 |
myoblast | 1.91e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-14 | 58 |
electrically responsive cell | 2.73e-14 | 61 |
electrically active cell | 2.73e-14 | 61 |
muscle cell | 2.29e-13 | 55 |
mesodermal cell | 3.21e-13 | 121 |
epithelial cell | 3.67e-13 | 253 |
smooth muscle cell | 6.32e-10 | 43 |
smooth muscle myoblast | 6.32e-10 | 43 |
fibroblast | 9.65e-09 | 76 |
vascular associated smooth muscle cell | 2.38e-08 | 32 |
epithelial cell of nephron | 3.12e-07 | 15 |
endodermal cell | 3.18e-07 | 58 |
endo-epithelial cell | 7.63e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.