FFCP PHASE1:Hg19::chr1:10856694..10856715,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.88e-20!254;CL:0002076!4.68e-11!43;CL:0000223!7.09e-09!59;CL:0000082!1.50e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.88e-20!254;CL:0002076!4.68e-11!43;CL:0000223!7.09e-09!59;CL:0000082!1.50e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.30e-08;14!CL:0002076;1.20e-07;42!CL:0000240;1.68e-07;6!CL:0000311;1.68e-07;6!CL:0000079;1.68e-07;6!CL:0000237;1.68e-07;6!CL:0002251;2.30e-07;20 | |ontology_enrichment_celltype_v019=CL:0002159;2.30e-08;14!CL:0002076;1.20e-07;42!CL:0000240;1.68e-07;6!CL:0000311;1.68e-07;6!CL:0000079;1.68e-07;6!CL:0000237;1.68e-07;6!CL:0002251;2.30e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.62e-10,42;CL:0000066,3.90e-09,253;CL:0002159,3.17e-08,14;CL:0002251,1.77e-07,20;CL:0000240,2.69e-07,6;CL:0000311,2.69e-07,6;CL:0000079,2.69e-07,6;CL:0000237,2.69e-07,6;CL:0000036,2.69e-07,6;CL:0000357,2.69e-07,6;CL:0000114,2.69e-07,6;CL:0000223,7.80e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;1.68e-07;6!CL:0000114;1.68e-07;6 | |ontology_enrichment_development_v019=CL:0000357;1.68e-07;6!CL:0000114;1.68e-07;6 | ||
|ontology_enrichment_disease=DOID:0050687!9.06e-17!143;DOID:305!4.52e-15!106;DOID:0050615!5.45e-07!16 | |ontology_enrichment_disease=DOID:0050687!9.06e-17!143;DOID:305!4.52e-15!106;DOID:0050615!5.45e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:3119;4.98e-09;14 | |ontology_enrichment_disease_v019=DOID:3119;4.98e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,4.95e-09,14;DOID:0050687,5.73e-08,143;DOID:305,9.75e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-12!169;UBERON:0000925!1.38e-12!169;UBERON:0006595!1.38e-12!169;UBERON:0000464!2.16e-11!104;UBERON:0004921!5.25e-11!129;UBERON:0004185!5.25e-11!129;UBERON:0001007!9.82e-11!155;UBERON:0001555!9.82e-11!155;UBERON:0007026!9.82e-11!155;UBERON:0000466!7.05e-10!126;UBERON:0005181!9.61e-10!35;UBERON:0000468!1.19e-09!659;UBERON:0001004!3.51e-09!72;UBERON:0005157!3.89e-09!51;UBERON:0002048!4.10e-09!22;UBERON:0000117!4.10e-09!22;UBERON:0000171!4.10e-09!22;UBERON:0000170!4.10e-09!22;UBERON:0005597!4.10e-09!22;UBERON:0000118!4.10e-09!22;UBERON:0005178!4.19e-09!34;UBERON:0002224!4.19e-09!34;UBERON:0005177!7.97e-09!107;UBERON:0005153!8.44e-09!37;UBERON:0000077!9.32e-09!130;UBERON:0000481!7.20e-08!347;UBERON:0001041!9.95e-08!98;UBERON:0000475!1.34e-07!365;UBERON:0007023!1.46e-07!115;UBERON:0004802!1.50e-07!19;UBERON:0000115!1.50e-07!19;UBERON:0000922!1.94e-07!612;UBERON:0005911!2.29e-07!82;UBERON:0000467!4.46e-07!625;UBERON:0003104!4.52e-07!238;UBERON:0009142!4.52e-07!238;UBERON:0000480!5.94e-07!626 | |ontology_enrichment_uberon=UBERON:0004119!1.38e-12!169;UBERON:0000925!1.38e-12!169;UBERON:0006595!1.38e-12!169;UBERON:0000464!2.16e-11!104;UBERON:0004921!5.25e-11!129;UBERON:0004185!5.25e-11!129;UBERON:0001007!9.82e-11!155;UBERON:0001555!9.82e-11!155;UBERON:0007026!9.82e-11!155;UBERON:0000466!7.05e-10!126;UBERON:0005181!9.61e-10!35;UBERON:0000468!1.19e-09!659;UBERON:0001004!3.51e-09!72;UBERON:0005157!3.89e-09!51;UBERON:0002048!4.10e-09!22;UBERON:0000117!4.10e-09!22;UBERON:0000171!4.10e-09!22;UBERON:0000170!4.10e-09!22;UBERON:0005597!4.10e-09!22;UBERON:0000118!4.10e-09!22;UBERON:0005178!4.19e-09!34;UBERON:0002224!4.19e-09!34;UBERON:0005177!7.97e-09!107;UBERON:0005153!8.44e-09!37;UBERON:0000077!9.32e-09!130;UBERON:0000481!7.20e-08!347;UBERON:0001041!9.95e-08!98;UBERON:0000475!1.34e-07!365;UBERON:0007023!1.46e-07!115;UBERON:0004802!1.50e-07!19;UBERON:0000115!1.50e-07!19;UBERON:0000922!1.94e-07!612;UBERON:0005911!2.29e-07!82;UBERON:0000467!4.46e-07!625;UBERON:0003104!4.52e-07!238;UBERON:0009142!4.52e-07!238;UBERON:0000480!5.94e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.26e-11;33!UBERON:0001041;1.34e-11;14!UBERON:0005409;5.11e-08;22!UBERON:0005910;4.92e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.26e-11;33!UBERON:0001041;1.34e-11;14!UBERON:0005409;5.11e-08;22!UBERON:0005910;4.92e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.61e-12,160;UBERON:0000925,6.61e-12,160;UBERON:0006595,6.61e-12,160;UBERON:0004921,2.34e-10,118;UBERON:0001007,1.40e-09,145;UBERON:0001555,1.40e-09,145;UBERON:0007026,1.40e-09,145;UBERON:0007023,7.63e-09,114;UBERON:0001004,3.07e-08,74;UBERON:0003103,5.11e-08,68;UBERON:0005181,1.19e-07,35;UBERON:0005910,3.93e-07,6;UBERON:0000915,5.01e-07,52;UBERON:0001041,5.12e-07,87;UBERON:0005178,7.38e-07,34;UBERON:0002224,7.38e-07,34 | |||
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| ||
|short_description=p3@CASZ1 | |short_description=p3@CASZ1 | ||
}} | }} |
Revision as of 08:09, 20 November 2012
Short description: | p3@CASZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CASZ1_5end |
Coexpression cluster: | C3843_merkel_pineal_small_heart_maxillary_skeletal_salivary |
Association with transcript: | 0bp_to_ENST00000344008, ENST00000377022, NM_001079843, NM_017766, uc001aro.2, uc001arp.1_5end |
EntrezGene: | CASZ1 |
HGNC: | 26002 |
UniProt: | Q86V15B3KRV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.62e-10 | 42 |
epithelial cell | 3.90e-09 | 253 |
general ecto-epithelial cell | 3.17e-08 | 14 |
epithelial cell of alimentary canal | 1.77e-07 | 20 |
stratified squamous epithelial cell | 2.69e-07 | 6 |
keratin accumulating cell | 2.69e-07 | 6 |
stratified epithelial cell | 2.69e-07 | 6 |
keratinizing barrier epithelial cell | 2.69e-07 | 6 |
epithelial fate stem cell | 2.69e-07 | 6 |
stratified epithelial stem cell | 2.69e-07 | 6 |
surface ectodermal cell | 2.69e-07 | 6 |
endodermal cell | 7.80e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.61e-12 | 160 |
endoderm | 6.61e-12 | 160 |
presumptive endoderm | 6.61e-12 | 160 |
subdivision of digestive tract | 2.34e-10 | 118 |
digestive system | 1.40e-09 | 145 |
digestive tract | 1.40e-09 | 145 |
primitive gut | 1.40e-09 | 145 |
adult organism | 7.63e-09 | 114 |
respiratory system | 3.07e-08 | 74 |
compound organ | 5.11e-08 | 68 |
thoracic segment organ | 1.19e-07 | 35 |
transitional epithelium | 3.93e-07 | 6 |
thoracic segment of trunk | 5.01e-07 | 52 |
foregut | 5.12e-07 | 87 |
thoracic cavity element | 7.38e-07 | 34 |
thoracic cavity | 7.38e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.95e-09 | 14 |
cell type cancer | 5.73e-08 | 143 |
carcinoma | 9.75e-08 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.