FFCP PHASE1:Hg19::chr1:203055129..203055147,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000188!2.10e-18!9;CL:0000594!1.08e-08!3;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0002590!9.46e-08!3;CL:0002603!2.45e-07!3;CL:0000183!3.84e-07!59;CL:0002540!7.09e-07!6;CL:0000055!8.68e-07!180 | |ontology_enrichment_celltype=CL:0000188!2.10e-18!9;CL:0000594!1.08e-08!3;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0002590!9.46e-08!3;CL:0002603!2.45e-07!3;CL:0000183!3.84e-07!59;CL:0002540!7.09e-07!6;CL:0000055!8.68e-07!180 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000188,7.30e-27,9;CL:0000594,3.59e-12,3;CL:0000680,4.89e-11,58;CL:0000056,4.89e-11,58;CL:0000355,4.89e-11,58;CL:0002540,8.63e-10,6;CL:0002575,8.49e-09,2;CL:0000515,1.04e-08,4;CL:0000187,2.34e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000515;9.08e-09;4!CL:0000355;1.24e-07;58 | |ontology_enrichment_development_v019=CL:0000515;9.08e-09;4!CL:0000355;1.24e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@MYOG | |short_description=p1@MYOG | ||
}} | }} |
Revision as of 06:01, 20 November 2012
Short description: | p1@MYOG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYOG_5end |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | 16bp_to_ENST00000241651_5end |
EntrezGene: | MYOG |
HGNC: | 7612 |
UniProt: | P15173 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.30e-27 | 9 |
skeletal muscle satellite cell | 3.59e-12 | 3 |
muscle precursor cell | 4.89e-11 | 58 |
myoblast | 4.89e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-11 | 58 |
mesenchymal stem cell of the bone marrow | 8.63e-10 | 6 |
central nervous system pericyte | 8.49e-09 | 2 |
skeletal muscle myoblast | 1.04e-08 | 4 |
muscle cell | 2.34e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.31e-17 | 62 |
striated muscle tissue | 2.31e-17 | 62 |
myotome | 2.31e-17 | 62 |
muscle tissue | 1.14e-16 | 64 |
musculature | 1.14e-16 | 64 |
musculature of body | 1.14e-16 | 64 |
somite | 1.48e-14 | 71 |
presomitic mesoderm | 1.48e-14 | 71 |
presumptive segmental plate | 1.48e-14 | 71 |
dermomyotome | 1.48e-14 | 71 |
trunk paraxial mesoderm | 1.48e-14 | 71 |
paraxial mesoderm | 2.73e-14 | 72 |
presumptive paraxial mesoderm | 2.73e-14 | 72 |
dense mesenchyme tissue | 4.98e-14 | 73 |
epithelial vesicle | 7.87e-13 | 78 |
multilaminar epithelium | 8.87e-12 | 83 |
trunk mesenchyme | 1.53e-09 | 122 |
muscle structure | 7.58e-09 | 2 |
muscle organ | 7.58e-09 | 2 |
throat | 8.82e-09 | 2 |
musculoskeletal system | 1.62e-08 | 167 |
open tracheal system trachea | 2.34e-08 | 2 |
unilaminar epithelium | 9.85e-08 | 148 |
mesenchyme | 7.70e-07 | 160 |
entire embryonic mesenchyme | 7.70e-07 | 160 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.