FFCP PHASE1:Hg19::chr6:160109243..160109285,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!6.73e-21!42;CL:0000860!1.45e-20!45;CL:0000766!1.04e-17!76;CL:0002194!1.12e-17!63;CL:0000576!1.12e-17!63;CL:0000040!1.12e-17!63;CL:0000559!1.12e-17!63;CL:0002009!4.39e-17!65;CL:0000839!3.39e-14!70;CL:0000557!1.03e-13!71;CL:0000763!1.38e-07!112;CL:0000049!1.38e-07!112 | |ontology_enrichment_celltype=CL:0002057!6.73e-21!42;CL:0000860!1.45e-20!45;CL:0000766!1.04e-17!76;CL:0002194!1.12e-17!63;CL:0000576!1.12e-17!63;CL:0000040!1.12e-17!63;CL:0000559!1.12e-17!63;CL:0002009!4.39e-17!65;CL:0000839!3.39e-14!70;CL:0000557!1.03e-13!71;CL:0000763!1.38e-07!112;CL:0000049!1.38e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-30;33!CL:0002057;1.29e-30;33!CL:0000473;2.61e-28;39!CL:0000234;2.61e-28;39!CL:0000576;1.15e-15;48!CL:0000766;1.69e-12;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.29e-30;33!CL:0002057;1.29e-30;33!CL:0000473;2.61e-28;39!CL:0000234;2.61e-28;39!CL:0000576;1.15e-15;48!CL:0000766;1.69e-12;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.22e-32,48;CL:0000234,1.22e-32,48;CL:0000860,5.57e-29,42;CL:0002057,5.57e-29,42;CL:0000766,4.41e-26,72;CL:0002194,2.78e-25,59;CL:0000576,2.78e-25,59;CL:0000040,2.78e-25,59;CL:0000559,2.78e-25,59;CL:0002009,5.86e-24,61;CL:0000839,5.13e-21,66;CL:0000557,1.75e-20,67;CL:0000763,1.26e-12,108;CL:0000049,1.26e-12,108;CL:0000738,4.13e-08,136;CL:0002087,5.61e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-22;42 | |ontology_enrichment_development_v019=CL:0002057;6.19e-22;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.92e-13!167;UBERON:0002193!3.26e-13!112;UBERON:0002390!1.61e-11!102;UBERON:0003061!1.61e-11!102;UBERON:0002371!2.17e-11!80;UBERON:0007023!4.49e-10!115;UBERON:0004765!1.44e-09!101;UBERON:0001434!1.44e-09!101;UBERON:0001474!1.78e-09!86;UBERON:0002405!1.82e-09!115 | |ontology_enrichment_uberon=UBERON:0002204!1.92e-13!167;UBERON:0002193!3.26e-13!112;UBERON:0002390!1.61e-11!102;UBERON:0003061!1.61e-11!102;UBERON:0002371!2.17e-11!80;UBERON:0007023!4.49e-10!115;UBERON:0004765!1.44e-09!101;UBERON:0001434!1.44e-09!101;UBERON:0001474!1.78e-09!86;UBERON:0002405!1.82e-09!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.29e-21,108;UBERON:0002390,8.50e-20,98;UBERON:0003061,8.50e-20,98;UBERON:0002371,3.01e-17,76;UBERON:0002204,1.81e-16,167;UBERON:0002405,4.18e-16,93;UBERON:0001474,6.00e-15,82;UBERON:0004765,1.46e-14,90;UBERON:0003081,1.86e-14,203;UBERON:0001434,2.59e-14,100;UBERON:0000926,5.08e-11,315;UBERON:0004120,5.08e-11,315;UBERON:0006603,5.08e-11,315;UBERON:0007023,4.29e-08,114;UBERON:0000178,9.34e-07,15;UBERON:0000179,9.34e-07,15;UBERON:0000463,9.34e-07,15 | |||
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| ||
|short_description=p8@SOD2 | |short_description=p8@SOD2 | ||
}} | }} |
Revision as of 22:58, 19 November 2012
Short description: | p8@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SOD2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 94bp_to_ENST00000535459_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.22e-32 | 48 |
phagocyte | 1.22e-32 | 48 |
classical monocyte | 5.57e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.57e-29 | 42 |
myeloid leukocyte | 4.41e-26 | 72 |
monopoietic cell | 2.78e-25 | 59 |
monocyte | 2.78e-25 | 59 |
monoblast | 2.78e-25 | 59 |
promonocyte | 2.78e-25 | 59 |
macrophage dendritic cell progenitor | 5.86e-24 | 61 |
myeloid lineage restricted progenitor cell | 5.13e-21 | 66 |
granulocyte monocyte progenitor cell | 1.75e-20 | 67 |
myeloid cell | 1.26e-12 | 108 |
common myeloid progenitor | 1.26e-12 | 108 |
leukocyte | 4.13e-08 | 136 |
nongranular leukocyte | 5.61e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.29e-21 | 108 |
hematopoietic system | 8.50e-20 | 98 |
blood island | 8.50e-20 | 98 |
bone marrow | 3.01e-17 | 76 |
musculoskeletal system | 1.81e-16 | 167 |
immune system | 4.18e-16 | 93 |
bone element | 6.00e-15 | 82 |
skeletal element | 1.46e-14 | 90 |
lateral plate mesoderm | 1.86e-14 | 203 |
skeletal system | 2.59e-14 | 100 |
mesoderm | 5.08e-11 | 315 |
mesoderm-derived structure | 5.08e-11 | 315 |
presumptive mesoderm | 5.08e-11 | 315 |
adult organism | 4.29e-08 | 114 |
blood | 9.34e-07 | 15 |
haemolymphatic fluid | 9.34e-07 | 15 |
organism substance | 9.34e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.