FFCP PHASE1:Hg19::chr17:48262782..48262783,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.84e-20!180;CL:0000057!1.77e-18!75;CL:0002620!1.17e-10!23;CL:0002334!2.58e-09!12;CL:0000048!4.20e-08!430;CL:0000723!1.30e-07!436;CL:0000034!5.50e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.84e-20!180;CL:0000057!1.77e-18!75;CL:0002620!1.17e-10!23;CL:0002334!2.58e-09!12;CL:0000048!4.20e-08!430;CL:0000723!1.30e-07!436;CL:0000034!5.50e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.45e-11;12!CL:0002579;4.20e-10;3!CL:0000135;6.93e-10;3!CL:0000388;6.93e-10;3!CL:0002615;8.43e-10;3!CL:0002580;8.43e-10;3!CL:0000197;7.24e-09;6!CL:0000098;7.24e-09;6!CL:0002167;7.24e-09;6!CL:0002569;2.00e-08;6!CL:0002620;3.79e-07;23 | |ontology_enrichment_celltype_v019=CL:0002334;1.45e-11;12!CL:0002579;4.20e-10;3!CL:0000135;6.93e-10;3!CL:0000388;6.93e-10;3!CL:0002615;8.43e-10;3!CL:0002580;8.43e-10;3!CL:0000197;7.24e-09;6!CL:0000098;7.24e-09;6!CL:0002167;7.24e-09;6!CL:0002569;2.00e-08;6!CL:0002620;3.79e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.41e-12,76;CL:0002334,1.66e-11,12;CL:0000135,4.16e-10,3;CL:0000388,4.16e-10,3;CL:0002580,5.81e-10,3;CL:0002579,6.97e-10,3;CL:0002615,1.09e-09,3;CL:0000197,7.20e-09,6;CL:0000098,7.20e-09,6;CL:0002167,7.20e-09,6;CL:0002569,2.01e-08,6;CL:0002620,3.04e-07,23;CL:0002561,9.27e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!5.60e-07!5;DOID:450!5.60e-07!5;DOID:66!5.60e-07!5;DOID:423!5.60e-07!5;DOID:0080000!5.60e-07!5;DOID:11722!5.60e-07!5 | |ontology_enrichment_disease=DOID:17!5.60e-07!5;DOID:450!5.60e-07!5;DOID:66!5.60e-07!5;DOID:423!5.60e-07!5;DOID:0080000!5.60e-07!5;DOID:11722!5.60e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;8.59e-10;5!DOID:450;8.59e-10;5!DOID:66;8.59e-10;5!DOID:423;8.59e-10;5!DOID:0080000;8.59e-10;5!DOID:11722;8.59e-10;5 | |ontology_enrichment_disease_v019=DOID:17;8.59e-10;5!DOID:450;8.59e-10;5!DOID:66;8.59e-10;5!DOID:423;8.59e-10;5!DOID:0080000;8.59e-10;5!DOID:11722;8.59e-10;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,5.10e-10,5;DOID:450,5.10e-10,5;DOID:66,5.10e-10,5;DOID:423,5.10e-10,5;DOID:0080000,5.10e-10,5;DOID:11722,5.10e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.00e-09!45;UBERON:0002416!5.00e-09!45;UBERON:0003688!1.59e-08!6;UBERON:0002358!1.59e-08!6;UBERON:0003684!1.59e-08!6;UBERON:0001178!1.59e-08!6;UBERON:0002097!8.01e-08!40;UBERON:0004457!2.85e-07!12;UBERON:0000042!2.85e-07!12;UBERON:0000914!9.81e-07!83;UBERON:0002329!9.81e-07!83;UBERON:0003077!9.81e-07!83;UBERON:0003059!9.81e-07!83;UBERON:0007282!9.81e-07!83;UBERON:0009618!9.81e-07!83;UBERON:0007285!9.81e-07!83 | |ontology_enrichment_uberon=UBERON:0002199!5.00e-09!45;UBERON:0002416!5.00e-09!45;UBERON:0003688!1.59e-08!6;UBERON:0002358!1.59e-08!6;UBERON:0003684!1.59e-08!6;UBERON:0001178!1.59e-08!6;UBERON:0002097!8.01e-08!40;UBERON:0004457!2.85e-07!12;UBERON:0000042!2.85e-07!12;UBERON:0000914!9.81e-07!83;UBERON:0002329!9.81e-07!83;UBERON:0003077!9.81e-07!83;UBERON:0003059!9.81e-07!83;UBERON:0007282!9.81e-07!83;UBERON:0009618!9.81e-07!83;UBERON:0007285!9.81e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.45e-18;6!UBERON:0002358;3.45e-18;6!UBERON:0003684;3.45e-18;6!UBERON:0001178;3.45e-18;6!UBERON:0004457;4.91e-16;9!UBERON:0000042;4.91e-16;9!UBERON:0003104;4.40e-11;7!UBERON:0009142;4.40e-11;7!UBERON:0007846;6.93e-10;3!UBERON:0000043;6.93e-10;3!UBERON:0007845;6.93e-10;3!UBERON:0002199;6.88e-09;46!UBERON:0002416;6.88e-09;46!UBERON:0003422;2.00e-08;6!UBERON:0002097;1.53e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.45e-18;6!UBERON:0002358;3.45e-18;6!UBERON:0003684;3.45e-18;6!UBERON:0001178;3.45e-18;6!UBERON:0004457;4.91e-16;9!UBERON:0000042;4.91e-16;9!UBERON:0003104;4.40e-11;7!UBERON:0009142;4.40e-11;7!UBERON:0007846;6.93e-10;3!UBERON:0000043;6.93e-10;3!UBERON:0007845;6.93e-10;3!UBERON:0002199;6.88e-09;46!UBERON:0002416;6.88e-09;46!UBERON:0003422;2.00e-08;6!UBERON:0002097;1.53e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.36e-18,6;UBERON:0002358,7.36e-18,6;UBERON:0003684,7.36e-18,6;UBERON:0001178,7.36e-18,6;UBERON:0004457,1.53e-11,12;UBERON:0000042,1.53e-11,12;UBERON:0002199,3.37e-11,46;UBERON:0002416,3.37e-11,46;UBERON:0007846,4.16e-10,3;UBERON:0000043,4.16e-10,3;UBERON:0007845,4.16e-10,3;UBERON:0002097,1.39e-09,41;UBERON:0003422,2.01e-08,6;UBERON:0003102,3.87e-07,99;UBERON:0005933,9.27e-07,2;UBERON:0005942,9.27e-07,2;UBERON:0005932,9.27e-07,2 | |||
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| ||
|short_description=p55@COL1A1 | |short_description=p55@COL1A1 | ||
}} | }} |
Revision as of 21:03, 19 November 2012
Short description: | p55@COL1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_55_at_COL1A1_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 117bp_to_J00113_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | P02452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.41e-12 | 76 |
preadipocyte | 1.66e-11 | 12 |
fibrocyte | 4.16e-10 | 3 |
tendon cell | 4.16e-10 | 3 |
preadipocyte of the breast | 5.81e-10 | 3 |
omentum preadipocyte | 6.97e-10 | 3 |
adipocyte of omentum tissue | 1.09e-09 | 3 |
receptor cell | 7.20e-09 | 6 |
sensory epithelial cell | 7.20e-09 | 6 |
olfactory epithelial cell | 7.20e-09 | 6 |
mesenchymal stem cell of umbilical cord | 2.01e-08 | 6 |
skin fibroblast | 3.04e-07 | 23 |
outer root sheath cell | 9.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.36e-18 | 6 |
peritoneum | 7.36e-18 | 6 |
abdominal cavity | 7.36e-18 | 6 |
visceral peritoneum | 7.36e-18 | 6 |
cavity lining | 1.53e-11 | 12 |
serous membrane | 1.53e-11 | 12 |
integument | 3.37e-11 | 46 |
integumental system | 3.37e-11 | 46 |
dense regular connective tissue | 4.16e-10 | 3 |
tendon | 4.16e-10 | 3 |
regular connective tissue | 4.16e-10 | 3 |
skin of body | 1.39e-09 | 41 |
mesenchyme of umbilical cord | 2.01e-08 | 6 |
surface structure | 3.87e-07 | 99 |
hair root sheath | 9.27e-07 | 2 |
hair outer root sheath | 9.27e-07 | 2 |
bulb of hair follicle | 9.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.10e-10 | 5 |
myotonic disease | 5.10e-10 | 5 |
muscle tissue disease | 5.10e-10 | 5 |
myopathy | 5.10e-10 | 5 |
muscular disease | 5.10e-10 | 5 |
myotonic dystrophy | 5.10e-10 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.