FFCP PHASE1:Hg19::chr17:73874641..73874653,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002078!7.34e-19!44;CL:0000115!2.23e-18!35;CL:0000213!1.94e-17!57;CL:0000215!1.94e-17!57;CL:0002139!5.89e-13!24;CL:0000066!1.22e-11!254;CL:0000071!2.15e-10!18;CL:0002546!2.15e-10!18;CL:0000222!2.53e-08!119;CL:0000076!1.46e-07!62;CL:0000220!1.55e-07!246;CL:0002321!3.60e-07!248 | |ontology_enrichment_celltype=CL:0002078!7.34e-19!44;CL:0000115!2.23e-18!35;CL:0000213!1.94e-17!57;CL:0000215!1.94e-17!57;CL:0002139!5.89e-13!24;CL:0000066!1.22e-11!254;CL:0000071!2.15e-10!18;CL:0002546!2.15e-10!18;CL:0000222!2.53e-08!119;CL:0000076!1.46e-07!62;CL:0000220!1.55e-07!246;CL:0002321!3.60e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.99e-19;36!CL:0002078;4.48e-17;45!CL:0002139;1.75e-16;24!CL:0000071;3.47e-12;18!CL:0000213;2.11e-09;58!CL:0000215;2.11e-09;58 | |ontology_enrichment_celltype_v019=CL:0000115;1.99e-19;36!CL:0002078;4.48e-17;45!CL:0002139;1.75e-16;24!CL:0000071;3.47e-12;18!CL:0000213;2.11e-09;58!CL:0000215;2.11e-09;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.59e-24,36;CL:0002078,6.26e-24,45;CL:0000213,8.98e-19,58;CL:0000215,8.98e-19,58;CL:0002139,1.96e-16,24;CL:0000071,2.50e-12,18;CL:0002546,2.50e-12,18;CL:0000222,7.43e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;3.47e-12;18 | |ontology_enrichment_development_v019=CL:0002546;3.47e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.50e-21!286;UBERON:0004111!4.82e-19!241;UBERON:0000467!1.86e-18!625;UBERON:0000480!3.26e-18!626;UBERON:0000483!1.00e-17!309;UBERON:0000119!1.80e-17!312;UBERON:0002050!9.82e-16!605;UBERON:0005423!9.82e-16!605;UBERON:0000923!1.84e-15!604;UBERON:0005291!1.84e-15!604;UBERON:0006598!1.84e-15!604;UBERON:0002532!1.84e-15!604;UBERON:0000922!1.93e-15!612;UBERON:0000468!2.05e-15!659;UBERON:0000025!1.19e-14!194;UBERON:0007023!4.97e-13!115;UBERON:0000481!3.03e-12!347;UBERON:0001986!2.15e-10!18;UBERON:0004638!2.15e-10!18;UBERON:0004852!2.15e-10!18;UBERON:0000062!2.51e-10!511;UBERON:0004121!2.53e-10!169;UBERON:0005743!3.23e-10!86;UBERON:0003075!4.96e-10!86;UBERON:0007284!4.96e-10!86;UBERON:0001049!1.37e-09!57;UBERON:0005068!1.37e-09!57;UBERON:0006241!1.37e-09!57;UBERON:0007135!1.37e-09!57;UBERON:0001017!2.10e-09!82;UBERON:0000924!2.82e-09!173;UBERON:0006601!2.82e-09!173;UBERON:0000064!3.12e-09!219;UBERON:0000955!3.24e-09!69;UBERON:0006238!3.24e-09!69;UBERON:0000475!4.46e-09!365;UBERON:0000033!5.50e-09!123;UBERON:0000153!1.07e-08!129;UBERON:0007811!1.07e-08!129;UBERON:0002346!1.45e-08!90;UBERON:0000073!3.18e-08!94;UBERON:0001016!3.18e-08!94;UBERON:0002616!1.01e-07!59;UBERON:0006914!2.43e-07!25;UBERON:0003103!3.11e-07!69;UBERON:0003914!4.52e-07!118;UBERON:0000487!8.05e-07!22 | |ontology_enrichment_uberon=UBERON:0000477!2.50e-21!286;UBERON:0004111!4.82e-19!241;UBERON:0000467!1.86e-18!625;UBERON:0000480!3.26e-18!626;UBERON:0000483!1.00e-17!309;UBERON:0000119!1.80e-17!312;UBERON:0002050!9.82e-16!605;UBERON:0005423!9.82e-16!605;UBERON:0000923!1.84e-15!604;UBERON:0005291!1.84e-15!604;UBERON:0006598!1.84e-15!604;UBERON:0002532!1.84e-15!604;UBERON:0000922!1.93e-15!612;UBERON:0000468!2.05e-15!659;UBERON:0000025!1.19e-14!194;UBERON:0007023!4.97e-13!115;UBERON:0000481!3.03e-12!347;UBERON:0001986!2.15e-10!18;UBERON:0004638!2.15e-10!18;UBERON:0004852!2.15e-10!18;UBERON:0000062!2.51e-10!511;UBERON:0004121!2.53e-10!169;UBERON:0005743!3.23e-10!86;UBERON:0003075!4.96e-10!86;UBERON:0007284!4.96e-10!86;UBERON:0001049!1.37e-09!57;UBERON:0005068!1.37e-09!57;UBERON:0006241!1.37e-09!57;UBERON:0007135!1.37e-09!57;UBERON:0001017!2.10e-09!82;UBERON:0000924!2.82e-09!173;UBERON:0006601!2.82e-09!173;UBERON:0000064!3.12e-09!219;UBERON:0000955!3.24e-09!69;UBERON:0006238!3.24e-09!69;UBERON:0000475!4.46e-09!365;UBERON:0000033!5.50e-09!123;UBERON:0000153!1.07e-08!129;UBERON:0007811!1.07e-08!129;UBERON:0002346!1.45e-08!90;UBERON:0000073!3.18e-08!94;UBERON:0001016!3.18e-08!94;UBERON:0002616!1.01e-07!59;UBERON:0006914!2.43e-07!25;UBERON:0003103!3.11e-07!69;UBERON:0003914!4.52e-07!118;UBERON:0000487!8.05e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.47e-12;18!UBERON:0001986;3.47e-12;18!UBERON:0004852;3.47e-12;18!UBERON:0006914;9.62e-11;25!UBERON:0000487;3.30e-09;22 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.47e-12;18!UBERON:0001986;3.47e-12;18!UBERON:0004852;3.47e-12;18!UBERON:0006914;9.62e-11;25!UBERON:0000487;3.30e-09;22 | ||
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| ||
|short_description=p5@TRIM47 | |short_description=p5@TRIM47 | ||
}} | }} |
Revision as of 15:59, 19 November 2012
Short description: | p5@TRIM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TRIM47_5end |
Coexpression cluster: | C3678_Mast_Mesenchymal_Renal_breast_Synoviocyte_myeloma_CD14 |
Association with transcript: | 2bp_to_ENST00000254816, NM_033452, uc002jpw.2_5end |
EntrezGene: | TRIM47 |
HGNC: | 19020 |
UniProt: | Q96LD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.59e-24 | 36 |
meso-epithelial cell | 6.26e-24 | 45 |
lining cell | 8.98e-19 | 58 |
barrier cell | 8.98e-19 | 58 |
endothelial cell of vascular tree | 1.96e-16 | 24 |
blood vessel endothelial cell | 2.50e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.50e-12 | 18 |
mesodermal cell | 7.43e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.95e-14 | 240 |
blood vessel endothelium | 2.50e-12 | 18 |
endothelium | 2.50e-12 | 18 |
cardiovascular system endothelium | 2.50e-12 | 18 |
tube | 1.19e-11 | 192 |
squamous epithelium | 7.57e-11 | 25 |
simple squamous epithelium | 2.54e-09 | 22 |
adult organism | 8.02e-09 | 114 |
epithelium | 2.85e-08 | 306 |
cell layer | 5.37e-08 | 309 |
epithelial tube | 1.62e-07 | 117 |
vessel | 4.16e-07 | 68 |
neural tube | 8.82e-07 | 56 |
neural rod | 8.82e-07 | 56 |
future spinal cord | 8.82e-07 | 56 |
neural keel | 8.82e-07 | 56 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.