FFCP PHASE1:Hg19::chr12:48276548..48276564,-: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0001014;1.20e-18;2!CL:0001016;1.20e-18;2!CL:0000840;1.10e-13;5!CL:0000451;7.62e-13;10!CL:0002032;7.22e-10;1!CL:0000557;7.22e-10;1!CL:0000990;2.67e-09;8!CL:0000097;4.01e-08;5!CL:0000453;5.30e-08;5 | |ontology_enrichment_celltype_v019=CL:0001014;1.20e-18;2!CL:0001016;1.20e-18;2!CL:0000840;1.10e-13;5!CL:0000451;7.62e-13;10!CL:0002032;7.22e-10;1!CL:0000557;7.22e-10;1!CL:0000990;2.67e-09;8!CL:0000097;4.01e-08;5!CL:0000453;5.30e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.20e-18,2;CL:0001016,1.20e-18,2;CL:0000840,1.23e-13,5;CL:0001029,1.23e-13,5;CL:0000451,8.63e-13,10;CL:0000990,2.87e-09,8;CL:0000988,1.70e-08,177;CL:0000097,4.01e-08,5;CL:0002028,4.01e-08,5;CL:0000453,5.31e-08,5;CL:0000557,3.86e-07,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.37e-10;1!DOID:0060061;2.37e-10;1!DOID:8691;2.37e-10;1 | |ontology_enrichment_disease_v019=DOID:0060060;2.37e-10;1!DOID:0060061;2.37e-10;1!DOID:8691;2.37e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.37e-10,1;DOID:0060061,2.37e-10,1;DOID:8691,2.37e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.55e-17!102;UBERON:0003061!2.55e-17!102;UBERON:0000178!3.16e-17!15;UBERON:0000179!3.16e-17!15;UBERON:0000463!3.16e-17!15;UBERON:0002193!7.93e-17!112;UBERON:0002371!6.11e-08!80;UBERON:0001474!6.00e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!2.55e-17!102;UBERON:0003061!2.55e-17!102;UBERON:0000178!3.16e-17!15;UBERON:0000179!3.16e-17!15;UBERON:0000463!3.16e-17!15;UBERON:0002193!7.93e-17!112;UBERON:0002371!6.11e-08!80;UBERON:0001474!6.00e-07!86 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.72e-28,15;UBERON:0000179,3.72e-28,15;UBERON:0000463,3.72e-28,15;UBERON:0002390,2.71e-17,98;UBERON:0003061,2.71e-17,98;UBERON:0002193,1.80e-15,108;UBERON:0002331,9.51e-09,10;UBERON:0000358,9.51e-09,10;UBERON:0000307,9.51e-09,10;UBERON:0000091,9.51e-09,10;UBERON:0000087,9.51e-09,10;UBERON:0007010,9.51e-09,10;UBERON:0007806,9.51e-09,10;UBERON:0008780,9.51e-09,10;UBERON:0005728,9.51e-09,10;UBERON:0003081,4.71e-07,203 | |||
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| ||
|short_description=p3@VDR | |short_description=p3@VDR | ||
}} | }} |
Revision as of 15:10, 19 November 2012
Short description: | p3@VDR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_VDR_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 153bp_to_ENST00000550314_5end |
EntrezGene: | VDR |
HGNC: | 12679 |
UniProt: | F8VVY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.20e-18 | 2 |
immature CD1a-positive Langerhans cell | 1.20e-18 | 2 |
immature conventional dendritic cell | 1.23e-13 | 5 |
common dendritic progenitor | 1.23e-13 | 5 |
dendritic cell | 8.63e-13 | 10 |
conventional dendritic cell | 2.87e-09 | 8 |
hematopoietic cell | 1.70e-08 | 177 |
mast cell | 4.01e-08 | 5 |
basophil mast progenitor cell | 4.01e-08 | 5 |
Langerhans cell | 5.31e-08 | 5 |
granulocyte monocyte progenitor cell | 3.86e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
blood | 3.72e-28 | 15 |
haemolymphatic fluid | 3.72e-28 | 15 |
organism substance | 3.72e-28 | 15 |
hematopoietic system | 2.71e-17 | 98 |
blood island | 2.71e-17 | 98 |
hemolymphoid system | 1.80e-15 | 108 |
umbilical cord | 9.51e-09 | 10 |
blastocyst | 9.51e-09 | 10 |
blastula | 9.51e-09 | 10 |
bilaminar disc | 9.51e-09 | 10 |
inner cell mass | 9.51e-09 | 10 |
cleaving embryo | 9.51e-09 | 10 |
connecting stalk | 9.51e-09 | 10 |
inner cell mass derived epiblast | 9.51e-09 | 10 |
extraembryonic mesoderm | 9.51e-09 | 10 |
lateral plate mesoderm | 4.71e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.37e-10 | 1 |
cutaneous T cell lymphoma | 2.37e-10 | 1 |
mycosis fungoides | 2.37e-10 | 1 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.