FFCP PHASE1:Hg19::chr10:115939008..115939073,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002556!3.92e-07!6;CL:0002552!4.05e-07!5 | |ontology_enrichment_celltype=CL:0002556!3.92e-07!6;CL:0002552!4.05e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002561;6.56e-11;2!CL:0002559;2.10e-09;5!CL:0002552;2.10e-09;5!CL:0000362;7.39e-09;9!CL:0000784;2.42e-07;3!CL:0000039;3.89e-07;7!CL:0000586;3.89e-07;7 | |ontology_enrichment_celltype_v019=CL:0002561;6.56e-11;2!CL:0002559;2.10e-09;5!CL:0002552;2.10e-09;5!CL:0000362;7.39e-09;9!CL:0000784;2.42e-07;3!CL:0000039;3.89e-07;7!CL:0000586;3.89e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002561,4.75e-11,2;CL:0002559,1.72e-09,5;CL:0002552,3.35e-09,5;CL:0000362,5.82e-09,9;CL:0000784,2.06e-07,3;CL:0000039,3.62e-07,7;CL:0000586,3.62e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.00e-13;10!UBERON:0005564;7.00e-13;10 | |ontology_enrichment_development_v019=UBERON:0009117;7.00e-13;10!UBERON:0005564;7.00e-13;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.04e-11;4!DOID:1612;1.04e-11;4!DOID:0050619;9.89e-07;1!DOID:1357;9.89e-07;1 | |ontology_enrichment_disease_v019=DOID:5093;1.04e-11;4!DOID:1612;1.04e-11;4!DOID:0050619;9.89e-07;1!DOID:1357;9.89e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,6.13e-12,4;DOID:1612,6.13e-12,4;DOID:0050619,9.91e-07,1;DOID:1357,9.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.75e-19!115;UBERON:0000153!2.15e-11!129;UBERON:0007811!2.15e-11!129;UBERON:0002616!5.33e-11!59;UBERON:0004121!5.46e-11!169;UBERON:0000924!2.41e-10!173;UBERON:0006601!2.41e-10!173;UBERON:0000033!4.18e-10!123;UBERON:0001049!4.35e-10!57;UBERON:0005068!4.35e-10!57;UBERON:0006241!4.35e-10!57;UBERON:0007135!4.35e-10!57;UBERON:0002780!1.22e-09!41;UBERON:0001890!1.22e-09!41;UBERON:0006240!1.22e-09!41;UBERON:0001869!1.73e-09!32;UBERON:0003080!2.97e-09!42;UBERON:0000955!1.13e-08!69;UBERON:0006238!1.13e-08!69;UBERON:0001893!1.30e-08!34;UBERON:0001017!1.34e-08!82;UBERON:0002020!1.42e-08!34;UBERON:0003528!1.42e-08!34;UBERON:0002791!5.99e-08!33;UBERON:0002619!8.15e-08!22;UBERON:0005743!9.11e-08!86;UBERON:0000956!2.52e-07!25;UBERON:0000203!2.52e-07!25;UBERON:0001758!3.92e-07!6;UBERON:0003672!3.92e-07!6;UBERON:0003075!5.53e-07!86;UBERON:0007284!5.53e-07!86;UBERON:0000073!8.30e-07!94;UBERON:0001016!8.30e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!3.75e-19!115;UBERON:0000153!2.15e-11!129;UBERON:0007811!2.15e-11!129;UBERON:0002616!5.33e-11!59;UBERON:0004121!5.46e-11!169;UBERON:0000924!2.41e-10!173;UBERON:0006601!2.41e-10!173;UBERON:0000033!4.18e-10!123;UBERON:0001049!4.35e-10!57;UBERON:0005068!4.35e-10!57;UBERON:0006241!4.35e-10!57;UBERON:0007135!4.35e-10!57;UBERON:0002780!1.22e-09!41;UBERON:0001890!1.22e-09!41;UBERON:0006240!1.22e-09!41;UBERON:0001869!1.73e-09!32;UBERON:0003080!2.97e-09!42;UBERON:0000955!1.13e-08!69;UBERON:0006238!1.13e-08!69;UBERON:0001893!1.30e-08!34;UBERON:0001017!1.34e-08!82;UBERON:0002020!1.42e-08!34;UBERON:0003528!1.42e-08!34;UBERON:0002791!5.99e-08!33;UBERON:0002619!8.15e-08!22;UBERON:0005743!9.11e-08!86;UBERON:0000956!2.52e-07!25;UBERON:0000203!2.52e-07!25;UBERON:0001758!3.92e-07!6;UBERON:0003672!3.92e-07!6;UBERON:0003075!5.53e-07!86;UBERON:0007284!5.53e-07!86;UBERON:0000073!8.30e-07!94;UBERON:0001016!8.30e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.59e-16;8!UBERON:0003135;1.10e-11;11!UBERON:0005933;6.56e-11;2!UBERON:0005942;6.56e-11;2!UBERON:0005932;6.56e-11;2!UBERON:0001828;4.19e-10;8!UBERON:0002073;2.10e-09;5!UBERON:0001003;6.50e-08;15!UBERON:0007376;6.50e-08;15!UBERON:0003101;7.57e-08;22!UBERON:0000079;7.57e-08;22!UBERON:0001764;9.89e-07;1!UBERON:0001825;9.89e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.59e-16;8!UBERON:0003135;1.10e-11;11!UBERON:0005933;6.56e-11;2!UBERON:0005942;6.56e-11;2!UBERON:0005932;6.56e-11;2!UBERON:0001828;4.19e-10;8!UBERON:0002073;2.10e-09;5!UBERON:0001003;6.50e-08;15!UBERON:0007376;6.50e-08;15!UBERON:0003101;7.57e-08;22!UBERON:0000079;7.57e-08;22!UBERON:0001764;9.89e-07;1!UBERON:0001825;9.89e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.24e-16,8;UBERON:0003135,1.03e-11,11;UBERON:0005933,4.75e-11,2;UBERON:0005942,4.75e-11,2;UBERON:0005932,4.75e-11,2;UBERON:0001828,6.16e-10,8;UBERON:0002073,1.72e-09,5;UBERON:0005086,1.72e-09,5;UBERON:0001003,5.43e-08,15;UBERON:0007376,5.43e-08,15;UBERON:0007383,5.43e-08,15;UBERON:0003102,7.88e-08,99;UBERON:0003101,8.49e-08,22;UBERON:0000079,8.49e-08,22;UBERON:0004923,8.45e-07,66;UBERON:0001764,9.91e-07,1;UBERON:0001825,9.91e-07,1 | |||
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| ||
|short_description=p1@TDRD1 | |short_description=p1@TDRD1 | ||
}} | }} |
Revision as of 05:42, 19 November 2012
Short description: | p1@TDRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TDRD1_5end |
Coexpression cluster: | C2981_maxillary_testicular_testis_renal_keratoacanthoma_liposarcoma_breast |
Association with transcript: | 0bp_to_ENST00000251864, ENST00000369281, ENST00000369282, ENST00000422662, NM_198795, uc001lbf.2, uc001lbg.1, uc001lbh.1_5end |
EntrezGene: | TDRD1 |
HGNC: | 11712 |
UniProt: | Q9BXT4B7WPM2C9JRE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 4.75e-11 | 2 |
hair follicle cell | 1.72e-09 | 5 |
fibroblast of gingiva | 3.35e-09 | 5 |
epidermal cell | 5.82e-09 | 9 |
plasmacytoid dendritic cell | 2.06e-07 | 3 |
germ line cell | 3.62e-07 | 7 |
germ cell | 3.62e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.24e-16 | 8 |
male reproductive organ | 1.03e-11 | 11 |
hair root sheath | 4.75e-11 | 2 |
hair outer root sheath | 4.75e-11 | 2 |
bulb of hair follicle | 4.75e-11 | 2 |
gingiva | 6.16e-10 | 8 |
hair follicle | 1.72e-09 | 5 |
hair follicle placode | 1.72e-09 | 5 |
skin epidermis | 5.43e-08 | 15 |
outer epithelium | 5.43e-08 | 15 |
enveloping layer of ectoderm | 5.43e-08 | 15 |
surface structure | 7.88e-08 | 99 |
male organism | 8.49e-08 | 22 |
male reproductive system | 8.49e-08 | 22 |
organ component layer | 8.45e-07 | 66 |
maxillary sinus | 9.91e-07 | 1 |
paranasal sinus | 9.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.13e-12 | 4 |
breast cancer | 6.13e-12 | 4 |
paranasal sinus cancer | 9.91e-07 | 1 |
maxillary sinus cancer | 9.91e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.