FFCP PHASE1:Hg19::chr9:117880477..117880491,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.15e-19!180;CL:0000057!1.48e-10!75;CL:0002620!1.40e-08!23 | |ontology_enrichment_celltype=CL:0000055!1.15e-19!180;CL:0000057!1.48e-10!75;CL:0002620!1.40e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.00e-09;23 | |ontology_enrichment_celltype_v019=CL:0002620;8.00e-09;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.74e-09,23;CL:0000057,8.23e-09,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.35e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;6.35e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.95e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.33e-14!365;UBERON:0000481!5.59e-13!347;UBERON:0000468!1.21e-12!659;UBERON:0003102!9.62e-12!95;UBERON:0000486!2.51e-10!82;UBERON:0000914!9.00e-10!83;UBERON:0002329!9.00e-10!83;UBERON:0003077!9.00e-10!83;UBERON:0003059!9.00e-10!83;UBERON:0007282!9.00e-10!83;UBERON:0009618!9.00e-10!83;UBERON:0007285!9.00e-10!83;UBERON:0000467!2.71e-09!625;UBERON:0000922!4.21e-09!612;UBERON:0000480!4.23e-09!626;UBERON:0002050!1.02e-08!605;UBERON:0005423!1.02e-08!605;UBERON:0000923!2.09e-08!604;UBERON:0005291!2.09e-08!604;UBERON:0006598!2.09e-08!604;UBERON:0002532!2.09e-08!604;UBERON:0005256!3.98e-08!143;UBERON:0003104!7.91e-08!238;UBERON:0009142!7.91e-08!238;UBERON:0002199!2.00e-07!45;UBERON:0002416!2.00e-07!45;UBERON:0002100!2.30e-07!216;UBERON:0004290!2.63e-07!70;UBERON:0002097!8.05e-07!40 | |ontology_enrichment_uberon=UBERON:0000475!4.33e-14!365;UBERON:0000481!5.59e-13!347;UBERON:0000468!1.21e-12!659;UBERON:0003102!9.62e-12!95;UBERON:0000486!2.51e-10!82;UBERON:0000914!9.00e-10!83;UBERON:0002329!9.00e-10!83;UBERON:0003077!9.00e-10!83;UBERON:0003059!9.00e-10!83;UBERON:0007282!9.00e-10!83;UBERON:0009618!9.00e-10!83;UBERON:0007285!9.00e-10!83;UBERON:0000467!2.71e-09!625;UBERON:0000922!4.21e-09!612;UBERON:0000480!4.23e-09!626;UBERON:0002050!1.02e-08!605;UBERON:0005423!1.02e-08!605;UBERON:0000923!2.09e-08!604;UBERON:0005291!2.09e-08!604;UBERON:0006598!2.09e-08!604;UBERON:0002532!2.09e-08!604;UBERON:0005256!3.98e-08!143;UBERON:0003104!7.91e-08!238;UBERON:0009142!7.91e-08!238;UBERON:0002199!2.00e-07!45;UBERON:0002416!2.00e-07!45;UBERON:0002100!2.30e-07!216;UBERON:0004290!2.63e-07!70;UBERON:0002097!8.05e-07!40 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.47e-13,99;UBERON:0000486,1.14e-10,83;UBERON:0002199,4.06e-08,46;UBERON:0002416,4.06e-08,46;UBERON:0007524,1.33e-07,73;UBERON:0002329,1.42e-07,71;UBERON:0003059,1.42e-07,71;UBERON:0007282,1.42e-07,71;UBERON:0004290,1.42e-07,71;UBERON:0009618,1.42e-07,71;UBERON:0002097,2.52e-07,41;UBERON:0003077,2.94e-07,72;UBERON:0007285,2.94e-07,72;UBERON:0007503,6.65e-07,78 | |||
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| ||
|short_description=p2@TNC | |short_description=p2@TNC | ||
}} | }} |
Revision as of 17:54, 18 November 2012
Short description: | p2@TNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TNC_5end |
Coexpression cluster: | C864_Chondrocyte_peripheral_Fibroblast_Adipocyte_mesenchymal_Neural_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000340094, ENST00000345230, ENST00000346706, ENST00000442945, ENST00000534839, ENST00000535648, uc004bjj.3_5end |
EntrezGene: | TNC |
HGNC: | 5318 |
UniProt: | P24821E7EVS8F5H5D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.74e-09 | 23 |
fibroblast | 8.23e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.47e-13 | 99 |
multilaminar epithelium | 1.14e-10 | 83 |
integument | 4.06e-08 | 46 |
integumental system | 4.06e-08 | 46 |
dense mesenchyme tissue | 1.33e-07 | 73 |
somite | 1.42e-07 | 71 |
presomitic mesoderm | 1.42e-07 | 71 |
presumptive segmental plate | 1.42e-07 | 71 |
dermomyotome | 1.42e-07 | 71 |
trunk paraxial mesoderm | 1.42e-07 | 71 |
skin of body | 2.52e-07 | 41 |
paraxial mesoderm | 2.94e-07 | 72 |
presumptive paraxial mesoderm | 2.94e-07 | 72 |
epithelial vesicle | 6.65e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.95e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.