FFCP PHASE1:Hg19::chr11:85430163..85430200,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!4.19e-24!180;CL:0000680!8.05e-17!57;CL:0000056!8.05e-17!57;CL:0000355!8.05e-17!57;CL:0000187!1.39e-15!54;CL:0000393!3.08e-15!60;CL:0000211!3.08e-15!60;CL:0000183!2.86e-14!59;CL:0000192!3.51e-11!42;CL:0000514!3.51e-11!42;CL:0000359!1.64e-10!32;CL:0002620!8.24e-10!23;CL:0000057!2.25e-07!75 | |ontology_enrichment_celltype=CL:0000055!4.19e-24!180;CL:0000680!8.05e-17!57;CL:0000056!8.05e-17!57;CL:0000355!8.05e-17!57;CL:0000187!1.39e-15!54;CL:0000393!3.08e-15!60;CL:0000211!3.08e-15!60;CL:0000183!2.86e-14!59;CL:0000192!3.51e-11!42;CL:0000514!3.51e-11!42;CL:0000359!1.64e-10!32;CL:0002620!8.24e-10!23;CL:0000057!2.25e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.92e-12;23!CL:0000359;1.56e-10;32!CL:0000187;7.10e-07;55!CL:0000192;8.39e-07;43 | |ontology_enrichment_celltype_v019=CL:0002620;3.92e-12;23!CL:0000359;1.56e-10;32!CL:0000187;7.10e-07;55!CL:0000192;8.39e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.52e-12,23;CL:0000680,2.65e-12,58;CL:0000056,2.65e-12,58;CL:0000355,2.65e-12,58;CL:0000187,2.05e-11,55;CL:0000393,3.42e-10,61;CL:0000211,3.42e-10,61;CL:0000359,3.98e-10,32;CL:0000192,1.92e-08,43;CL:0000514,1.92e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000514;8.39e-07;43 | |ontology_enrichment_development_v019=CL:0000514;8.39e-07;43 | ||
|ontology_enrichment_disease=DOID:193!2.51e-08!29;DOID:120!4.49e-08!27;DOID:2394!4.16e-07!14 | |ontology_enrichment_disease=DOID:193!2.51e-08!29;DOID:120!4.49e-08!27;DOID:2394!4.16e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:120;1.65e-11;27!DOID:193;2.59e-10;29!DOID:2394;1.86e-08;14!DOID:17;2.07e-07;5!DOID:450;2.07e-07;5!DOID:66;2.07e-07;5!DOID:423;2.07e-07;5!DOID:0080000;2.07e-07;5!DOID:11722;2.07e-07;5 | |ontology_enrichment_disease_v019=DOID:120;1.65e-11;27!DOID:193;2.59e-10;29!DOID:2394;1.86e-08;14!DOID:17;2.07e-07;5!DOID:450;2.07e-07;5!DOID:66;2.07e-07;5!DOID:423;2.07e-07;5!DOID:0080000;2.07e-07;5!DOID:11722;2.07e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:120,1.07e-11,27;DOID:193,1.74e-10,29;DOID:2394,1.65e-08,14;DOID:17,2.54e-07,5;DOID:450,2.54e-07,5;DOID:66,2.54e-07,5;DOID:423,2.54e-07,5;DOID:0080000,2.54e-07,5;DOID:11722,2.54e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.16e-23!365;UBERON:0000914!1.53e-16!83;UBERON:0002329!1.53e-16!83;UBERON:0003077!1.53e-16!83;UBERON:0003059!1.53e-16!83;UBERON:0007282!1.53e-16!83;UBERON:0009618!1.53e-16!83;UBERON:0007285!1.53e-16!83;UBERON:0002385!2.14e-15!63;UBERON:0001015!2.14e-15!63;UBERON:0000383!2.14e-15!63;UBERON:0004290!2.41e-15!70;UBERON:0001134!3.65e-15!61;UBERON:0002036!3.65e-15!61;UBERON:0003082!3.65e-15!61;UBERON:0000483!5.71e-15!309;UBERON:0000119!2.40e-14!312;UBERON:0000486!2.17e-12!82;UBERON:0000481!2.34e-12!347;UBERON:0005256!3.79e-12!143;UBERON:0005743!4.26e-12!86;UBERON:0000073!1.37e-11!94;UBERON:0001016!1.37e-11!94;UBERON:0001017!2.82e-11!82;UBERON:0003075!4.04e-10!86;UBERON:0007284!4.04e-10!86;UBERON:0001893!5.29e-10!34;UBERON:0001869!6.91e-10!32;UBERON:0000468!1.12e-09!659;UBERON:0002020!1.21e-09!34;UBERON:0003528!1.21e-09!34;UBERON:0000955!1.30e-09!69;UBERON:0006238!1.30e-09!69;UBERON:0002100!1.31e-09!216;UBERON:0001049!1.40e-09!57;UBERON:0005068!1.40e-09!57;UBERON:0006241!1.40e-09!57;UBERON:0007135!1.40e-09!57;UBERON:0002791!1.87e-09!33;UBERON:0002616!3.73e-09!59;UBERON:0000956!6.00e-09!25;UBERON:0000203!6.00e-09!25;UBERON:0000025!6.88e-09!194;UBERON:0002346!7.21e-09!90;UBERON:0000467!8.34e-09!625;UBERON:0000480!1.13e-08!626;UBERON:0002780!2.67e-08!41;UBERON:0001890!2.67e-08!41;UBERON:0006240!2.67e-08!41;UBERON:0000477!5.25e-08!286;UBERON:0000033!6.25e-08!123;UBERON:0002619!6.95e-08!22;UBERON:0003056!7.42e-08!61;UBERON:0003080!7.44e-08!42;UBERON:0000153!8.30e-08!129;UBERON:0007811!8.30e-08!129;UBERON:0001950!2.54e-07!20;UBERON:0004111!3.21e-07!241;UBERON:0007023!3.58e-07!115;UBERON:0004121!4.66e-07!169 | |ontology_enrichment_uberon=UBERON:0000475!4.16e-23!365;UBERON:0000914!1.53e-16!83;UBERON:0002329!1.53e-16!83;UBERON:0003077!1.53e-16!83;UBERON:0003059!1.53e-16!83;UBERON:0007282!1.53e-16!83;UBERON:0009618!1.53e-16!83;UBERON:0007285!1.53e-16!83;UBERON:0002385!2.14e-15!63;UBERON:0001015!2.14e-15!63;UBERON:0000383!2.14e-15!63;UBERON:0004290!2.41e-15!70;UBERON:0001134!3.65e-15!61;UBERON:0002036!3.65e-15!61;UBERON:0003082!3.65e-15!61;UBERON:0000483!5.71e-15!309;UBERON:0000119!2.40e-14!312;UBERON:0000486!2.17e-12!82;UBERON:0000481!2.34e-12!347;UBERON:0005256!3.79e-12!143;UBERON:0005743!4.26e-12!86;UBERON:0000073!1.37e-11!94;UBERON:0001016!1.37e-11!94;UBERON:0001017!2.82e-11!82;UBERON:0003075!4.04e-10!86;UBERON:0007284!4.04e-10!86;UBERON:0001893!5.29e-10!34;UBERON:0001869!6.91e-10!32;UBERON:0000468!1.12e-09!659;UBERON:0002020!1.21e-09!34;UBERON:0003528!1.21e-09!34;UBERON:0000955!1.30e-09!69;UBERON:0006238!1.30e-09!69;UBERON:0002100!1.31e-09!216;UBERON:0001049!1.40e-09!57;UBERON:0005068!1.40e-09!57;UBERON:0006241!1.40e-09!57;UBERON:0007135!1.40e-09!57;UBERON:0002791!1.87e-09!33;UBERON:0002616!3.73e-09!59;UBERON:0000956!6.00e-09!25;UBERON:0000203!6.00e-09!25;UBERON:0000025!6.88e-09!194;UBERON:0002346!7.21e-09!90;UBERON:0000467!8.34e-09!625;UBERON:0000480!1.13e-08!626;UBERON:0002780!2.67e-08!41;UBERON:0001890!2.67e-08!41;UBERON:0006240!2.67e-08!41;UBERON:0000477!5.25e-08!286;UBERON:0000033!6.25e-08!123;UBERON:0002619!6.95e-08!22;UBERON:0003056!7.42e-08!61;UBERON:0003080!7.44e-08!42;UBERON:0000153!8.30e-08!129;UBERON:0007811!8.30e-08!129;UBERON:0001950!2.54e-07!20;UBERON:0004111!3.21e-07!241;UBERON:0007023!3.58e-07!115;UBERON:0004121!4.66e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.02e-09;25!UBERON:0000203;2.02e-09;25!UBERON:0001950;9.19e-09;20!UBERON:0002619;9.93e-09;22!UBERON:0002097;2.75e-08;41!UBERON:0001869;9.59e-08;32!UBERON:0001893;3.55e-07;34!UBERON:0002385;5.44e-07;31!UBERON:0001015;5.44e-07;31!UBERON:0000383;5.44e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0000956;2.02e-09;25!UBERON:0000203;2.02e-09;25!UBERON:0001950;9.19e-09;20!UBERON:0002619;9.93e-09;22!UBERON:0002097;2.75e-08;41!UBERON:0001869;9.59e-08;32!UBERON:0001893;3.55e-07;34!UBERON:0002385;5.44e-07;31!UBERON:0001015;5.44e-07;31!UBERON:0000383;5.44e-07;31 | ||
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| ||
|short_description=p3@SYTL2 | |short_description=p3@SYTL2 | ||
}} | }} |
Revision as of 04:01, 18 November 2012
Short description: | p3@SYTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SYTL2_5end |
Coexpression cluster: | C3209_renal_anaplastic_Fibroblast_mesenchymal_clear_mucinous_glioblastoma |
Association with transcript: | 0bp_to_ENST00000529581, ENST00000533577, ENST00000534414, NM_206929, uc001pax.2, uc010rte.1_5end |
EntrezGene: | SYTL2 |
HGNC: | 15585 |
UniProt: | E9PN06Q9HCH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.52e-12 | 23 |
muscle precursor cell | 2.65e-12 | 58 |
myoblast | 2.65e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-12 | 58 |
muscle cell | 2.05e-11 | 55 |
electrically responsive cell | 3.42e-10 | 61 |
electrically active cell | 3.42e-10 | 61 |
vascular associated smooth muscle cell | 3.98e-10 | 32 |
smooth muscle cell | 1.92e-08 | 43 |
smooth muscle myoblast | 1.92e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
paraxial mesoderm | 3.34e-11 | 72 |
presumptive paraxial mesoderm | 3.34e-11 | 72 |
dense mesenchyme tissue | 6.62e-11 | 73 |
skeletal muscle tissue | 6.93e-11 | 62 |
striated muscle tissue | 6.93e-11 | 62 |
myotome | 6.93e-11 | 62 |
skin of body | 1.00e-10 | 41 |
somite | 1.33e-10 | 71 |
presomitic mesoderm | 1.33e-10 | 71 |
presumptive segmental plate | 1.33e-10 | 71 |
dermomyotome | 1.33e-10 | 71 |
trunk paraxial mesoderm | 1.33e-10 | 71 |
muscle tissue | 2.99e-10 | 64 |
musculature | 2.99e-10 | 64 |
musculature of body | 2.99e-10 | 64 |
integument | 1.17e-09 | 46 |
integumental system | 1.17e-09 | 46 |
cerebral cortex | 3.07e-09 | 25 |
pallium | 3.07e-09 | 25 |
multilaminar epithelium | 4.85e-09 | 83 |
epithelial vesicle | 9.11e-09 | 78 |
neocortex | 1.02e-08 | 20 |
regional part of cerebral cortex | 1.32e-08 | 22 |
epithelium | 1.88e-08 | 306 |
central nervous system | 2.41e-08 | 81 |
cerebral hemisphere | 2.86e-08 | 32 |
cell layer | 3.71e-08 | 309 |
nervous system | 5.71e-08 | 89 |
telencephalon | 1.70e-07 | 34 |
brain | 2.34e-07 | 68 |
future brain | 2.34e-07 | 68 |
regional part of telencephalon | 3.39e-07 | 32 |
trunk mesenchyme | 3.73e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.07e-11 | 27 |
reproductive organ cancer | 1.74e-10 | 29 |
ovarian cancer | 1.65e-08 | 14 |
musculoskeletal system disease | 2.54e-07 | 5 |
myotonic disease | 2.54e-07 | 5 |
muscle tissue disease | 2.54e-07 | 5 |
myopathy | 2.54e-07 | 5 |
muscular disease | 2.54e-07 | 5 |
myotonic dystrophy | 2.54e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.