FFCP PHASE1:Hg19::chr20:46988646..46988664,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000945!4.83e-37!24;CL:0000826!4.83e-37!24;CL:0000236!4.49e-25!14;CL:0000542!1.01e-16!53;CL:0000051!1.01e-16!53;CL:0000838!1.10e-15!52;CL:0002087!5.10e-07!119;CL:0000738!6.54e-07!140 | |ontology_enrichment_celltype=CL:0000945!4.83e-37!24;CL:0000826!4.83e-37!24;CL:0000236!4.49e-25!14;CL:0000542!1.01e-16!53;CL:0000051!1.01e-16!53;CL:0000838!1.10e-15!52;CL:0002087!5.10e-07!119;CL:0000738!6.54e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.55e-51;24!CL:0000236;6.23e-42;13!CL:0000542;4.31e-16;53 | |ontology_enrichment_celltype_v019=CL:0000945;5.55e-51;24!CL:0000236;6.23e-42;13!CL:0000542;4.31e-16;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.90e-51,24;CL:0000826,3.90e-51,24;CL:0000236,1.07e-45,14;CL:0000542,2.16e-26,53;CL:0000051,2.16e-26,53;CL:0000838,3.34e-24,52;CL:0002087,1.24e-09,115;CL:0000738,1.58e-08,136;CL:0002031,5.06e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;4.31e-16;53!UBERON:0004872;3.77e-10;7 | |ontology_enrichment_development_v019=CL:0000051;4.31e-16;53!UBERON:0004872;3.77e-10;7 | ||
|ontology_enrichment_disease=DOID:0060058!1.70e-08!10;DOID:299!3.79e-07!25 | |ontology_enrichment_disease=DOID:0060058!1.70e-08!10;DOID:299!3.79e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.70e-11;10 | |ontology_enrichment_disease_v019=DOID:0060058;5.70e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.42e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.81e-09!35;UBERON:0000178!3.25e-09!15;UBERON:0000179!3.25e-09!15;UBERON:0000463!3.25e-09!15;UBERON:0000945!5.45e-08!8;UBERON:0010039!5.45e-08!8 | |ontology_enrichment_uberon=UBERON:0005409!1.81e-09!35;UBERON:0000178!3.25e-09!15;UBERON:0000179!3.25e-09!15;UBERON:0000463!3.25e-09!15;UBERON:0000945!5.45e-08!8;UBERON:0010039!5.45e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.75e-21;5!UBERON:0005057;1.75e-21;5!UBERON:0002106;7.47e-14;3!UBERON:0002370;2.25e-09;2!UBERON:0005058;2.25e-09;2!UBERON:0009113;2.25e-09;2!UBERON:0002405;5.44e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0004177;1.75e-21;5!UBERON:0005057;1.75e-21;5!UBERON:0002106;7.47e-14;3!UBERON:0002370;2.25e-09;2!UBERON:0005058;2.25e-09;2!UBERON:0009113;2.25e-09;2!UBERON:0002405;5.44e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.31e-15,7;UBERON:0005057,2.31e-15,7;UBERON:0002106,8.36e-14,3;UBERON:0004854,8.36e-14,3;UBERON:0009034,8.36e-14,3;UBERON:0002095,8.36e-14,3;UBERON:0004782,8.36e-14,3;UBERON:0003281,8.36e-14,3;UBERON:0009664,8.36e-14,3;UBERON:0002296,8.36e-14,3;UBERON:0005602,8.36e-14,3;UBERON:0001179,8.36e-14,3;UBERON:0006293,8.36e-14,3;UBERON:0000945,2.17e-13,8;UBERON:0010039,2.17e-13,8;UBERON:0005409,1.57e-09,25 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.80621296789881,0.944529375764151,0,0.383829398097213,0.464448369948228,0,0,0,0.92960640696362,2.13253848731132,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,5.27988733383968,12.561188059029,8.89509253863555,4.26730222566507,8.00791974072025,9.19603903927173,10.5767179645578,8.58648379081828,9.67662047486062,8.80855784056408,14.5263826687587,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0.174129737299267,0,0.953962497221368,0.571994910780128,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.952927101831156,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,1.11481905075431,0.28853842595289,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,5.01495229248653,0,0,0,0,0,0,0,0,0,0.398495976502139,2.48655523978033,0,0,0.861593638227486,0,0,0,0,0,4.7896618469388,0,0,0,0,0.7812832832557,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.91227394607833,1.17398771359254,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,1.19885765749278,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4846354574708,0.709048640765013,0.741742725430498,0.606631894687664,0,1.6087933092499,0,0,0.321506296930038,0,0,0,0,0,0,0.788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.342173675768659,0,0,0.314408610199332,0,7.44249032717926,1.38328142328561,2.80122976276061,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,3.40068998299204,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,1.13831095675649,0,1.26757386311357,0,0,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,1.4541206133713,2.25745537315059,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,2.34959794949634,1.4180735354187,4.09758739292209,0,0,0,0.730336388246517,1.83491713361816,0,0,0.0679914901909147,0,0,0,0,0,0,0.764859003745869,0,0.509944148709909,0.26721740526556,0,0,2.42491834298366,5.62724673327975,0,0,0.426467963801962,0.23806443146374,1.80848947540817,1.42771842880473,0,0,0,0,0,1.75115337837928,0.143444410785353,0,0.0814032686109745,0,0,0.359300808426348,0,0.122241444182866,0,0,1.20764276154616,1.60284246151616 | ||
|short_description=p1@LINC00494 | |short_description=p1@LINC00494 | ||
}} | }} |
Revision as of 02:59, 18 November 2012
Short description: | p1@LINC00494 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LINC00494_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_NR_026958, uc002xtt.2_5end |
EntrezGene: | LINC00494 |
HGNC: | 27657 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.90e-51 | 24 |
pro-B cell | 3.90e-51 | 24 |
B cell | 1.07e-45 | 14 |
lymphocyte | 2.16e-26 | 53 |
common lymphoid progenitor | 2.16e-26 | 53 |
lymphoid lineage restricted progenitor cell | 3.34e-24 | 52 |
nongranular leukocyte | 1.24e-09 | 115 |
leukocyte | 1.58e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 5.06e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.31e-15 | 7 |
immune organ | 2.31e-15 | 7 |
spleen | 8.36e-14 | 3 |
gastrointestinal system mesentery | 8.36e-14 | 3 |
stomach region | 8.36e-14 | 3 |
mesentery | 8.36e-14 | 3 |
gastrointestinal system serosa | 8.36e-14 | 3 |
mesentery of stomach | 8.36e-14 | 3 |
gut mesentery | 8.36e-14 | 3 |
dorsal mesentery | 8.36e-14 | 3 |
dorsal mesogastrium | 8.36e-14 | 3 |
peritoneal cavity | 8.36e-14 | 3 |
spleen primordium | 8.36e-14 | 3 |
stomach | 2.17e-13 | 8 |
food storage organ | 2.17e-13 | 8 |
gastrointestinal system | 1.57e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.42e-11 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.