FFCP PHASE1:Hg19::chr5:112540287..112540317,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000223!9.27e-10!59;CL:0002076!6.49e-09!43;CL:0002077!5.98e-07!33;CL:0000221!7.48e-07!71;CL:0000148!7.49e-07!10;CL:0000541!7.49e-07!10;CL:0000622!9.12e-07!5 | |ontology_enrichment_celltype=CL:0000223!9.27e-10!59;CL:0002076!6.49e-09!43;CL:0002077!5.98e-07!33;CL:0000221!7.48e-07!71;CL:0000148!7.49e-07!10;CL:0000541!7.49e-07!10;CL:0000622!9.12e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000150;5.32e-12;9!CL:0000622;1.07e-11;5!CL:0002251;4.43e-10;20!CL:0000154;1.12e-09;6!CL:0002076;1.56e-09;42!CL:0002077;1.77e-09;34!CL:0000240;1.12e-08;6!CL:0000311;1.12e-08;6!CL:0000079;1.12e-08;6!CL:0000237;1.12e-08;6!CL:0000148;1.29e-08;10!CL:0002159;1.50e-08;14!CL:0002623;3.35e-08;3!CL:0000362;6.23e-08;9!CL:0000312;5.65e-07;5 | |ontology_enrichment_celltype_v019=CL:0000150;5.32e-12;9!CL:0000622;1.07e-11;5!CL:0002251;4.43e-10;20!CL:0000154;1.12e-09;6!CL:0002076;1.56e-09;42!CL:0002077;1.77e-09;34!CL:0000240;1.12e-08;6!CL:0000311;1.12e-08;6!CL:0000079;1.12e-08;6!CL:0000237;1.12e-08;6!CL:0000148;1.29e-08;10!CL:0002159;1.50e-08;14!CL:0002623;3.35e-08;3!CL:0000362;6.23e-08;9!CL:0000312;5.65e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.20e-12,42;CL:0000150,6.61e-12,9;CL:0000622,9.41e-12,5;CL:0000223,2.31e-11,58;CL:0002251,4.28e-10,20;CL:0002077,6.34e-10,34;CL:0000154,1.01e-09,6;CL:0000148,1.15e-08,10;CL:0000541,1.15e-08,10;CL:0000240,1.42e-08,6;CL:0000311,1.42e-08,6;CL:0000079,1.42e-08,6;CL:0000237,1.42e-08,6;CL:0000036,1.42e-08,6;CL:0000357,1.42e-08,6;CL:0000114,1.42e-08,6;CL:0002159,1.69e-08,14;CL:0000221,2.23e-08,72;CL:0002623,3.46e-08,3;CL:0000362,6.26e-08,9;CL:0000333,8.99e-08,41;CL:0000312,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;1.12e-08;6!CL:0000114;1.12e-08;6!CL:0000223;2.80e-07;58 | |ontology_enrichment_development_v019=CL:0000357;1.12e-08;6!CL:0000114;1.12e-08;6!CL:0000223;2.80e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;4.17e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;4.17e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,4.34e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.50e-27!115;UBERON:0001049!1.00e-25!57;UBERON:0005068!1.00e-25!57;UBERON:0006241!1.00e-25!57;UBERON:0007135!1.00e-25!57;UBERON:0000924!1.28e-24!173;UBERON:0006601!1.28e-24!173;UBERON:0004121!3.41e-24!169;UBERON:0000153!1.19e-23!129;UBERON:0007811!1.19e-23!129;UBERON:0001017!2.10e-23!82;UBERON:0000033!3.54e-23!123;UBERON:0005743!8.00e-23!86;UBERON:0000955!1.68e-22!69;UBERON:0006238!1.68e-22!69;UBERON:0000073!3.02e-22!94;UBERON:0001016!3.02e-22!94;UBERON:0002616!1.26e-20!59;UBERON:0002346!5.47e-18!90;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0002780!1.56e-17!41;UBERON:0001890!1.56e-17!41;UBERON:0006240!1.56e-17!41;UBERON:0002020!5.16e-17!34;UBERON:0003528!5.16e-17!34;UBERON:0003080!7.03e-17!42;UBERON:0001893!1.04e-16!34;UBERON:0002791!3.98e-16!33;UBERON:0001869!3.63e-15!32;UBERON:0000956!1.87e-11!25;UBERON:0000203!1.87e-11!25;UBERON:0000475!2.10e-11!365;UBERON:0002619!5.62e-11!22;UBERON:0003056!1.49e-10!61;UBERON:0004111!1.56e-10!241;UBERON:0003076!2.60e-10!15;UBERON:0003057!2.60e-10!15;UBERON:0001950!1.72e-09!20;UBERON:0000161!2.12e-09!35;UBERON:0000477!5.53e-09!286;UBERON:0004733!1.89e-08!12;UBERON:0002028!1.89e-08!12;UBERON:0007277!1.89e-08!12;UBERON:0000166!4.55e-08!21;UBERON:0001004!5.17e-08!72;UBERON:0004732!1.39e-07!13;UBERON:0002308!2.98e-07!9;UBERON:0000125!2.98e-07!9;UBERON:0002420!3.95e-07!9;UBERON:0007245!3.95e-07!9;UBERON:0010009!3.95e-07!9;UBERON:0010011!3.95e-07!9;UBERON:0000454!3.95e-07!9;UBERON:0004119!5.08e-07!169;UBERON:0000925!5.08e-07!169;UBERON:0006595!5.08e-07!169;UBERON:0000165!8.60e-07!28;UBERON:0000930!8.60e-07!28 | |ontology_enrichment_uberon=UBERON:0007023!7.50e-27!115;UBERON:0001049!1.00e-25!57;UBERON:0005068!1.00e-25!57;UBERON:0006241!1.00e-25!57;UBERON:0007135!1.00e-25!57;UBERON:0000924!1.28e-24!173;UBERON:0006601!1.28e-24!173;UBERON:0004121!3.41e-24!169;UBERON:0000153!1.19e-23!129;UBERON:0007811!1.19e-23!129;UBERON:0001017!2.10e-23!82;UBERON:0000033!3.54e-23!123;UBERON:0005743!8.00e-23!86;UBERON:0000955!1.68e-22!69;UBERON:0006238!1.68e-22!69;UBERON:0000073!3.02e-22!94;UBERON:0001016!3.02e-22!94;UBERON:0002616!1.26e-20!59;UBERON:0002346!5.47e-18!90;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0002780!1.56e-17!41;UBERON:0001890!1.56e-17!41;UBERON:0006240!1.56e-17!41;UBERON:0002020!5.16e-17!34;UBERON:0003528!5.16e-17!34;UBERON:0003080!7.03e-17!42;UBERON:0001893!1.04e-16!34;UBERON:0002791!3.98e-16!33;UBERON:0001869!3.63e-15!32;UBERON:0000956!1.87e-11!25;UBERON:0000203!1.87e-11!25;UBERON:0000475!2.10e-11!365;UBERON:0002619!5.62e-11!22;UBERON:0003056!1.49e-10!61;UBERON:0004111!1.56e-10!241;UBERON:0003076!2.60e-10!15;UBERON:0003057!2.60e-10!15;UBERON:0001950!1.72e-09!20;UBERON:0000161!2.12e-09!35;UBERON:0000477!5.53e-09!286;UBERON:0004733!1.89e-08!12;UBERON:0002028!1.89e-08!12;UBERON:0007277!1.89e-08!12;UBERON:0000166!4.55e-08!21;UBERON:0001004!5.17e-08!72;UBERON:0004732!1.39e-07!13;UBERON:0002308!2.98e-07!9;UBERON:0000125!2.98e-07!9;UBERON:0002420!3.95e-07!9;UBERON:0007245!3.95e-07!9;UBERON:0010009!3.95e-07!9;UBERON:0010011!3.95e-07!9;UBERON:0000454!3.95e-07!9;UBERON:0004119!5.08e-07!169;UBERON:0000925!5.08e-07!169;UBERON:0006595!5.08e-07!169;UBERON:0000165!8.60e-07!28;UBERON:0000930!8.60e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0004733;4.65e-13;12!UBERON:0002028;4.65e-13;12!UBERON:0004732;6.41e-12;13!UBERON:0000161;8.73e-09;19!UBERON:0000166;8.73e-09;19!UBERON:0002298;1.12e-08;6!UBERON:0002680;3.00e-08;9!UBERON:0001895;3.00e-08;9!UBERON:0000165;4.63e-08;28!UBERON:0001896;6.10e-07;3!UBERON:0005290;6.10e-07;3!UBERON:0000974;6.93e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004733;4.65e-13;12!UBERON:0002028;4.65e-13;12!UBERON:0004732;6.41e-12;13!UBERON:0000161;8.73e-09;19!UBERON:0000166;8.73e-09;19!UBERON:0002298;1.12e-08;6!UBERON:0002680;3.00e-08;9!UBERON:0001895;3.00e-08;9!UBERON:0000165;4.63e-08;28!UBERON:0001896;6.10e-07;3!UBERON:0005290;6.10e-07;3!UBERON:0000974;6.93e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.44e-14,171;UBERON:0000924,5.44e-14,171;UBERON:0006601,5.44e-14,171;UBERON:0004733,4.70e-13,12;UBERON:0002028,4.70e-13,12;UBERON:0007277,4.70e-13,12;UBERON:0003076,2.09e-12,15;UBERON:0003057,2.09e-12,15;UBERON:0004732,6.47e-12,13;UBERON:0010371,1.79e-09,104;UBERON:0000166,4.39e-09,22;UBERON:0002298,7.80e-09,6;UBERON:0011216,1.31e-08,223;UBERON:0000161,2.02e-08,36;UBERON:0007023,2.26e-08,114;UBERON:0000955,2.93e-08,68;UBERON:0006238,2.93e-08,68;UBERON:0002680,3.24e-08,9;UBERON:0001895,3.24e-08,9;UBERON:0010092,3.24e-08,9;UBERON:0000165,1.16e-07,29;UBERON:0000930,1.16e-07,29;UBERON:0001049,1.46e-07,56;UBERON:0005068,1.46e-07,56;UBERON:0006241,1.46e-07,56;UBERON:0007135,1.46e-07,56;UBERON:0001016,1.76e-07,89;UBERON:0003102,3.26e-07,99;UBERON:0000073,3.33e-07,53;UBERON:0002616,3.33e-07,53;UBERON:0001896,5.50e-07,3;UBERON:0005290,5.50e-07,3;UBERON:0010096,5.50e-07,3;UBERON:0001017,5.55e-07,81 | |||
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| ||
|short_description=p3@MCC | |short_description=p3@MCC | ||
}} | }} |
Revision as of 22:48, 17 November 2012
Short description: | p3@MCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MCC_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000511847_5end |
EntrezGene: | MCC |
HGNC: | 6935 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.20e-12 | 42 |
glandular epithelial cell | 6.61e-12 | 9 |
acinar cell | 9.41e-12 | 5 |
endodermal cell | 2.31e-11 | 58 |
epithelial cell of alimentary canal | 4.28e-10 | 20 |
ecto-epithelial cell | 6.34e-10 | 34 |
protein secreting cell | 1.01e-09 | 6 |
melanocyte | 1.15e-08 | 10 |
melanoblast | 1.15e-08 | 10 |
stratified squamous epithelial cell | 1.42e-08 | 6 |
keratin accumulating cell | 1.42e-08 | 6 |
stratified epithelial cell | 1.42e-08 | 6 |
keratinizing barrier epithelial cell | 1.42e-08 | 6 |
epithelial fate stem cell | 1.42e-08 | 6 |
stratified epithelial stem cell | 1.42e-08 | 6 |
surface ectodermal cell | 1.42e-08 | 6 |
general ecto-epithelial cell | 1.69e-08 | 14 |
ectodermal cell | 2.23e-08 | 72 |
acinar cell of salivary gland | 3.46e-08 | 3 |
epidermal cell | 6.26e-08 | 9 |
migratory neural crest cell | 8.99e-08 | 41 |
keratinocyte | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.44e-14 | 171 |
ectoderm | 5.44e-14 | 171 |
presumptive ectoderm | 5.44e-14 | 171 |
segmental subdivision of hindbrain | 4.70e-13 | 12 |
hindbrain | 4.70e-13 | 12 |
presumptive hindbrain | 4.70e-13 | 12 |
posterior neural tube | 2.09e-12 | 15 |
chordal neural plate | 2.09e-12 | 15 |
segmental subdivision of nervous system | 6.47e-12 | 13 |
ecto-epithelium | 1.79e-09 | 104 |
oral opening | 4.39e-09 | 22 |
brainstem | 7.80e-09 | 6 |
organ system subdivision | 1.31e-08 | 223 |
orifice | 2.02e-08 | 36 |
adult organism | 2.26e-08 | 114 |
brain | 2.93e-08 | 68 |
future brain | 2.93e-08 | 68 |
regional part of metencephalon | 3.24e-08 | 9 |
metencephalon | 3.24e-08 | 9 |
future metencephalon | 3.24e-08 | 9 |
mouth | 1.16e-07 | 29 |
stomodeum | 1.16e-07 | 29 |
neural tube | 1.46e-07 | 56 |
neural rod | 1.46e-07 | 56 |
future spinal cord | 1.46e-07 | 56 |
neural keel | 1.46e-07 | 56 |
nervous system | 1.76e-07 | 89 |
surface structure | 3.26e-07 | 99 |
regional part of nervous system | 3.33e-07 | 53 |
regional part of brain | 3.33e-07 | 53 |
medulla oblongata | 5.50e-07 | 3 |
myelencephalon | 5.50e-07 | 3 |
future myelencephalon | 5.50e-07 | 3 |
central nervous system | 5.55e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.34e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.