Coexpression cluster:C4273: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 5: | Line 5: | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-69!115;UBERON:0001049!2.77e-49!57;UBERON:0005068!2.77e-49!57;UBERON:0006241!2.77e-49!57;UBERON:0007135!2.77e-49!57;UBERON:0001017!4.89e-46!82;UBERON:0005743!1.27e-44!86;UBERON:0002616!7.10e-44!59;UBERON:0000073!1.06e-41!94;UBERON:0001016!1.06e-41!94;UBERON:0003080!3.10e-40!42;UBERON:0002346!9.17e-40!90;UBERON:0002780!9.85e-40!41;UBERON:0001890!9.85e-40!41;UBERON:0006240!9.85e-40!41;UBERON:0000955!9.55e-39!69;UBERON:0006238!9.55e-39!69;UBERON:0003075!2.67e-38!86;UBERON:0007284!2.67e-38!86;UBERON:0001893!2.80e-34!34;UBERON:0002020!5.12e-34!34;UBERON:0003528!5.12e-34!34;UBERON:0002791!3.09e-33!33;UBERON:0001869!1.71e-32!32;UBERON:0000924!1.74e-30!173;UBERON:0006601!1.74e-30!173;UBERON:0000153!2.43e-29!129;UBERON:0007811!2.43e-29!129;UBERON:0004121!4.89e-29!169;UBERON:0003056!5.48e-29!61;UBERON:0000033!1.19e-27!123;UBERON:0000956!2.57e-25!25;UBERON:0000203!2.57e-25!25;UBERON:0002619!5.87e-24!22;UBERON:0001950!1.18e-21!20;UBERON:0004111!6.58e-14!241;UBERON:0000477!1.15e-12!286;UBERON:0000922!2.85e-12!612;UBERON:0000062!2.88e-12!511;UBERON:0000025!2.10e-11!194;UBERON:0000064!2.33e-11!219;UBERON:0000468!8.31e-11!659;UBERON:0000481!1.06e-10!347;UBERON:0002420!1.69e-10!9;UBERON:0007245!1.69e-10!9;UBERON:0010009!1.69e-10!9;UBERON:0010011!1.69e-10!9;UBERON:0000454!1.69e-10!9;UBERON:0003076!3.34e-10!15;UBERON:0003057!3.34e-10!15;UBERON:0002308!4.60e-10!9;UBERON:0000125!4.60e-10!9;UBERON:0002050!9.89e-10!605;UBERON:0005423!9.89e-10!605;UBERON:0000475!2.13e-09!365;UBERON:0001871!2.33e-09!7;UBERON:0000923!2.38e-09!604;UBERON:0005291!2.38e-09!604;UBERON:0006598!2.38e-09!604;UBERON:0002532!2.38e-09!604;UBERON:0002298!2.23e-08!8;UBERON:0004732!2.39e-08!13;UBERON:0009663!2.56e-08!7;UBERON:0000467!3.88e-08!625;UBERON:0000480!4.74e-08!626;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0000200!2.06e-07!6;UBERON:0000349!3.65e-07!5;UBERON:0001894!7.95e-07!7;UBERON:0006222!7.95e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.29e-69!115;UBERON:0001049!2.77e-49!57;UBERON:0005068!2.77e-49!57;UBERON:0006241!2.77e-49!57;UBERON:0007135!2.77e-49!57;UBERON:0001017!4.89e-46!82;UBERON:0005743!1.27e-44!86;UBERON:0002616!7.10e-44!59;UBERON:0000073!1.06e-41!94;UBERON:0001016!1.06e-41!94;UBERON:0003080!3.10e-40!42;UBERON:0002346!9.17e-40!90;UBERON:0002780!9.85e-40!41;UBERON:0001890!9.85e-40!41;UBERON:0006240!9.85e-40!41;UBERON:0000955!9.55e-39!69;UBERON:0006238!9.55e-39!69;UBERON:0003075!2.67e-38!86;UBERON:0007284!2.67e-38!86;UBERON:0001893!2.80e-34!34;UBERON:0002020!5.12e-34!34;UBERON:0003528!5.12e-34!34;UBERON:0002791!3.09e-33!33;UBERON:0001869!1.71e-32!32;UBERON:0000924!1.74e-30!173;UBERON:0006601!1.74e-30!173;UBERON:0000153!2.43e-29!129;UBERON:0007811!2.43e-29!129;UBERON:0004121!4.89e-29!169;UBERON:0003056!5.48e-29!61;UBERON:0000033!1.19e-27!123;UBERON:0000956!2.57e-25!25;UBERON:0000203!2.57e-25!25;UBERON:0002619!5.87e-24!22;UBERON:0001950!1.18e-21!20;UBERON:0004111!6.58e-14!241;UBERON:0000477!1.15e-12!286;UBERON:0000922!2.85e-12!612;UBERON:0000062!2.88e-12!511;UBERON:0000025!2.10e-11!194;UBERON:0000064!2.33e-11!219;UBERON:0000468!8.31e-11!659;UBERON:0000481!1.06e-10!347;UBERON:0002420!1.69e-10!9;UBERON:0007245!1.69e-10!9;UBERON:0010009!1.69e-10!9;UBERON:0010011!1.69e-10!9;UBERON:0000454!1.69e-10!9;UBERON:0003076!3.34e-10!15;UBERON:0003057!3.34e-10!15;UBERON:0002308!4.60e-10!9;UBERON:0000125!4.60e-10!9;UBERON:0002050!9.89e-10!605;UBERON:0005423!9.89e-10!605;UBERON:0000475!2.13e-09!365;UBERON:0001871!2.33e-09!7;UBERON:0000923!2.38e-09!604;UBERON:0005291!2.38e-09!604;UBERON:0006598!2.38e-09!604;UBERON:0002532!2.38e-09!604;UBERON:0002298!2.23e-08!8;UBERON:0004732!2.39e-08!13;UBERON:0009663!2.56e-08!7;UBERON:0000467!3.88e-08!625;UBERON:0000480!4.74e-08!626;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0000200!2.06e-07!6;UBERON:0000349!3.65e-07!5;UBERON:0001894!7.95e-07!7;UBERON:0006222!7.95e-07!7 | ||
|tf_chipseq_enrich=YY1#7528;3:4.91117074985386:0.00844145534180826:0.0330354537581262 | |||
|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.00156205,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.000504333,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.0175714,0.111283,0.121201,0.154071,0.0541794,0.00252127,0.0929951,0.00153794,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.0117644,0.108602,0.0759481,0.054569,0.0504887,0.00989266,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.0472875,0.0347684,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.0594776,0.0124568,0.0927458,0.27413,0.0574857,0.0422457,0.141874,0.000695613,0.0259741,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.0101452,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.0223702,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.000155255,0.116642,0.147788,0.273479,0.114283,0.0400322,0.00847953,0.0403542,0.312091,0.179689,0.137725,0.0255071,0.0541353,0.0799324,0.090079,0.140334,0.0176328,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.00127354,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.0042906,0.15185,0.0229156,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.0133328,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.21774,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.0429376,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.059488,0.713218,0.198118,0.635872,0.051522,0.0986134,0.807281,0.335423,0.629514,0.261553,0.446302,0.373681,0.309233,0.0313047,0.0619618,0.395854,0.329568,0.53472,0.615744,0.271958,0.292154,0.405773,0.39729,0.000290219,0.597171,0.187251,0.362792,2.28809e-06,0.423979,0.109988,0.330894,0.218329,0.427027,0.0821552,0.00381454,0.0883629,0.00734087,0.03861,0.0792797,0.415647,0.484505,0.253571,0.276829,0.301787,0.481778,0.0565541,0.223503,0.503224,0.0669244,0.283727,0.314747,0.0116619,0.291709,3.68979e-05,0.576651,0.0175396,0.0478086,0.476744,0.439556,0.373868,0.57762,0.608919,0.18237,0.706298,0.821217,0.0512465,0.275351,0.236471,0.185661,0.346319,0.0427964,0.00415948,0.00341096,0.503058,0.513852,0.169228,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.762864,0.00204647,0.412837,0.00570056,0.546839,0.551561,0.120021,0.218623,0.312808,0.117923,0.0451077,0.0747529,0.0284893,0.0897888,0.00223439,0.50215,0.294698,0.34331,0.138202,0.289204,0.0077225,0.319027,0.278044,0.807485,0.428671,0.228096,0.0642385,0.19763,0.15631,0.0530502,0.421464,0.141711,0.420626,0.165111,0.858756,0.0637439,0.144809,0.145539,0.08628,0.376191,0.447325,0.127215,0.252232,0.0122989,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.18767,0.293698,0.284593,0.343734,0.306556,0.305777,0.601433,0.155572,0.522888,0.284629,0.00375279,0.010587,0.226257,0.405955,0.41707,0.00121543,0.464871,0.40841,0.206222,0.00103554,0.0224921,0.437176,0.269226,0.339277,0.192529,0.281425,0.141758,0.455379,0.168058,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.347298,0.182325,0.0699395,0.136757,0.00199596,0.273024,0.0793778,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.381386,0.0179103,0.303939,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.00643465,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.166024,0.009894,0.0145999,0.0656973,0.211746,0.220538,0.0801488,7.69244e-05,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.0178982,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.0254773,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.28711,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.112518,0.120459,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.0109165,0.0340203,0.0741807,0.0425274,0.739716,0.0232393,0.21727,0.289306,0.000310064,0.192475,0.177967,0.547859,0.057571,0.047591,0.392974,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.911304,0.936279,0.206454,0.218192,0.108277,0.0673484,0.000233345,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.0121199,0.0626744,0.191335,0.148574,0.504592,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.00141547,0.137219,0.228144,0.251466,0.0050797,0.11903,0.0838874,0.00806892,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.407281,0.619906,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.418146,0.36927,0.120614,0.0973145,0.231447,0.544776,2.61435e-06,0.00131691,0.0189483,0.448797,0.0209277,0.396996,0.36145,0.406019,0.381071,0.057779,0.643768,0.000302291,0.722159,0.390366,0.48809,0.153829,0.443185,1.15888e-06,0.3468,0.871256,0.227104,0.518585,0.0734371,0.38649,0.00488219,0.504757,0.192225,0.375373,0.28907,0.164197,0.0252589,0.287881,0.574635,0.478174,0.336276,0.468444,0.00355636,0.0222932,0.243383,0.191695,0.390974,0.382874,0.319063,0.161598,0.405056,0.644754,0.150692,0.799185,0.37357,0.200632,0.477353,0.78384,0.399222,0.771991,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.00677445,0.354789,0.163828,0.00246909,0.120226,0.28424,0.562405,0.314429,0.181415,0.282286,0.446891,0.24884,0.408413,0.516511,0.322213,0.656109,0.00873429,0.243065,0.387276,0.522605,0.802166,0.537348,0.222037,0.0175112,0.416292,0.462712,0.148994,0.579431,0.204817,0.452428,0.138871,0.673493,0.0147755,0.19783,0.0833851,0.316453,0.140384,0.175199,0.0628556,0.373557,0.170369,0.408861,0.365487,0.534741,0.39088,0.363192,0.0303438,0.203486,0.0413386,0.0816179,0.4466,0.351067,0.275347,0.0830022,0.0524515,0.241132,0.371414,0.30666,0.303709,0.495883,0.386538,0.508064,0.250964,0.383276,0.00360665,0.504711,0.220231,0.509064,0.196976,0.191517,0.463751,0.0663581,0.0529819,0.459728,0.044623,0.0517073,0.0272975,0.399569,0.0413011,0.368095,0.0418805,0.384593,0.0283414,0.0740334,0.339729,0.197805,0.0690807,0.387069,0.0627969,0.52832,0.299887,0.634365,0.205413,0.17639,0.0779009,0.0424553,0.205298,0.0337138,0.18966,0.00358475,0.188263,0.0719199,0.00386277,0.162568,0.19104,0.163057,0.000128819,0.00177656,5.77224e-08,0.0953646,0.166124,0.252184,0.012591,0.0358457,0.20753,0.0224033,0.179412,0.0200828,0.220904,0.222977,0.341681,0.310674,0.21801,0.0015337,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.0172483,0.226869,0.27872,0.0855609,0.131118,0.20837,0.00310436,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.00080862,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.0398662,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.0251995,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,1.26764e-05,0.115972,0.000142373,0.0030448,0.173026,0.200432,0.000508432,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.000975743,0.176789,0.000163687,0.202137,0.310405,0.00467879,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,1.47932e-05,0.066952,0.089609,0.0367455,0.00954842,0.204393,0.295769,0.286691,0.0687209,0.141729,0.263159,0.00345643,0.200105,0.0280973,0.00569858,0.253509,0.00107794,0.28365,0.000290199,0.131761,0.160658,0.206239,0.0213159,0.00501043,0.236464,0.325148,0.000283503,0.218052,0.223831,0.11528,0.194982,0.00135479,0.281727,0.283218,0.249955,0.164638,0.0272695,0.0935776,0.00776295,0.225752,0.00177054,0.0958756,0.0859274,0.316866,0.171683,1.11776e-06,0.00417402,0.00259055,0.270604,0.101021,0.00220393,0.175934,0.157274,0.215705,0.252796,0.205954,0.0107847 | |tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.00156205,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.000504333,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.0175714,0.111283,0.121201,0.154071,0.0541794,0.00252127,0.0929951,0.00153794,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.0117644,0.108602,0.0759481,0.054569,0.0504887,0.00989266,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.0472875,0.0347684,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.0594776,0.0124568,0.0927458,0.27413,0.0574857,0.0422457,0.141874,0.000695613,0.0259741,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.0101452,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.0223702,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.000155255,0.116642,0.147788,0.273479,0.114283,0.0400322,0.00847953,0.0403542,0.312091,0.179689,0.137725,0.0255071,0.0541353,0.0799324,0.090079,0.140334,0.0176328,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.00127354,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.0042906,0.15185,0.0229156,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.0133328,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.21774,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.0429376,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.059488,0.713218,0.198118,0.635872,0.051522,0.0986134,0.807281,0.335423,0.629514,0.261553,0.446302,0.373681,0.309233,0.0313047,0.0619618,0.395854,0.329568,0.53472,0.615744,0.271958,0.292154,0.405773,0.39729,0.000290219,0.597171,0.187251,0.362792,2.28809e-06,0.423979,0.109988,0.330894,0.218329,0.427027,0.0821552,0.00381454,0.0883629,0.00734087,0.03861,0.0792797,0.415647,0.484505,0.253571,0.276829,0.301787,0.481778,0.0565541,0.223503,0.503224,0.0669244,0.283727,0.314747,0.0116619,0.291709,3.68979e-05,0.576651,0.0175396,0.0478086,0.476744,0.439556,0.373868,0.57762,0.608919,0.18237,0.706298,0.821217,0.0512465,0.275351,0.236471,0.185661,0.346319,0.0427964,0.00415948,0.00341096,0.503058,0.513852,0.169228,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.762864,0.00204647,0.412837,0.00570056,0.546839,0.551561,0.120021,0.218623,0.312808,0.117923,0.0451077,0.0747529,0.0284893,0.0897888,0.00223439,0.50215,0.294698,0.34331,0.138202,0.289204,0.0077225,0.319027,0.278044,0.807485,0.428671,0.228096,0.0642385,0.19763,0.15631,0.0530502,0.421464,0.141711,0.420626,0.165111,0.858756,0.0637439,0.144809,0.145539,0.08628,0.376191,0.447325,0.127215,0.252232,0.0122989,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.18767,0.293698,0.284593,0.343734,0.306556,0.305777,0.601433,0.155572,0.522888,0.284629,0.00375279,0.010587,0.226257,0.405955,0.41707,0.00121543,0.464871,0.40841,0.206222,0.00103554,0.0224921,0.437176,0.269226,0.339277,0.192529,0.281425,0.141758,0.455379,0.168058,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.347298,0.182325,0.0699395,0.136757,0.00199596,0.273024,0.0793778,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.381386,0.0179103,0.303939,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.00643465,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.166024,0.009894,0.0145999,0.0656973,0.211746,0.220538,0.0801488,7.69244e-05,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.0178982,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.0254773,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.28711,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.112518,0.120459,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.0109165,0.0340203,0.0741807,0.0425274,0.739716,0.0232393,0.21727,0.289306,0.000310064,0.192475,0.177967,0.547859,0.057571,0.047591,0.392974,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.911304,0.936279,0.206454,0.218192,0.108277,0.0673484,0.000233345,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.0121199,0.0626744,0.191335,0.148574,0.504592,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.00141547,0.137219,0.228144,0.251466,0.0050797,0.11903,0.0838874,0.00806892,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.407281,0.619906,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.418146,0.36927,0.120614,0.0973145,0.231447,0.544776,2.61435e-06,0.00131691,0.0189483,0.448797,0.0209277,0.396996,0.36145,0.406019,0.381071,0.057779,0.643768,0.000302291,0.722159,0.390366,0.48809,0.153829,0.443185,1.15888e-06,0.3468,0.871256,0.227104,0.518585,0.0734371,0.38649,0.00488219,0.504757,0.192225,0.375373,0.28907,0.164197,0.0252589,0.287881,0.574635,0.478174,0.336276,0.468444,0.00355636,0.0222932,0.243383,0.191695,0.390974,0.382874,0.319063,0.161598,0.405056,0.644754,0.150692,0.799185,0.37357,0.200632,0.477353,0.78384,0.399222,0.771991,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.00677445,0.354789,0.163828,0.00246909,0.120226,0.28424,0.562405,0.314429,0.181415,0.282286,0.446891,0.24884,0.408413,0.516511,0.322213,0.656109,0.00873429,0.243065,0.387276,0.522605,0.802166,0.537348,0.222037,0.0175112,0.416292,0.462712,0.148994,0.579431,0.204817,0.452428,0.138871,0.673493,0.0147755,0.19783,0.0833851,0.316453,0.140384,0.175199,0.0628556,0.373557,0.170369,0.408861,0.365487,0.534741,0.39088,0.363192,0.0303438,0.203486,0.0413386,0.0816179,0.4466,0.351067,0.275347,0.0830022,0.0524515,0.241132,0.371414,0.30666,0.303709,0.495883,0.386538,0.508064,0.250964,0.383276,0.00360665,0.504711,0.220231,0.509064,0.196976,0.191517,0.463751,0.0663581,0.0529819,0.459728,0.044623,0.0517073,0.0272975,0.399569,0.0413011,0.368095,0.0418805,0.384593,0.0283414,0.0740334,0.339729,0.197805,0.0690807,0.387069,0.0627969,0.52832,0.299887,0.634365,0.205413,0.17639,0.0779009,0.0424553,0.205298,0.0337138,0.18966,0.00358475,0.188263,0.0719199,0.00386277,0.162568,0.19104,0.163057,0.000128819,0.00177656,5.77224e-08,0.0953646,0.166124,0.252184,0.012591,0.0358457,0.20753,0.0224033,0.179412,0.0200828,0.220904,0.222977,0.341681,0.310674,0.21801,0.0015337,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.0172483,0.226869,0.27872,0.0855609,0.131118,0.20837,0.00310436,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.00080862,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.0398662,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.0251995,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,1.26764e-05,0.115972,0.000142373,0.0030448,0.173026,0.200432,0.000508432,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.000975743,0.176789,0.000163687,0.202137,0.310405,0.00467879,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,1.47932e-05,0.066952,0.089609,0.0367455,0.00954842,0.204393,0.295769,0.286691,0.0687209,0.141729,0.263159,0.00345643,0.200105,0.0280973,0.00569858,0.253509,0.00107794,0.28365,0.000290199,0.131761,0.160658,0.206239,0.0213159,0.00501043,0.236464,0.325148,0.000283503,0.218052,0.223831,0.11528,0.194982,0.00135479,0.281727,0.283218,0.249955,0.164638,0.0272695,0.0935776,0.00776295,0.225752,0.00177054,0.0958756,0.0859274,0.316866,0.171683,1.11776e-06,0.00417402,0.00259055,0.270604,0.101021,0.00220393,0.175934,0.157274,0.215705,0.252796,0.205954,0.0107847 | ||
}} | }} |
Revision as of 12:31, 5 September 2012
Full id: C4273_ductus_epididymis_seminal_parotid_hippocampus_retina_submaxillary
Phase1 CAGE Peaks
Hg19::chr3:121613224..121613254,+ | p2@SLC15A2 |
Hg19::chr3:121613265..121613295,+ | p1@SLC15A2 |
Hg19::chr3:121613301..121613313,+ | p3@SLC15A2 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
{{{tfbs_overrepresentation_jaspar}}} |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
YY1#7528 | 3 | 4.91117074985386 | 0.00844145534180826 | 0.0330354537581262 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.