FFCP PHASE1:Hg19::chr1:170633194..170633205,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.03e-28!180;CL:0000057!1.27e-20!75;CL:0002620!6.54e-13!23;CL:0000680!1.58e-12!57;CL:0000056!1.58e-12!57;CL:0000355!1.58e-12!57;CL:0000187!1.92e-11!54;CL:0000183!1.33e-10!59;CL:0000393!9.92e-10!60;CL:0000211!9.92e-10!60;CL:0000192!1.70e-07!42;CL:0000514!1.70e-07!42;CL:0000359!4.22e-07!32;CL:0002334!7.35e-07!12 | |ontology_enrichment_celltype=CL:0000055!5.03e-28!180;CL:0000057!1.27e-20!75;CL:0002620!6.54e-13!23;CL:0000680!1.58e-12!57;CL:0000056!1.58e-12!57;CL:0000355!1.58e-12!57;CL:0000187!1.92e-11!54;CL:0000183!1.33e-10!59;CL:0000393!9.92e-10!60;CL:0000211!9.92e-10!60;CL:0000192!1.70e-07!42;CL:0000514!1.70e-07!42;CL:0000359!4.22e-07!32;CL:0002334!7.35e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.99e-13;23!CL:0000057;2.69e-09;73!CL:0002556;7.54e-09;6!CL:0002551;8.93e-09;6 | |ontology_enrichment_celltype_v019=CL:0002620;1.99e-13;23!CL:0000057;2.69e-09;73!CL:0002556;7.54e-09;6!CL:0002551;8.93e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.70e-22,76;CL:0002620,9.46e-14,23;CL:0000048,1.40e-09,427;CL:0000723,3.98e-09,433;CL:0002551,5.83e-09,6;CL:0002556,6.47e-09,6;CL:0000034,1.52e-08,441;CL:0000569,5.85e-07,4;CL:0000011,5.85e-07,4;CL:0000134,6.44e-07,354 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.92e-20!83;UBERON:0002329!1.92e-20!83;UBERON:0003077!1.92e-20!83;UBERON:0003059!1.92e-20!83;UBERON:0007282!1.92e-20!83;UBERON:0009618!1.92e-20!83;UBERON:0007285!1.92e-20!83;UBERON:0004290!8.19e-18!70;UBERON:0000486!5.36e-15!82;UBERON:0003102!8.52e-14!95;UBERON:0001134!9.74e-14!61;UBERON:0002036!9.74e-14!61;UBERON:0003082!9.74e-14!61;UBERON:0002385!1.89e-13!63;UBERON:0001015!1.89e-13!63;UBERON:0000383!1.89e-13!63;UBERON:0000475!1.50e-11!365;UBERON:0002199!1.68e-09!45;UBERON:0002416!1.68e-09!45;UBERON:0005256!8.34e-09!143;UBERON:0002097!2.85e-08!40;UBERON:0000479!2.34e-07!787;UBERON:0000078!4.69e-07!18;UBERON:0000468!9.97e-07!659 | |ontology_enrichment_uberon=UBERON:0000914!1.92e-20!83;UBERON:0002329!1.92e-20!83;UBERON:0003077!1.92e-20!83;UBERON:0003059!1.92e-20!83;UBERON:0007282!1.92e-20!83;UBERON:0009618!1.92e-20!83;UBERON:0007285!1.92e-20!83;UBERON:0004290!8.19e-18!70;UBERON:0000486!5.36e-15!82;UBERON:0003102!8.52e-14!95;UBERON:0001134!9.74e-14!61;UBERON:0002036!9.74e-14!61;UBERON:0003082!9.74e-14!61;UBERON:0002385!1.89e-13!63;UBERON:0001015!1.89e-13!63;UBERON:0000383!1.89e-13!63;UBERON:0000475!1.50e-11!365;UBERON:0002199!1.68e-09!45;UBERON:0002416!1.68e-09!45;UBERON:0005256!8.34e-09!143;UBERON:0002097!2.85e-08!40;UBERON:0000479!2.34e-07!787;UBERON:0000078!4.69e-07!18;UBERON:0000468!9.97e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.67e-09;9!UBERON:0001758;7.54e-09;6!UBERON:0003672;7.54e-09;6!UBERON:0003129;1.87e-07;7!UBERON:0002204;2.12e-07;70!UBERON:0002384;5.58e-07;198!UBERON:0002097;9.85e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002067;1.67e-09;9!UBERON:0001758;7.54e-09;6!UBERON:0003672;7.54e-09;6!UBERON:0003129;1.87e-07;7!UBERON:0002204;2.12e-07;70!UBERON:0002384;5.58e-07;198!UBERON:0002097;9.85e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.24e-13,99;UBERON:0007524,2.63e-10,73;UBERON:0004797,4.57e-10,7;UBERON:0002329,8.09e-10,71;UBERON:0003059,8.09e-10,71;UBERON:0007282,8.09e-10,71;UBERON:0004290,8.09e-10,71;UBERON:0009618,8.09e-10,71;UBERON:0002067,9.19e-10,9;UBERON:0004016,9.19e-10,9;UBERON:0010083,9.19e-10,9;UBERON:0003077,1.41e-09,72;UBERON:0007285,1.41e-09,72;UBERON:0002199,2.85e-09,46;UBERON:0002416,2.85e-09,46;UBERON:0001758,6.47e-09,6;UBERON:0003672,6.47e-09,6;UBERON:0000486,6.81e-09,83;UBERON:0002097,1.13e-08,41;UBERON:0007503,2.88e-08,78;UBERON:0003129,1.64e-07,7;UBERON:0002384,2.42e-07,371;UBERON:0000165,4.09e-07,29;UBERON:0000930,4.09e-07,29 | |||
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| ||
|short_description=p18@PRRX1 | |short_description=p18@PRRX1 | ||
}} | }} |
Revision as of 12:45, 17 November 2012
Short description: | p18@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_PRRX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.70e-22 | 76 |
skin fibroblast | 9.46e-14 | 23 |
multi fate stem cell | 1.40e-09 | 427 |
somatic stem cell | 3.98e-09 | 433 |
fibroblast of dermis | 5.83e-09 | 6 |
fibroblast of periodontium | 6.47e-09 | 6 |
stem cell | 1.52e-08 | 441 |
cardiac mesenchymal cell | 5.85e-07 | 4 |
migratory trunk neural crest cell | 5.85e-07 | 4 |
mesenchymal cell | 6.44e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.24e-13 | 99 |
dense mesenchyme tissue | 2.63e-10 | 73 |
blood vessel layer | 4.57e-10 | 7 |
somite | 8.09e-10 | 71 |
presomitic mesoderm | 8.09e-10 | 71 |
presumptive segmental plate | 8.09e-10 | 71 |
dermomyotome | 8.09e-10 | 71 |
trunk paraxial mesoderm | 8.09e-10 | 71 |
dermis | 9.19e-10 | 9 |
dermatome | 9.19e-10 | 9 |
future dermis | 9.19e-10 | 9 |
paraxial mesoderm | 1.41e-09 | 72 |
presumptive paraxial mesoderm | 1.41e-09 | 72 |
integument | 2.85e-09 | 46 |
integumental system | 2.85e-09 | 46 |
periodontium | 6.47e-09 | 6 |
dentition | 6.47e-09 | 6 |
multilaminar epithelium | 6.81e-09 | 83 |
skin of body | 1.13e-08 | 41 |
epithelial vesicle | 2.88e-08 | 78 |
skull | 1.64e-07 | 7 |
connective tissue | 2.42e-07 | 371 |
mouth | 4.09e-07 | 29 |
stomodeum | 4.09e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.